RNA–Protein interactions for RNA: ENST00000420666.1

ITSN1-215, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-215ENST00000420666 COL15A1P39059 1388 aa19.83■□□□□ 0.77
ITSN1-215ENST00000420666 STARD3NLO95772 234 aa19.83■□□□□ 0.77
ITSN1-215ENST00000420666 TTC5Q8N0Z6 440 aa19.83■□□□□ 0.77
ITSN1-215ENST00000420666 GAS2L2Q8NHY3 880 aa19.83■□□□□ 0.77
ITSN1-215ENST00000420666 BCL2L12Q9HB09 334 aa19.83■□□□□ 0.77
ITSN1-215ENST00000420666 NMRK2Q9NPI5 230 aa19.83■□□□□ 0.77
ITSN1-215ENST00000420666 KCPQ6ZWJ8 1503 aa19.82■□□□□ 0.76
ITSN1-215ENST00000420666 U2SURPO15042 1029 aaKnown RBP19.82■□□□□ 0.76
ITSN1-215ENST00000420666 SERPINB2P05120 415 aa19.82■□□□□ 0.76
ITSN1-215ENST00000420666 IL17REQ8NFR9 667 aa19.82■□□□□ 0.76
ITSN1-215ENST00000420666 GNAT3A8MTJ3 354 aa19.81■□□□□ 0.76
ITSN1-215ENST00000420666 CANXP27824 592 aaKnown RBP19.81■□□□□ 0.76
ITSN1-215ENST00000420666 APLP1P51693 650 aa19.81■□□□□ 0.76
ITSN1-215ENST00000420666 A0A087WZG4 1122 aa19.8■□□□□ 0.76
ITSN1-215ENST00000420666 EIF5P55010 431 aaKnown RBP19.8■□□□□ 0.76
ITSN1-215ENST00000420666 TEFQ10587 303 aa19.8■□□□□ 0.76
ITSN1-215ENST00000420666 TEX13AQ9BXU3 409 aaPredicted RBP19.8■□□□□ 0.76
ITSN1-215ENST00000420666 RNF181Q9P0P0 153 aa19.8■□□□□ 0.76
ITSN1-215ENST00000420666 ADAMTS7Q9UKP4 1686 aa19.8■□□□□ 0.76
ITSN1-215ENST00000420666 CNGB1Q14028 1251 aaPredicted RBP19.79■□□□□ 0.76
ITSN1-215ENST00000420666 ZNF790Q6PG37 636 aa19.79■□□□□ 0.76
ITSN1-215ENST00000420666 ZNF496Q96IT1 587 aaPredicted RBP19.79■□□□□ 0.76
ITSN1-215ENST00000420666 COL3A1P02461 1466 aaPredicted RBP19.79■□□□□ 0.76
ITSN1-215ENST00000420666 IFFO2Q5TF58 517 aa19.78■□□□□ 0.76
ITSN1-215ENST00000420666 RBM46Q8TBY0 533 aaKnown RBP19.78■□□□□ 0.76
ITSN1-215ENST00000420666 KDM2BQ8NHM5 1336 aa19.77■□□□□ 0.76
ITSN1-215ENST00000420666 BRCA1P38398 1863 aaKnown RBP19.77■□□□□ 0.76
ITSN1-215ENST00000420666 HEG1Q9ULI3 1381 aa19.76■□□□□ 0.75
ITSN1-215ENST00000420666 C16orf71Q8IYS4 520 aaPredicted RBP19.76■□□□□ 0.75
ITSN1-215ENST00000420666 TTLL6Q8N841 843 aa19.76■□□□□ 0.75
ITSN1-215ENST00000420666 C2CD5Q86YS7 1000 aa19.75■□□□□ 0.75
ITSN1-215ENST00000420666 CFAP53Q96M91 514 aa19.75■□□□□ 0.75
ITSN1-215ENST00000420666 H0YIN7 160 aa19.74■□□□□ 0.75
ITSN1-215ENST00000420666 IL6STP40189 918 aaPredicted RBP19.74■□□□□ 0.75
ITSN1-215ENST00000420666 BICDL1Q6ZP65 573 aa19.74■□□□□ 0.75
ITSN1-215ENST00000420666 PHACTR3Q96KR7 559 aa19.74■□□□□ 0.75
ITSN1-215ENST00000420666 FMNL2Q96PY5 1086 aa19.74■□□□□ 0.75
ITSN1-215ENST00000420666 ARFGEF1Q9Y6D6 1849 aa19.74■□□□□ 0.75
ITSN1-215ENST00000420666 ZC3H4Q9UPT8 1303 aaKnown RBP19.74■□□□□ 0.75
ITSN1-215ENST00000420666 CEMIPQ8WUJ3 1361 aa19.73■□□□□ 0.75
ITSN1-215ENST00000420666 FSTL1Q12841 308 aa19.73■□□□□ 0.75
ITSN1-215ENST00000420666 TBC1D9BQ66K14 1250 aa19.73■□□□□ 0.75
ITSN1-215ENST00000420666 DNAJC5GQ8N7S2 189 aa19.73■□□□□ 0.75
ITSN1-215ENST00000420666 RRAGCQ9HB90 399 aa19.73■□□□□ 0.75
ITSN1-215ENST00000420666 PDZRN3Q9UPQ7 1066 aa19.73■□□□□ 0.75
ITSN1-215ENST00000420666 LMNB1P20700 586 aa19.72■□□□□ 0.75
ITSN1-215ENST00000420666 PRKAR2BP31323 418 aa19.72■□□□□ 0.75
ITSN1-215ENST00000420666 RASSF7Q02833 373 aa19.72■□□□□ 0.75
ITSN1-215ENST00000420666 RSPH6AQ9H0K4 717 aa19.72■□□□□ 0.75
ITSN1-215ENST00000420666 TBC1D2BQ9UPU7 963 aa19.72■□□□□ 0.75
ITSN1-215ENST00000420666 NUDCQ9Y266 331 aa19.72■□□□□ 0.75
ITSN1-215ENST00000420666 BTBD11A6QL63 1104 aa19.71■□□□□ 0.75
ITSN1-215ENST00000420666 BRIP1Q9BX63 1249 aa19.71■□□□□ 0.75
ITSN1-215ENST00000420666 KCNQ3O43525 872 aa19.7■□□□□ 0.74
ITSN1-215ENST00000420666 A1BGP04217 495 aa19.7■□□□□ 0.74
ITSN1-215ENST00000420666 NPM2Q86SE8 214 aaKnown RBP19.7■□□□□ 0.74
ITSN1-215ENST00000420666 ZNF330Q9Y3S2 320 aaPredicted RBP19.7■□□□□ 0.74
ITSN1-215ENST00000420666 CARMIL3Q8ND23 1372 aa19.7■□□□□ 0.74
ITSN1-215ENST00000420666 NRXN2Q9P2S2 1712 aa19.69■□□□□ 0.74
ITSN1-215ENST00000420666 PDE6BP35913 854 aa19.69■□□□□ 0.74
ITSN1-215ENST00000420666 PRELPP51888 382 aa19.69■□□□□ 0.74
ITSN1-215ENST00000420666 UBR2Q8IWV8 1755 aa19.68■□□□□ 0.74
ITSN1-215ENST00000420666 GLTPD2A6NH11 291 aa19.68■□□□□ 0.74
ITSN1-215ENST00000420666 CAMTA2O94983 1202 aa19.68■□□□□ 0.74
ITSN1-215ENST00000420666 PRR5LQ6MZQ0 368 aa19.68■□□□□ 0.74
ITSN1-215ENST00000420666 ZNF622Q969S3 477 aaKnown RBP eCLIP19.68■□□□□ 0.74
ITSN1-215ENST00000420666 NFKBIEO00221 500 aa19.67■□□□□ 0.74
ITSN1-215ENST00000420666 U2AF1L5P0DN76 240 aaPredicted RBP19.67■□□□□ 0.74
ITSN1-215ENST00000420666 U2AF1Q01081 240 aaKnown RBP eCLIP19.67■□□□□ 0.74
ITSN1-215ENST00000420666 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
ITSN1-215ENST00000420666 USP16Q9Y5T5 823 aa19.67■□□□□ 0.74
ITSN1-215ENST00000420666 PPP2R1AP30153 589 aa19.66■□□□□ 0.74
ITSN1-215ENST00000420666 RTF1Q92541 710 aaKnown RBP19.66■□□□□ 0.74
ITSN1-215ENST00000420666 AFDNP55196 1824 aaKnown RBP19.65■□□□□ 0.74
ITSN1-215ENST00000420666 VEGFAP15692 232 aaPredicted RBP19.65■□□□□ 0.74
ITSN1-215ENST00000420666 DZIP3Q86Y13 1208 aaKnown RBP19.65■□□□□ 0.74
ITSN1-215ENST00000420666 CCDC24Q8N4L8 307 aa19.65■□□□□ 0.74
ITSN1-215ENST00000420666 SMC1BQ8NDV3 1235 aa19.65■□□□□ 0.74
ITSN1-215ENST00000420666 SNRPA1P09661 255 aaKnown RBP19.64■□□□□ 0.73
ITSN1-215ENST00000420666 CNBD1Q8NA66 436 aa19.64■□□□□ 0.73
ITSN1-215ENST00000420666 HTATSF1O43719 755 aaKnown RBP19.63■□□□□ 0.73
ITSN1-215ENST00000420666 C21orf2O43822 256 aa19.63■□□□□ 0.73
ITSN1-215ENST00000420666 CLEC4GQ6UXB4 293 aa19.63■□□□□ 0.73
ITSN1-215ENST00000420666 MCM10Q7L590 875 aa19.63■□□□□ 0.73
ITSN1-215ENST00000420666 CNKSR1Q969H4 720 aa19.63■□□□□ 0.73
ITSN1-215ENST00000420666 VIRMAQ69YN4 1812 aaKnown RBP19.62■□□□□ 0.73
ITSN1-215ENST00000420666 NPHP1O15259 732 aa19.62■□□□□ 0.73
ITSN1-215ENST00000420666 ST5P78524 1137 aa19.62■□□□□ 0.73
ITSN1-215ENST00000420666 HTRA3P83110 453 aa19.62■□□□□ 0.73
ITSN1-215ENST00000420666 STYK1Q6J9G0 422 aa19.62■□□□□ 0.73
ITSN1-215ENST00000420666 KLRG1Q96E93 195 aa19.62■□□□□ 0.73
ITSN1-215ENST00000420666 PRAMEF22A3QJZ6 481 aa19.61■□□□□ 0.73
ITSN1-215ENST00000420666 SRGNP10124 158 aa19.61■□□□□ 0.73
ITSN1-215ENST00000420666 DPY19L2Q6NUT2 758 aa19.61■□□□□ 0.73
ITSN1-215ENST00000420666 ZNF219Q9P2Y4 722 aaPredicted RBP19.61■□□□□ 0.73
ITSN1-215ENST00000420666 SBF1O95248 1867 aa19.6■□□□□ 0.73
ITSN1-215ENST00000420666 PIP4K2AP48426 406 aaPredicted RBP19.6■□□□□ 0.73
ITSN1-215ENST00000420666 MASTLQ96GX5 879 aa19.6■□□□□ 0.73
ITSN1-215ENST00000420666 LTBP3Q9NS15 1303 aa19.59■□□□□ 0.73
ITSN1-215ENST00000420666 RGL2O15211 777 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms