RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 KNSTRNQ9Y448 316 aa8.67□□□□□ -1.02
CCR9-204ENST00000422395 MSNP26038 577 aaKnown RBP8.66□□□□□ -1.02
CCR9-204ENST00000422395 CNGB1Q14028 1251 aaPredicted RBP8.66□□□□□ -1.02
CCR9-204ENST00000422395 C14orf37Q86TY3 774 aa8.66□□□□□ -1.02
CCR9-204ENST00000422395 SMAP1Q8IYB5 467 aaPredicted RBP8.66□□□□□ -1.02
CCR9-204ENST00000422395 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCR9-204ENST00000422395 SLKQ9H2G2 1235 aaPredicted RBP8.66□□□□□ -1.02
CCR9-204ENST00000422395 PODXL2Q9NZ53 605 aa8.66□□□□□ -1.02
CCR9-204ENST00000422395 RGS17Q9UGC6 210 aaPredicted RBP8.66□□□□□ -1.02
CCR9-204ENST00000422395 ADAMTS8Q9UP79 889 aa8.66□□□□□ -1.02
CCR9-204ENST00000422395 KIF1BO60333 1816 aa8.66□□□□□ -1.02
CCR9-204ENST00000422395 SHPRHQ149N8 1683 aa8.66□□□□□ -1.02
CCR9-204ENST00000422395 XRN1Q8IZH2 1706 aaKnown RBP8.66□□□□□ -1.02
CCR9-204ENST00000422395 PLEKHH1Q9ULM0 1364 aa8.66□□□□□ -1.02
CCR9-204ENST00000422395 ADAMTS13Q76LX8 1427 aa8.65□□□□□ -1.02
CCR9-204ENST00000422395 NCOA3Q9Y6Q9 1424 aa8.65□□□□□ -1.02
CCR9-204ENST00000422395 NRXN3Q9Y4C0 1643 aa8.65□□□□□ -1.02
CCR9-204ENST00000422395 CT47B1P0C2W7 299 aaPredicted RBP8.65□□□□□ -1.02
CCR9-204ENST00000422395 CANXP27824 592 aaKnown RBP8.65□□□□□ -1.02
CCR9-204ENST00000422395 KMT5BQ4FZB7 885 aa8.65□□□□□ -1.02
CCR9-204ENST00000422395 ZNF775Q96BV0 537 aaPredicted RBP8.65□□□□□ -1.02
CCR9-204ENST00000422395 PANK3Q9H999 370 aa8.65□□□□□ -1.02
CCR9-204ENST00000422395 SLAIN2Q9P270 581 aa8.65□□□□□ -1.02
CCR9-204ENST00000422395 ASXL1Q8IXJ9 1541 aa8.65□□□□□ -1.02
CCR9-204ENST00000422395 PIK3R4Q99570 1358 aa8.65□□□□□ -1.03
CCR9-204ENST00000422395 JCADQ9P266 1359 aa8.65□□□□□ -1.03
CCR9-204ENST00000422395 AHDC1Q5TGY3 1603 aaPredicted RBP8.64□□□□□ -1.03
CCR9-204ENST00000422395 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
CCR9-204ENST00000422395 PPP2R1AP30153 589 aa8.64□□□□□ -1.03
CCR9-204ENST00000422395 NUTM2DQ5VT03 806 aaPredicted RBP8.64□□□□□ -1.03
CCR9-204ENST00000422395 TBX22Q9Y458 520 aa8.64□□□□□ -1.03
CCR9-204ENST00000422395 KIF16BQ96L93 1317 aa8.64□□□□□ -1.03
CCR9-204ENST00000422395 SETBP1Q9Y6X0 1596 aa8.64□□□□□ -1.03
CCR9-204ENST00000422395 DGAT1O75907 488 aa8.63□□□□□ -1.03
CCR9-204ENST00000422395 CC2D1BQ5T0F9 858 aaKnown RBP8.63□□□□□ -1.03
CCR9-204ENST00000422395 BLOC1S3Q6QNY0 202 aa8.63□□□□□ -1.03
CCR9-204ENST00000422395 SMC5Q8IY18 1101 aa8.63□□□□□ -1.03
CCR9-204ENST00000422395 TESK2Q96S53 571 aa8.63□□□□□ -1.03
CCR9-204ENST00000422395 C22orf23Q9BZE7 217 aa8.63□□□□□ -1.03
CCR9-204ENST00000422395 CLTCL1P53675 1640 aa8.63□□□□□ -1.03
CCR9-204ENST00000422395 DYNC1I1O14576 645 aa8.62□□□□□ -1.03
CCR9-204ENST00000422395 ATF3P18847 181 aa8.62□□□□□ -1.03
CCR9-204ENST00000422395 DNAJB2P25686 324 aa8.62□□□□□ -1.03
CCR9-204ENST00000422395 MLLT3P42568 568 aaPredicted RBP8.62□□□□□ -1.03
CCR9-204ENST00000422395 TNNT2P45379 298 aaPredicted RBP8.62□□□□□ -1.03
CCR9-204ENST00000422395 UTP14CQ5TAP6 766 aaKnown RBP8.62□□□□□ -1.03
CCR9-204ENST00000422395 CLEC17AQ6ZS10 378 aa8.62□□□□□ -1.03
CCR9-204ENST00000422395 KIAA1211Q6ZU35 1233 aa8.62□□□□□ -1.03
CCR9-204ENST00000422395 TTC13Q8NBP0 860 aa8.62□□□□□ -1.03
CCR9-204ENST00000422395 RBM46Q8TBY0 533 aaKnown RBP8.62□□□□□ -1.03
CCR9-204ENST00000422395 NALCNQ8IZF0 1738 aa8.62□□□□□ -1.03
CCR9-204ENST00000422395 NHSL1Q5SYE7 1610 aa8.61□□□□□ -1.03
CCR9-204ENST00000422395 FAM187AA6NFU0 413 aa8.61□□□□□ -1.03
CCR9-204ENST00000422395 ZNF500O60304 480 aaPredicted RBP8.61□□□□□ -1.03
CCR9-204ENST00000422395 SPRYD7Q5W111 196 aa8.61□□□□□ -1.03
CCR9-204ENST00000422395 POTEAQ6S8J7 498 aa8.61□□□□□ -1.03
CCR9-204ENST00000422395 ZNF598Q86UK7 904 aaKnown RBP8.61□□□□□ -1.03
CCR9-204ENST00000422395 C19orf44Q9H6X5 657 aa8.61□□□□□ -1.03
CCR9-204ENST00000422395 DCCP43146 1447 aa8.61□□□□□ -1.03
CCR9-204ENST00000422395 LRP6O75581 1613 aa8.61□□□□□ -1.03
CCR9-204ENST00000422395 IGHDP01880 384 aa8.6□□□□□ -1.03
CCR9-204ENST00000422395 DDIT3P35638 169 aa8.6□□□□□ -1.03
CCR9-204ENST00000422395 RBM25P49756 843 aaKnown RBP8.6□□□□□ -1.03
CCR9-204ENST00000422395 ZNF697Q5TEC3 545 aa8.6□□□□□ -1.03
CCR9-204ENST00000422395 WDR63Q8IWG1 891 aa8.6□□□□□ -1.03
CCR9-204ENST00000422395 ANKLE1Q8NAG6 615 aa8.6□□□□□ -1.03
CCR9-204ENST00000422395 EYA1Q99502 592 aa8.6□□□□□ -1.03
CCR9-204ENST00000422395 PANK2Q9BZ23 570 aa8.6□□□□□ -1.03
CCR9-204ENST00000422395 CHMP4BQ9H444 224 aaKnown RBP8.6□□□□□ -1.03
CCR9-204ENST00000422395 SRCAPQ6ZRS2 3230 aa8.6□□□□□ -1.03
CCR9-204ENST00000422395 PTPRUQ92729 1446 aa8.6□□□□□ -1.03
CCR9-204ENST00000422395 NEXMIFQ5QGS0 1516 aa8.6□□□□□ -1.03
CCR9-204ENST00000422395 TLL1O43897 1013 aa8.59□□□□□ -1.03
CCR9-204ENST00000422395 NASPP49321 788 aaPredicted RBP8.59□□□□□ -1.03
CCR9-204ENST00000422395 RAB3GAP1Q15042 981 aa8.59□□□□□ -1.03
CCR9-204ENST00000422395 MEX3CQ5U5Q3 659 aaKnown RBP8.59□□□□□ -1.03
CCR9-204ENST00000422395 SKAP1Q86WV1 359 aa8.59□□□□□ -1.03
CCR9-204ENST00000422395 NPDC1Q9NQX5 325 aaPredicted RBP8.59□□□□□ -1.03
CCR9-204ENST00000422395 AMOTL2Q9Y2J4 779 aa8.59□□□□□ -1.03
CCR9-204ENST00000422395 SPATA31A6Q5VVP1 1343 aa8.59□□□□□ -1.03
CCR9-204ENST00000422395 POLR3AO14802 1390 aaPredicted RBP8.58□□□□□ -1.04
CCR9-204ENST00000422395 TULP1O00294 542 aaPredicted RBP8.58□□□□□ -1.04
CCR9-204ENST00000422395 S1PR4O95977 384 aa8.58□□□□□ -1.04
CCR9-204ENST00000422395 ZNF445P59923 1031 aa8.58□□□□□ -1.04
CCR9-204ENST00000422395 HDAC1Q13547 482 aaPredicted RBP8.58□□□□□ -1.04
CCR9-204ENST00000422395 CCDC27Q2M243 656 aa8.58□□□□□ -1.04
CCR9-204ENST00000422395 KLHL40Q2TBA0 621 aa8.58□□□□□ -1.04
CCR9-204ENST00000422395 TAF3Q5VWG9 929 aa8.58□□□□□ -1.04
CCR9-204ENST00000422395 GZF1Q9H116 711 aaPredicted RBP8.58□□□□□ -1.04
CCR9-204ENST00000422395 NOL7Q9UMY1 257 aaKnown RBP8.58□□□□□ -1.04
CCR9-204ENST00000422395 EP400Q96L91 3159 aa8.58□□□□□ -1.04
CCR9-204ENST00000422395 PPLO60437 1756 aa8.58□□□□□ -1.04
CCR9-204ENST00000422395 TNFRSF10AO00220 468 aa8.57□□□□□ -1.04
CCR9-204ENST00000422395 NR1I2O75469 434 aa8.57□□□□□ -1.04
CCR9-204ENST00000422395 PRR20EP86478 221 aa8.57□□□□□ -1.04
CCR9-204ENST00000422395 PRR20CP86479 221 aa8.57□□□□□ -1.04
CCR9-204ENST00000422395 PRR20DP86480 221 aa8.57□□□□□ -1.04
CCR9-204ENST00000422395 PRR20BP86481 221 aa8.57□□□□□ -1.04
CCR9-204ENST00000422395 PRR20AP86496 221 aa8.57□□□□□ -1.04
CCR9-204ENST00000422395 MST1RQ04912 1400 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms