RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
TRIM43CP-201ENST00000422468 YBX3P16989 372 aaKnown RBP eCLIP11□□□□□ -0.65
TRIM43CP-201ENST00000422468 CRKLP46109 303 aaKnown RBP11□□□□□ -0.65
TRIM43CP-201ENST00000422468 ZNF784Q8NCA9 323 aaPredicted RBP11□□□□□ -0.65
TRIM43CP-201ENST00000422468 CFAP53Q96M91 514 aa11□□□□□ -0.65
TRIM43CP-201ENST00000422468 SIPA1L3O60292 1781 aaPredicted RBP11□□□□□ -0.65
TRIM43CP-201ENST00000422468 MMP10P09238 476 aa10.99□□□□□ -0.65
TRIM43CP-201ENST00000422468 RFC4P35249 363 aa10.99□□□□□ -0.65
TRIM43CP-201ENST00000422468 CCDC184Q52MB2 194 aa10.99□□□□□ -0.65
TRIM43CP-201ENST00000422468 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
TRIM43CP-201ENST00000422468 KCPQ6ZWJ8 1503 aa10.99□□□□□ -0.65
TRIM43CP-201ENST00000422468 KIAA1551Q9HCM1 1747 aa10.98□□□□□ -0.65
TRIM43CP-201ENST00000422468 DLG5Q8TDM6 1919 aa10.98□□□□□ -0.65
TRIM43CP-201ENST00000422468 GYS1P13807 737 aa10.98□□□□□ -0.65
TRIM43CP-201ENST00000422468 INTS5Q6P9B9 1019 aaKnown RBP10.98□□□□□ -0.65
TRIM43CP-201ENST00000422468 GAS2L2Q8NHY3 880 aa10.98□□□□□ -0.65
TRIM43CP-201ENST00000422468 N4BP2Q86UW6 1770 aaPredicted RBP10.98□□□□□ -0.65
TRIM43CP-201ENST00000422468 GNAT3A8MTJ3 354 aa10.97□□□□□ -0.65
TRIM43CP-201ENST00000422468 SLC39A6Q13433 755 aa10.97□□□□□ -0.65
TRIM43CP-201ENST00000422468 DNAJC10Q8IXB1 793 aa10.97□□□□□ -0.65
TRIM43CP-201ENST00000422468 PHACTR3Q96KR7 559 aa10.97□□□□□ -0.65
TRIM43CP-201ENST00000422468 CCDC87Q9NVE4 849 aa10.97□□□□□ -0.65
TRIM43CP-201ENST00000422468 CYP19A1P11511 503 aaPredicted RBP10.96□□□□□ -0.65
TRIM43CP-201ENST00000422468 VSIG10Q8N0Z9 540 aa10.96□□□□□ -0.65
TRIM43CP-201ENST00000422468 IL17REQ8NFR9 667 aa10.96□□□□□ -0.65
TRIM43CP-201ENST00000422468 SPDYE1Q8NFV5 336 aaPredicted RBP10.96□□□□□ -0.65
TRIM43CP-201ENST00000422468 SPOCK2Q92563 424 aa10.96□□□□□ -0.65
TRIM43CP-201ENST00000422468 RSPH6AQ9H0K4 717 aa10.96□□□□□ -0.65
TRIM43CP-201ENST00000422468 NUDCQ9Y266 331 aa10.96□□□□□ -0.65
TRIM43CP-201ENST00000422468 PARP3Q9Y6F1 533 aa10.96□□□□□ -0.65
TRIM43CP-201ENST00000422468 C10orf71Q711Q0 1435 aa10.95□□□□□ -0.66
TRIM43CP-201ENST00000422468 USP42Q9H9J4 1324 aaKnown RBP10.95□□□□□ -0.66
TRIM43CP-201ENST00000422468 PRKAR2BP31323 418 aa10.95□□□□□ -0.66
TRIM43CP-201ENST00000422468 TEFQ10587 303 aa10.95□□□□□ -0.66
TRIM43CP-201ENST00000422468 SRP68Q9UHB9 627 aaKnown RBP10.95□□□□□ -0.66
TRIM43CP-201ENST00000422468 BRCA1P38398 1863 aaKnown RBP10.95□□□□□ -0.66
TRIM43CP-201ENST00000422468 PXDNLA1KZ92 1463 aa10.94□□□□□ -0.66
TRIM43CP-201ENST00000422468 SOS1Q07889 1333 aaPredicted RBP10.94□□□□□ -0.66
TRIM43CP-201ENST00000422468 U2AF1L5P0DN76 240 aaPredicted RBP10.94□□□□□ -0.66
TRIM43CP-201ENST00000422468 TGFB2P61812 414 aa10.94□□□□□ -0.66
TRIM43CP-201ENST00000422468 U2AF1Q01081 240 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRIM43CP-201ENST00000422468 TTC5Q8N0Z6 440 aa10.94□□□□□ -0.66
TRIM43CP-201ENST00000422468 CEMIPQ8WUJ3 1361 aa10.93□□□□□ -0.66
TRIM43CP-201ENST00000422468 ZPR1O75312 459 aa10.93□□□□□ -0.66
TRIM43CP-201ENST00000422468 FCHSD2O94868 740 aa10.93□□□□□ -0.66
TRIM43CP-201ENST00000422468 AFDNP55196 1824 aaKnown RBP10.93□□□□□ -0.66
TRIM43CP-201ENST00000422468 A0A0G2JLW4 131 aa10.92□□□□□ -0.66
TRIM43CP-201ENST00000422468 STARD3NLO95772 234 aa10.92□□□□□ -0.66
TRIM43CP-201ENST00000422468 ZNF790Q6PG37 636 aa10.92□□□□□ -0.66
TRIM43CP-201ENST00000422468 PLEKHF1Q96S99 279 aa10.92□□□□□ -0.66
TRIM43CP-201ENST00000422468 NARFQ9UHQ1 456 aa10.92□□□□□ -0.66
TRIM43CP-201ENST00000422468 WWC3Q9ULE0 1092 aa10.92□□□□□ -0.66
TRIM43CP-201ENST00000422468 ZBTB1Q9Y2K1 713 aa10.92□□□□□ -0.66
TRIM43CP-201ENST00000422468 ARFGEF1Q9Y6D6 1849 aa10.92□□□□□ -0.66
TRIM43CP-201ENST00000422468 COL15A1P39059 1388 aa10.91□□□□□ -0.66
TRIM43CP-201ENST00000422468 HEG1Q9ULI3 1381 aa10.91□□□□□ -0.66
TRIM43CP-201ENST00000422468 TM4SF1P30408 202 aa10.91□□□□□ -0.66
TRIM43CP-201ENST00000422468 DDR1Q08345 913 aa10.91□□□□□ -0.66
TRIM43CP-201ENST00000422468 USPL1Q5W0Q7 1092 aa10.91□□□□□ -0.66
TRIM43CP-201ENST00000422468 ZNF496Q96IT1 587 aaPredicted RBP10.91□□□□□ -0.66
TRIM43CP-201ENST00000422468 TEX13AQ9BXU3 409 aaPredicted RBP10.91□□□□□ -0.66
TRIM43CP-201ENST00000422468 ADCY9O60503 1353 aa10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 NRXN2Q9P2S2 1712 aa10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 BTBD11A6QL63 1104 aa10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 POLRMTO00411 1230 aaKnown RBP10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 DPEP1P16444 411 aa10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 CANXP27824 592 aaKnown RBP10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 CHRDL2Q6WN34 429 aa10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 REM2Q8IYK8 340 aaPredicted RBP10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 RTF1Q92541 710 aaKnown RBP10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 FMNL2Q96PY5 1086 aa10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 PRKRIP1Q9H875 184 aaPredicted RBP10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 ZBTB47Q9UFB7 747 aaPredicted RBP10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 ATP10DQ9P241 1426 aa10.9□□□□□ -0.66
TRIM43CP-201ENST00000422468 HTATSF1O43719 755 aaKnown RBP10.89□□□□□ -0.67
TRIM43CP-201ENST00000422468 GIGYF1O75420 1035 aaPredicted RBP10.89□□□□□ -0.67
TRIM43CP-201ENST00000422468 PRR29P0C7W0 189 aa10.89□□□□□ -0.67
TRIM43CP-201ENST00000422468 EIF5P55010 431 aaKnown RBP10.89□□□□□ -0.67
TRIM43CP-201ENST00000422468 BCS1LQ9Y276 419 aa10.89□□□□□ -0.67
TRIM43CP-201ENST00000422468 SCN7AQ01118 1682 aa10.89□□□□□ -0.67
TRIM43CP-201ENST00000422468 DLEC1Q9Y238 1755 aa10.88□□□□□ -0.67
TRIM43CP-201ENST00000422468 A0A087WZG4 1122 aa10.88□□□□□ -0.67
TRIM43CP-201ENST00000422468 KCNQ3O43525 872 aa10.88□□□□□ -0.67
TRIM43CP-201ENST00000422468 KCNA3P22001 575 aa10.88□□□□□ -0.67
TRIM43CP-201ENST00000422468 C1QTNF8P60827 252 aa10.88□□□□□ -0.67
TRIM43CP-201ENST00000422468 NFIXQ14938 502 aa10.88□□□□□ -0.67
TRIM43CP-201ENST00000422468 MCM10Q7L590 875 aa10.88□□□□□ -0.67
TRIM43CP-201ENST00000422468 BCL2L12Q9HB09 334 aa10.88□□□□□ -0.67
TRIM43CP-201ENST00000422468 NEFMP07197 916 aa10.87□□□□□ -0.67
TRIM43CP-201ENST00000422468 IL6STP40189 918 aaPredicted RBP10.87□□□□□ -0.67
TRIM43CP-201ENST00000422468 DCTN1Q14203 1278 aa10.87□□□□□ -0.67
TRIM43CP-201ENST00000422468 PIM2Q9P1W9 311 aa10.87□□□□□ -0.67
TRIM43CP-201ENST00000422468 BCORQ6W2J9 1755 aa10.86□□□□□ -0.67
TRIM43CP-201ENST00000422468 KDM3BQ7LBC6 1761 aa10.86□□□□□ -0.67
TRIM43CP-201ENST00000422468 DALRD3Q5D0E6 543 aaKnown RBP10.86□□□□□ -0.67
TRIM43CP-201ENST00000422468 ARHGAP27Q6ZUM4 889 aa10.86□□□□□ -0.67
TRIM43CP-201ENST00000422468 GPBP1L1Q9HC44 474 aaPredicted RBP10.86□□□□□ -0.67
TRIM43CP-201ENST00000422468 MYBBP1AQ9BQG0 1328 aaKnown RBP10.85□□□□□ -0.67
TRIM43CP-201ENST00000422468 LAMB4A4D0S4 1761 aa10.85□□□□□ -0.67
TRIM43CP-201ENST00000422468 A1BGP04217 495 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms