RNA–Protein interactions for RNA: ENST00000422839.5

SMTN-206, Transcript of smoothelin, humanhuman

TSL 4

Gene SMTN, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-206ENST00000422839 SLC39A6Q13433 755 aa18.4■□□□□ 0.54
SMTN-206ENST00000422839 POLRMTO00411 1230 aaKnown RBP18.39■□□□□ 0.53
SMTN-206ENST00000422839 TM4SF1P30408 202 aa18.39■□□□□ 0.53
SMTN-206ENST00000422839 USPL1Q5W0Q7 1092 aa18.39■□□□□ 0.53
SMTN-206ENST00000422839 NUDCQ9Y266 331 aa18.39■□□□□ 0.53
SMTN-206ENST00000422839 HSPA6P17066 643 aa18.38■□□□□ 0.53
SMTN-206ENST00000422839 ZBTB1Q9Y2K1 713 aa18.38■□□□□ 0.53
SMTN-206ENST00000422839 ARFGEF1Q9Y6D6 1849 aa18.37■□□□□ 0.53
SMTN-206ENST00000422839 BRCA1P38398 1863 aaKnown RBP18.37■□□□□ 0.53
SMTN-206ENST00000422839 KCNA3P22001 575 aa18.37■□□□□ 0.53
SMTN-206ENST00000422839 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
SMTN-206ENST00000422839 NPM2Q86SE8 214 aaKnown RBP18.36■□□□□ 0.53
SMTN-206ENST00000422839 UBR2Q8IWV8 1755 aa18.36■□□□□ 0.53
SMTN-206ENST00000422839 KIF3CO14782 793 aa18.35■□□□□ 0.53
SMTN-206ENST00000422839 NFIXQ14938 502 aa18.35■□□□□ 0.53
SMTN-206ENST00000422839 ZNF790Q6PG37 636 aa18.35■□□□□ 0.53
SMTN-206ENST00000422839 PDZRN3Q9UPQ7 1066 aa18.35■□□□□ 0.53
SMTN-206ENST00000422839 HEG1Q9ULI3 1381 aa18.34■□□□□ 0.53
SMTN-206ENST00000422839 C9orf131Q5VYM1 1079 aa18.34■□□□□ 0.53
SMTN-206ENST00000422839 FMNL2Q96PY5 1086 aa18.34■□□□□ 0.53
SMTN-206ENST00000422839 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.53
SMTN-206ENST00000422839 KDM2BQ8NHM5 1336 aa18.33■□□□□ 0.53
SMTN-206ENST00000422839 ZC3H4Q9UPT8 1303 aaKnown RBP18.33■□□□□ 0.53
SMTN-206ENST00000422839 TOMM70O94826 608 aa18.33■□□□□ 0.52
SMTN-206ENST00000422839 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
SMTN-206ENST00000422839 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
SMTN-206ENST00000422839 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
SMTN-206ENST00000422839 SERPINB2P05120 415 aa18.32■□□□□ 0.52
SMTN-206ENST00000422839 IL17REQ8NFR9 667 aa18.32■□□□□ 0.52
SMTN-206ENST00000422839 ZNF496Q96IT1 587 aaPredicted RBP18.32■□□□□ 0.52
SMTN-206ENST00000422839 CHRNA5P30532 468 aa18.31■□□□□ 0.52
SMTN-206ENST00000422839 PRKAR2BP31323 418 aa18.31■□□□□ 0.52
SMTN-206ENST00000422839 IL6STP40189 918 aaPredicted RBP18.31■□□□□ 0.52
SMTN-206ENST00000422839 RTF1Q92541 710 aaKnown RBP18.31■□□□□ 0.52
SMTN-206ENST00000422839 NRXN2Q9P2S2 1712 aa18.3■□□□□ 0.52
SMTN-206ENST00000422839 APLP1P51693 650 aa18.3■□□□□ 0.52
SMTN-206ENST00000422839 C16orf71Q8IYS4 520 aaPredicted RBP18.3■□□□□ 0.52
SMTN-206ENST00000422839 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
SMTN-206ENST00000422839 RNF181Q9P0P0 153 aa18.3■□□□□ 0.52
SMTN-206ENST00000422839 CEP350Q5VT06 3117 aa18.29■□□□□ 0.52
SMTN-206ENST00000422839 BTBD11A6QL63 1104 aa18.29■□□□□ 0.52
SMTN-206ENST00000422839 H0YIN7 160 aa18.29■□□□□ 0.52
SMTN-206ENST00000422839 TTLL6Q8N841 843 aa18.29■□□□□ 0.52
SMTN-206ENST00000422839 BCL2L12Q9HB09 334 aa18.29■□□□□ 0.52
SMTN-206ENST00000422839 CARMIL3Q8ND23 1372 aa18.29■□□□□ 0.52
SMTN-206ENST00000422839 SIPA1L3O60292 1781 aaPredicted RBP18.28■□□□□ 0.52
SMTN-206ENST00000422839 U2AF1L5P0DN76 240 aaPredicted RBP18.28■□□□□ 0.52
SMTN-206ENST00000422839 U2AF1Q01081 240 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMTN-206ENST00000422839 RBM46Q8TBY0 533 aaKnown RBP18.28■□□□□ 0.52
SMTN-206ENST00000422839 HTATSF1O43719 755 aaKnown RBP18.27■□□□□ 0.52
SMTN-206ENST00000422839 NEFMP07197 916 aa18.27■□□□□ 0.52
SMTN-206ENST00000422839 PDE6BP35913 854 aa18.27■□□□□ 0.52
SMTN-206ENST00000422839 C2CD5Q86YS7 1000 aa18.27■□□□□ 0.52
SMTN-206ENST00000422839 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
SMTN-206ENST00000422839 PPP2R1AP30153 589 aa18.26■□□□□ 0.51
SMTN-206ENST00000422839 NMRK2Q9NPI5 230 aa18.26■□□□□ 0.51
SMTN-206ENST00000422839 ZNF330Q9Y3S2 320 aaPredicted RBP18.26■□□□□ 0.51
SMTN-206ENST00000422839 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
SMTN-206ENST00000422839 NPHP1O15259 732 aa18.25■□□□□ 0.51
SMTN-206ENST00000422839 LMNB1P20700 586 aa18.25■□□□□ 0.51
SMTN-206ENST00000422839 FSTL1Q12841 308 aa18.25■□□□□ 0.51
SMTN-206ENST00000422839 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
SMTN-206ENST00000422839 PHACTR3Q96KR7 559 aa18.25■□□□□ 0.51
SMTN-206ENST00000422839 BRIP1Q9BX63 1249 aa18.25■□□□□ 0.51
SMTN-206ENST00000422839 DLEC1Q9Y238 1755 aa18.25■□□□□ 0.51
SMTN-206ENST00000422839 SETDB2Q96T68 719 aa18.24■□□□□ 0.51
SMTN-206ENST00000422839 ZNF652Q9Y2D9 606 aa18.24■□□□□ 0.51
SMTN-206ENST00000422839 RGL2O15211 777 aa18.23■□□□□ 0.51
SMTN-206ENST00000422839 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
SMTN-206ENST00000422839 ST5P78524 1137 aa18.23■□□□□ 0.51
SMTN-206ENST00000422839 TBC1D9BQ66K14 1250 aa18.23■□□□□ 0.51
SMTN-206ENST00000422839 A1BGP04217 495 aa18.22■□□□□ 0.51
SMTN-206ENST00000422839 CLEC4GQ6UXB4 293 aa18.22■□□□□ 0.51
SMTN-206ENST00000422839 DZIP3Q86Y13 1208 aaKnown RBP18.22■□□□□ 0.51
SMTN-206ENST00000422839 CNBD1Q8NA66 436 aa18.22■□□□□ 0.51
SMTN-206ENST00000422839 TBC1D2BQ9UPU7 963 aa18.22■□□□□ 0.51
SMTN-206ENST00000422839 TNRC6CQ9HCJ0 1690 aaKnown RBP18.22■□□□□ 0.51
SMTN-206ENST00000422839 CAMTA2O94983 1202 aa18.21■□□□□ 0.51
SMTN-206ENST00000422839 SOGA3Q5TF21 947 aa18.21■□□□□ 0.51
SMTN-206ENST00000422839 PRR5LQ6MZQ0 368 aa18.2■□□□□ 0.5
SMTN-206ENST00000422839 ZNF622Q969S3 477 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMTN-206ENST00000422839 PNNQ9H307 717 aaKnown RBP18.2■□□□□ 0.5
SMTN-206ENST00000422839 SBF1O95248 1867 aa18.19■□□□□ 0.5
SMTN-206ENST00000422839 RASSF7Q02833 373 aa18.19■□□□□ 0.5
SMTN-206ENST00000422839 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
SMTN-206ENST00000422839 CNKSR1Q969H4 720 aa18.19■□□□□ 0.5
SMTN-206ENST00000422839 GLTPD2A6NH11 291 aa18.18■□□□□ 0.5
SMTN-206ENST00000422839 KCNQ3O43525 872 aa18.18■□□□□ 0.5
SMTN-206ENST00000422839 TAF7Q15545 349 aaPredicted RBP18.18■□□□□ 0.5
SMTN-206ENST00000422839 STYK1Q6J9G0 422 aa18.18■□□□□ 0.5
SMTN-206ENST00000422839 MCM10Q7L590 875 aa18.18■□□□□ 0.5
SMTN-206ENST00000422839 SMC1BQ8NDV3 1235 aa18.18■□□□□ 0.5
SMTN-206ENST00000422839 RRAGCQ9HB90 399 aa18.17■□□□□ 0.5
SMTN-206ENST00000422839 USP16Q9Y5T5 823 aa18.17■□□□□ 0.5
SMTN-206ENST00000422839 VEGFAP15692 232 aaPredicted RBP18.16■□□□□ 0.5
SMTN-206ENST00000422839 DPY19L2Q6NUT2 758 aa18.16■□□□□ 0.5
SMTN-206ENST00000422839 NBPF5PQ86XG9 351 aaPredicted RBP18.16■□□□□ 0.5
SMTN-206ENST00000422839 MASTLQ96GX5 879 aa18.16■□□□□ 0.5
SMTN-206ENST00000422839 BCORQ6W2J9 1755 aa18.16■□□□□ 0.5
SMTN-206ENST00000422839 LTBP3Q9NS15 1303 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms