RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 SPG7Q9UQ90 795 aa16.75■□□□□ 0.27
CTCFL-203ENST00000422109 FMN2Q9NZ56 1722 aa16.75■□□□□ 0.27
CTCFL-203ENST00000422109 NALCNQ8IZF0 1738 aa16.74■□□□□ 0.27
CTCFL-203ENST00000422109 RNF214Q8ND24 703 aa16.74■□□□□ 0.27
CTCFL-203ENST00000422109 ANP32BQ92688 251 aaKnown RBP16.74■□□□□ 0.27
CTCFL-203ENST00000422109 CWC22Q9HCG8 908 aaKnown RBP16.74■□□□□ 0.27
CTCFL-203ENST00000422109 PA2G4Q9UQ80 394 aaKnown RBP16.74■□□□□ 0.27
CTCFL-203ENST00000422109 SALL3Q9BXA9 1300 aa16.74■□□□□ 0.27
CTCFL-203ENST00000422109 CYP2E1P05181 493 aaPredicted RBP16.74■□□□□ 0.27
CTCFL-203ENST00000422109 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
CTCFL-203ENST00000422109 SYCE3A1L190 88 aa16.74■□□□□ 0.27
CTCFL-203ENST00000422109 PRIM1P49642 420 aaKnown RBP16.74■□□□□ 0.27
CTCFL-203ENST00000422109 DNAAF4Q8WXU2 420 aa16.74■□□□□ 0.27
CTCFL-203ENST00000422109 ORAI2Q96SN7 254 aa16.74■□□□□ 0.27
CTCFL-203ENST00000422109 PROSER3Q2NL68 480 aa16.73■□□□□ 0.27
CTCFL-203ENST00000422109 CWF19L2Q2TBE0 894 aaKnown RBP16.73■□□□□ 0.27
CTCFL-203ENST00000422109 RBSNQ9H1K0 784 aa16.72■□□□□ 0.27
CTCFL-203ENST00000422109 C9orf78Q9NZ63 289 aaPredicted RBP16.72■□□□□ 0.27
CTCFL-203ENST00000422109 IP6K1Q92551 441 aa16.72■□□□□ 0.27
CTCFL-203ENST00000422109 SSH3Q8TE77 659 aa16.71■□□□□ 0.27
CTCFL-203ENST00000422109 TMEM63CQ9P1W3 806 aa16.71■□□□□ 0.26
CTCFL-203ENST00000422109 MAP3K2Q9Y2U5 619 aa16.71■□□□□ 0.26
CTCFL-203ENST00000422109 CLCN1P35523 988 aa16.7■□□□□ 0.26
CTCFL-203ENST00000422109 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
CTCFL-203ENST00000422109 PIP4K2AP48426 406 aaPredicted RBP16.7■□□□□ 0.26
CTCFL-203ENST00000422109 C1orf141Q5JVX7 400 aa16.7■□□□□ 0.26
CTCFL-203ENST00000422109 ZC3H6P61129 1189 aaKnown RBP16.69■□□□□ 0.26
CTCFL-203ENST00000422109 BEND3Q5T5X7 828 aa16.69■□□□□ 0.26
CTCFL-203ENST00000422109 SIL1Q9H173 461 aa16.69■□□□□ 0.26
CTCFL-203ENST00000422109 ISY1Q9ULR0 285 aaKnown RBP16.69■□□□□ 0.26
CTCFL-203ENST00000422109 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
CTCFL-203ENST00000422109 MPNDQ8N594 471 aa16.69■□□□□ 0.26
CTCFL-203ENST00000422109 SLC39A6Q13433 755 aa16.68■□□□□ 0.26
CTCFL-203ENST00000422109 STAP2Q9UGK3 403 aa16.68■□□□□ 0.26
CTCFL-203ENST00000422109 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
CTCFL-203ENST00000422109 RASEFQ8IZ41 740 aa16.68■□□□□ 0.26
CTCFL-203ENST00000422109 PI4K2BQ8TCG2 481 aa16.68■□□□□ 0.26
CTCFL-203ENST00000422109 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
CTCFL-203ENST00000422109 UBE2Q2Q8WVN8 375 aa16.68■□□□□ 0.26
CTCFL-203ENST00000422109 MYL6BP14649 208 aa16.67■□□□□ 0.26
CTCFL-203ENST00000422109 GADD45BO75293 160 aaPredicted RBP16.67■□□□□ 0.26
CTCFL-203ENST00000422109 PLEKHO1Q53GL0 409 aaPredicted RBP16.67■□□□□ 0.26
CTCFL-203ENST00000422109 KLHDC4Q8TBB5 520 aa16.67■□□□□ 0.26
CTCFL-203ENST00000422109 NWD1Q149M9 1564 aa16.67■□□□□ 0.26
CTCFL-203ENST00000422109 ANKLE2Q86XL3 938 aa16.66■□□□□ 0.26
CTCFL-203ENST00000422109 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
CTCFL-203ENST00000422109 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
CTCFL-203ENST00000422109 GCP02774 474 aa16.66■□□□□ 0.26
CTCFL-203ENST00000422109 CCDC173Q0VFZ6 552 aa16.66■□□□□ 0.26
CTCFL-203ENST00000422109 CCDC8Q9H0W5 538 aaPredicted RBP16.66■□□□□ 0.26
CTCFL-203ENST00000422109 DIAPH3Q9NSV4 1193 aa16.66■□□□□ 0.26
CTCFL-203ENST00000422109 ANKRD24Q8TF21 1146 aa16.65■□□□□ 0.26
CTCFL-203ENST00000422109 AXIN2Q9Y2T1 843 aa16.65■□□□□ 0.26
CTCFL-203ENST00000422109 POLA2Q14181 598 aa16.65■□□□□ 0.26
CTCFL-203ENST00000422109 DDX17Q92841 729 aaKnown RBP16.65■□□□□ 0.26
CTCFL-203ENST00000422109 SNX14Q9Y5W7 946 aa16.65■□□□□ 0.26
CTCFL-203ENST00000422109 ARHGAP23Q9P227 1491 aa16.65■□□□□ 0.26
CTCFL-203ENST00000422109 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
CTCFL-203ENST00000422109 RAB11FIP3O75154 756 aa16.65■□□□□ 0.26
CTCFL-203ENST00000422109 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.65■□□□□ 0.26
CTCFL-203ENST00000422109 FAM208AQ9UK61 1670 aaKnown RBP16.64■□□□□ 0.26
CTCFL-203ENST00000422109 BRD1O95696 1058 aa16.64■□□□□ 0.25
CTCFL-203ENST00000422109 IFIT2P09913 472 aaKnown RBP16.64■□□□□ 0.25
CTCFL-203ENST00000422109 CASTP20810 708 aaKnown RBP16.64■□□□□ 0.25
CTCFL-203ENST00000422109 AKAP4Q5JQC9 854 aa16.64■□□□□ 0.25
CTCFL-203ENST00000422109 AACSQ86V21 672 aa16.64■□□□□ 0.25
CTCFL-203ENST00000422109 CLASRPQ8N2M8 674 aaKnown RBP16.64■□□□□ 0.25
CTCFL-203ENST00000422109 SLIT1O75093 1534 aa16.64■□□□□ 0.25
CTCFL-203ENST00000422109 SGSM2O43147 1006 aa16.64■□□□□ 0.25
CTCFL-203ENST00000422109 HSPA4P34932 840 aa16.64■□□□□ 0.25
CTCFL-203ENST00000422109 KCNJ4P48050 445 aa16.64■□□□□ 0.25
CTCFL-203ENST00000422109 AK2P54819 239 aa16.64■□□□□ 0.25
CTCFL-203ENST00000422109 ZNF445P59923 1031 aa16.64■□□□□ 0.25
CTCFL-203ENST00000422109 PRPF40BQ6NWY9 871 aaKnown RBP16.64■□□□□ 0.25
CTCFL-203ENST00000422109 XRN1Q8IZH2 1706 aaKnown RBP16.64■□□□□ 0.25
CTCFL-203ENST00000422109 ADCY9O60503 1353 aa16.64■□□□□ 0.25
CTCFL-203ENST00000422109 MCM2P49736 904 aa16.63■□□□□ 0.25
CTCFL-203ENST00000422109 PTH1RQ03431 593 aa16.63■□□□□ 0.25
CTCFL-203ENST00000422109 DBF4Q9UBU7 674 aaPredicted RBP16.63■□□□□ 0.25
CTCFL-203ENST00000422109 MSNP26038 577 aaKnown RBP16.62■□□□□ 0.25
CTCFL-203ENST00000422109 TCEANC2Q96MN5 208 aa16.62■□□□□ 0.25
CTCFL-203ENST00000422109 CUL4AQ13619 759 aa16.62■□□□□ 0.25
CTCFL-203ENST00000422109 LARGE1O95461 756 aa16.62■□□□□ 0.25
CTCFL-203ENST00000422109 ANAPC15P60006 121 aa16.62■□□□□ 0.25
CTCFL-203ENST00000422109 USP48Q86UV5 1035 aa16.62■□□□□ 0.25
CTCFL-203ENST00000422109 CCDC83Q8IWF9 413 aa16.62■□□□□ 0.25
CTCFL-203ENST00000422109 CEMIPQ8WUJ3 1361 aa16.62■□□□□ 0.25
CTCFL-203ENST00000422109 ANKARQ7Z5J8 1434 aa16.62■□□□□ 0.25
CTCFL-203ENST00000422109 GIGYF1O75420 1035 aaPredicted RBP16.61■□□□□ 0.25
CTCFL-203ENST00000422109 ADCK5Q3MIX3 580 aa16.61■□□□□ 0.25
CTCFL-203ENST00000422109 KCNH5Q8NCM2 988 aa16.61■□□□□ 0.25
CTCFL-203ENST00000422109 JAKMIP1Q96N16 626 aaKnown RBP16.61■□□□□ 0.25
CTCFL-203ENST00000422109 LSG1Q9H089 658 aaKnown RBP16.61■□□□□ 0.25
CTCFL-203ENST00000422109 NLRP2Q9NX02 1062 aa16.61■□□□□ 0.25
CTCFL-203ENST00000422109 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
CTCFL-203ENST00000422109 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
CTCFL-203ENST00000422109 BOLA2Q9H3K6 86 aa16.61■□□□□ 0.25
CTCFL-203ENST00000422109 RAD50Q92878 1312 aa16.6■□□□□ 0.25
CTCFL-203ENST00000422109 FIBPO43427 364 aa16.6■□□□□ 0.25
CTCFL-203ENST00000422109 RIC3Q7Z5B4 369 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms