RNA–Protein interactions for RNA: ENST00000421538.1

LINC00899-201, long intergenic non-protein coding RNA 899, humanhuman

TSL 1 (best)

Gene LINC00899, Length 2,584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-201ENST00000421538 PTMAP06454 111 aaKnown RBP16.99■□□□□ 0.31
LINC00899-201ENST00000421538 PKP1Q13835 747 aa16.99■□□□□ 0.31
LINC00899-201ENST00000421538 CABLES1Q8TDN4 633 aa16.99■□□□□ 0.31
LINC00899-201ENST00000421538 RTF1Q92541 710 aaKnown RBP16.99■□□□□ 0.31
LINC00899-201ENST00000421538 API5Q9BZZ5 524 aaKnown RBP16.99■□□□□ 0.31
LINC00899-201ENST00000421538 SYCE3A1L190 88 aa16.98■□□□□ 0.31
LINC00899-201ENST00000421538 PXDNQ92626 1479 aa16.98■□□□□ 0.31
LINC00899-201ENST00000421538 OTUD7AQ8TE49 926 aaPredicted RBP16.98■□□□□ 0.31
LINC00899-201ENST00000421538 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
LINC00899-201ENST00000421538 KIAA2012Q0VF49 1180 aa16.97■□□□□ 0.31
LINC00899-201ENST00000421538 ANKRD24Q8TF21 1146 aa16.97■□□□□ 0.31
LINC00899-201ENST00000421538 DCTPP1Q9H773 170 aa16.97■□□□□ 0.31
LINC00899-201ENST00000421538 RGPD5Q99666 1765 aa16.97■□□□□ 0.31
LINC00899-201ENST00000421538 UTP14CQ5TAP6 766 aaKnown RBP16.96■□□□□ 0.31
LINC00899-201ENST00000421538 TMEM63CQ9P1W3 806 aa16.96■□□□□ 0.31
LINC00899-201ENST00000421538 GNAT3A8MTJ3 354 aa16.96■□□□□ 0.31
LINC00899-201ENST00000421538 DNTTIP2Q5QJE6 756 aaKnown RBP16.96■□□□□ 0.31
LINC00899-201ENST00000421538 IL17REQ8NFR9 667 aa16.96■□□□□ 0.31
LINC00899-201ENST00000421538 TNS3Q68CZ2 1445 aa16.95■□□□□ 0.3
LINC00899-201ENST00000421538 ST18O60284 1047 aa16.95■□□□□ 0.3
LINC00899-201ENST00000421538 DMTNQ08495 405 aa16.95■□□□□ 0.3
LINC00899-201ENST00000421538 TTC22Q5TAA0 569 aa16.95■□□□□ 0.3
LINC00899-201ENST00000421538 SPATA31A3Q5VYP0 1347 aa16.95■□□□□ 0.3
LINC00899-201ENST00000421538 RNF214Q8ND24 703 aa16.95■□□□□ 0.3
LINC00899-201ENST00000421538 SLAIN2Q9P270 581 aa16.95■□□□□ 0.3
LINC00899-201ENST00000421538 ATP10DQ9P241 1426 aa16.95■□□□□ 0.3
LINC00899-201ENST00000421538 A0A0U1RQG5 324 aaPredicted RBP16.94■□□□□ 0.3
LINC00899-201ENST00000421538 MYRIPQ8NFW9 859 aa16.94■□□□□ 0.3
LINC00899-201ENST00000421538 MAP3K5Q99683 1374 aa16.94■□□□□ 0.3
LINC00899-201ENST00000421538 RGS12O14924 1447 aa16.94■□□□□ 0.3
LINC00899-201ENST00000421538 APBB1O00213 710 aa16.94■□□□□ 0.3
LINC00899-201ENST00000421538 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
LINC00899-201ENST00000421538 MBD3O95983 291 aa16.94■□□□□ 0.3
LINC00899-201ENST00000421538 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
LINC00899-201ENST00000421538 INTS3Q68E01 1043 aaKnown RBP16.93■□□□□ 0.3
LINC00899-201ENST00000421538 ZGPATQ8N5A5 531 aaKnown RBP16.93■□□□□ 0.3
LINC00899-201ENST00000421538 TSPYL4Q9UJ04 414 aa16.93■□□□□ 0.3
LINC00899-201ENST00000421538 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
LINC00899-201ENST00000421538 LRRC37A3O60309 1634 aa16.93■□□□□ 0.3
LINC00899-201ENST00000421538 ANKRD44Q8N8A2 993 aa16.92■□□□□ 0.3
LINC00899-201ENST00000421538 ERBB3P21860 1342 aa16.92■□□□□ 0.3
LINC00899-201ENST00000421538 NCAPD2Q15021 1401 aa16.92■□□□□ 0.3
LINC00899-201ENST00000421538 KIAA0232Q92628 1395 aa16.92■□□□□ 0.3
LINC00899-201ENST00000421538 CEP85Q6P2H3 762 aa16.91■□□□□ 0.3
LINC00899-201ENST00000421538 ZDHHC9Q9Y397 364 aa16.91■□□□□ 0.3
LINC00899-201ENST00000421538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINC00899-201ENST00000421538 CHRNA2Q15822 529 aa16.91■□□□□ 0.3
LINC00899-201ENST00000421538 PRIMPOLQ96LW4 560 aa16.91■□□□□ 0.3
LINC00899-201ENST00000421538 TSPY26PQ9H489 355 aa16.91■□□□□ 0.3
LINC00899-201ENST00000421538 ZSCAN20P17040 1043 aaPredicted RBP16.9■□□□□ 0.3
LINC00899-201ENST00000421538 SDSP20132 328 aa16.9■□□□□ 0.3
LINC00899-201ENST00000421538 HMGN5P82970 282 aaKnown RBP16.9■□□□□ 0.3
LINC00899-201ENST00000421538 CRYBG1Q9Y4K1 1723 aa16.9■□□□□ 0.3
LINC00899-201ENST00000421538 CASC1Q6TDU7 716 aa16.9■□□□□ 0.3
LINC00899-201ENST00000421538 MEIS3Q99687 375 aa16.9■□□□□ 0.3
LINC00899-201ENST00000421538 NSFL1CQ9UNZ2 370 aaKnown RBP16.9■□□□□ 0.3
LINC00899-201ENST00000421538 LGR6Q9HBX8 967 aa16.89■□□□□ 0.3
LINC00899-201ENST00000421538 COL18A1P39060 1754 aa16.89■□□□□ 0.3
LINC00899-201ENST00000421538 CAMTA1Q9Y6Y1 1673 aa16.89■□□□□ 0.29
LINC00899-201ENST00000421538 SYAP1Q96A49 352 aaPredicted RBP16.88■□□□□ 0.29
LINC00899-201ENST00000421538 SOS2Q07890 1332 aaPredicted RBP16.88■□□□□ 0.29
LINC00899-201ENST00000421538 FOXD4L5Q5VV16 416 aaPredicted RBP16.88■□□□□ 0.29
LINC00899-201ENST00000421538 FOXD4L4Q8WXT5 416 aaPredicted RBP16.88■□□□□ 0.29
LINC00899-201ENST00000421538 CHAMP1Q96JM3 812 aa16.88■□□□□ 0.29
LINC00899-201ENST00000421538 ZNF530Q6P9A1 599 aaPredicted RBP16.87■□□□□ 0.29
LINC00899-201ENST00000421538 CEMIPQ8WUJ3 1361 aa16.87■□□□□ 0.29
LINC00899-201ENST00000421538 TAF7Q15545 349 aaPredicted RBP16.87■□□□□ 0.29
LINC00899-201ENST00000421538 RPAP2Q8IXW5 612 aaPredicted RBP16.87■□□□□ 0.29
LINC00899-201ENST00000421538 PLEKHO1Q53GL0 409 aaPredicted RBP16.86■□□□□ 0.29
LINC00899-201ENST00000421538 GTPBP4Q9BZE4 634 aaKnown RBP16.86■□□□□ 0.29
LINC00899-201ENST00000421538 LMO7Q8WWI1 1683 aa16.86■□□□□ 0.29
LINC00899-201ENST00000421538 CBX1P83916 185 aa16.85■□□□□ 0.29
LINC00899-201ENST00000421538 MPRIPQ6WCQ1 1025 aa16.85■□□□□ 0.29
LINC00899-201ENST00000421538 PIBF1Q8WXW3 757 aa16.85■□□□□ 0.29
LINC00899-201ENST00000421538 NLRP2Q9NX02 1062 aa16.85■□□□□ 0.29
LINC00899-201ENST00000421538 PHF14O94880 888 aa16.85■□□□□ 0.29
LINC00899-201ENST00000421538 ZNF710Q8N1W2 664 aa16.85■□□□□ 0.29
LINC00899-201ENST00000421538 TSC1Q92574 1164 aa16.85■□□□□ 0.29
LINC00899-201ENST00000421538 REC8O95072 547 aa16.84■□□□□ 0.29
LINC00899-201ENST00000421538 GTF2F1P35269 517 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC00899-201ENST00000421538 NOLC1Q14978 699 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC00899-201ENST00000421538 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
LINC00899-201ENST00000421538 JARID2Q92833 1246 aaPredicted RBP16.84■□□□□ 0.29
LINC00899-201ENST00000421538 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
LINC00899-201ENST00000421538 TPRNQ4KMQ1 711 aa16.84■□□□□ 0.29
LINC00899-201ENST00000421538 AMOTQ4VCS5 1084 aa16.84■□□□□ 0.29
LINC00899-201ENST00000421538 G2E3Q7L622 706 aa16.84■□□□□ 0.29
LINC00899-201ENST00000421538 HAP1P54257 671 aaPredicted RBP16.84■□□□□ 0.29
LINC00899-201ENST00000421538 KIF3AQ9Y496 699 aa16.84■□□□□ 0.29
LINC00899-201ENST00000421538 CPDO75976 1380 aa16.83■□□□□ 0.29
LINC00899-201ENST00000421538 F6X3S4 739 aa16.83■□□□□ 0.28
LINC00899-201ENST00000421538 PPP4R3BQ5MIZ7 849 aa16.83■□□□□ 0.28
LINC00899-201ENST00000421538 FAM208AQ9UK61 1670 aaKnown RBP16.82■□□□□ 0.28
LINC00899-201ENST00000421538 KIF20AO95235 890 aa16.82■□□□□ 0.28
LINC00899-201ENST00000421538 CSB-PGBD3P0DP91 1061 aa16.82■□□□□ 0.28
LINC00899-201ENST00000421538 SLC4A10Q6U841 1118 aa16.82■□□□□ 0.28
LINC00899-201ENST00000421538 FAM184AQ8NB25 1140 aa16.82■□□□□ 0.28
LINC00899-201ENST00000421538 PTPRCP08575 1304 aa16.82■□□□□ 0.28
LINC00899-201ENST00000421538 KCNQ3O43525 872 aa16.82■□□□□ 0.28
LINC00899-201ENST00000421538 TSHZ3Q63HK5 1081 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms