RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 CICQ96RK0 1608 aaPredicted RBP16.86■□□□□ 0.29
TMEM50B-201ENST00000420455 AEBP2Q6ZN18 517 aaPredicted RBP16.85■□□□□ 0.29
TMEM50B-201ENST00000420455 RPAP2Q8IXW5 612 aaPredicted RBP16.85■□□□□ 0.29
TMEM50B-201ENST00000420455 ANKRD44Q8N8A2 993 aa16.85■□□□□ 0.29
TMEM50B-201ENST00000420455 PDZRN3Q9UPQ7 1066 aa16.85■□□□□ 0.29
TMEM50B-201ENST00000420455 ADAMTS2O95450 1211 aa16.85■□□□□ 0.29
TMEM50B-201ENST00000420455 DOT1LQ8TEK3 1739 aa16.85■□□□□ 0.29
TMEM50B-201ENST00000420455 MEIS3Q99687 375 aa16.85■□□□□ 0.29
TMEM50B-201ENST00000420455 ERBB4Q15303 1308 aa16.85■□□□□ 0.29
TMEM50B-201ENST00000420455 PROSER3Q2NL68 480 aa16.84■□□□□ 0.29
TMEM50B-201ENST00000420455 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
TMEM50B-201ENST00000420455 FNBP4Q8N3X1 1017 aaPredicted RBP16.84■□□□□ 0.29
TMEM50B-201ENST00000420455 GCC1Q96CN9 775 aa16.84■□□□□ 0.29
TMEM50B-201ENST00000420455 BCL9O00512 1426 aa16.84■□□□□ 0.29
TMEM50B-201ENST00000420455 BEND3Q5T5X7 828 aa16.84■□□□□ 0.29
TMEM50B-201ENST00000420455 DDX54Q8TDD1 881 aaKnown RBP16.84■□□□□ 0.29
TMEM50B-201ENST00000420455 NUCB1Q02818 461 aa16.83■□□□□ 0.29
TMEM50B-201ENST00000420455 CEP85Q6P2H3 762 aa16.83■□□□□ 0.29
TMEM50B-201ENST00000420455 C1orf115Q9H7X2 142 aa16.83■□□□□ 0.28
TMEM50B-201ENST00000420455 NUP188Q5SRE5 1749 aa16.83■□□□□ 0.28
TMEM50B-201ENST00000420455 THSD7AQ9UPZ6 1657 aa16.82■□□□□ 0.28
TMEM50B-201ENST00000420455 UNC5CLQ8IV45 518 aa16.82■□□□□ 0.28
TMEM50B-201ENST00000420455 USP35Q9P2H5 1018 aa16.82■□□□□ 0.28
TMEM50B-201ENST00000420455 ARFGEF2Q9Y6D5 1785 aa16.82■□□□□ 0.28
TMEM50B-201ENST00000420455 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
TMEM50B-201ENST00000420455 DNAAF4Q8WXU2 420 aa16.82■□□□□ 0.28
TMEM50B-201ENST00000420455 EXOC5O00471 708 aa16.81■□□□□ 0.28
TMEM50B-201ENST00000420455 FAM161AQ3B820 660 aa16.81■□□□□ 0.28
TMEM50B-201ENST00000420455 GNAI3P08754 354 aa16.81■□□□□ 0.28
TMEM50B-201ENST00000420455 VPS72Q15906 364 aa16.81■□□□□ 0.28
TMEM50B-201ENST00000420455 USP44Q9H0E7 712 aa16.81■□□□□ 0.28
TMEM50B-201ENST00000420455 DCTPP1Q9H773 170 aa16.81■□□□□ 0.28
TMEM50B-201ENST00000420455 USP16Q9Y5T5 823 aa16.81■□□□□ 0.28
TMEM50B-201ENST00000420455 PI4KAP2A4QPH2 592 aa16.81■□□□□ 0.28
TMEM50B-201ENST00000420455 SLC4A10Q6U841 1118 aa16.81■□□□□ 0.28
TMEM50B-201ENST00000420455 VSIG10Q8N0Z9 540 aa16.81■□□□□ 0.28
TMEM50B-201ENST00000420455 PI4KAP1Q8N8J0 262 aa16.81■□□□□ 0.28
TMEM50B-201ENST00000420455 NUTM2BA6NNL0 878 aaPredicted RBP16.8■□□□□ 0.28
TMEM50B-201ENST00000420455 NUTM2EB1AL46 878 aaPredicted RBP16.8■□□□□ 0.28
TMEM50B-201ENST00000420455 NUTM2AQ8IVF1 878 aaPredicted RBP16.8■□□□□ 0.28
TMEM50B-201ENST00000420455 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
TMEM50B-201ENST00000420455 PIGBQ92521 554 aa16.8■□□□□ 0.28
TMEM50B-201ENST00000420455 TJP1Q07157 1748 aa16.79■□□□□ 0.28
TMEM50B-201ENST00000420455 UTYO14607 1347 aa16.79■□□□□ 0.28
TMEM50B-201ENST00000420455 ALDH1L1O75891 902 aa16.79■□□□□ 0.28
TMEM50B-201ENST00000420455 ANXA1P04083 346 aa16.79■□□□□ 0.28
TMEM50B-201ENST00000420455 SRCIN1Q9C0H9 1055 aa16.79■□□□□ 0.28
TMEM50B-201ENST00000420455 TMOD3Q9NYL9 352 aa16.79■□□□□ 0.28
TMEM50B-201ENST00000420455 GNAI2P04899 355 aa16.78■□□□□ 0.28
TMEM50B-201ENST00000420455 IPO9Q96P70 1041 aaKnown RBP16.78■□□□□ 0.28
TMEM50B-201ENST00000420455 RREB1Q92766 1687 aa16.78■□□□□ 0.28
TMEM50B-201ENST00000420455 ATG3Q9NT62 314 aa16.77■□□□□ 0.28
TMEM50B-201ENST00000420455 ANP32AP39687 249 aaKnown RBP16.77■□□□□ 0.27
TMEM50B-201ENST00000420455 MAP3K2Q9Y2U5 619 aa16.77■□□□□ 0.27
TMEM50B-201ENST00000420455 CHD1LQ86WJ1 897 aa16.76■□□□□ 0.27
TMEM50B-201ENST00000420455 DDX58O95786 925 aaKnown RBP16.76■□□□□ 0.27
TMEM50B-201ENST00000420455 NPM2Q86SE8 214 aaKnown RBP16.76■□□□□ 0.27
TMEM50B-201ENST00000420455 NBPF26B4DH59 902 aa16.75■□□□□ 0.27
TMEM50B-201ENST00000420455 ATP8B2P98198 1209 aa16.75■□□□□ 0.27
TMEM50B-201ENST00000420455 DDB1Q16531 1140 aa16.75■□□□□ 0.27
TMEM50B-201ENST00000420455 NBPF14Q5TI25 921 aa16.75■□□□□ 0.27
TMEM50B-201ENST00000420455 NBPF10Q6P3W6 841 aaKnown RBP16.75■□□□□ 0.27
TMEM50B-201ENST00000420455 NBPF15Q8N660 670 aa16.75■□□□□ 0.27
TMEM50B-201ENST00000420455 LINS1Q8NG48 757 aa16.75■□□□□ 0.27
TMEM50B-201ENST00000420455 MARCH10Q8NA82 808 aaPredicted RBP16.74■□□□□ 0.27
TMEM50B-201ENST00000420455 TEX13AQ9BXU3 409 aaPredicted RBP16.74■□□□□ 0.27
TMEM50B-201ENST00000420455 COL15A1P39059 1388 aa16.74■□□□□ 0.27
TMEM50B-201ENST00000420455 XAGE3Q8WTP9 111 aa16.73■□□□□ 0.27
TMEM50B-201ENST00000420455 ASAP1Q9ULH1 1129 aa16.73■□□□□ 0.27
TMEM50B-201ENST00000420455 METTL22Q9BUU2 404 aaPredicted RBP16.73■□□□□ 0.27
TMEM50B-201ENST00000420455 AFDNP55196 1824 aaKnown RBP16.73■□□□□ 0.27
TMEM50B-201ENST00000420455 HSPA1LP34931 641 aa16.73■□□□□ 0.27
TMEM50B-201ENST00000420455 MTX1Q13505 466 aa16.73■□□□□ 0.27
TMEM50B-201ENST00000420455 POLA2Q14181 598 aa16.73■□□□□ 0.27
TMEM50B-201ENST00000420455 COPS6Q7L5N1 327 aa16.73■□□□□ 0.27
TMEM50B-201ENST00000420455 HMMRO75330 724 aa16.72■□□□□ 0.27
TMEM50B-201ENST00000420455 UBTFL1P0CB47 393 aaPredicted RBP16.72■□□□□ 0.27
TMEM50B-201ENST00000420455 ANP32EQ9BTT0 268 aa16.72■□□□□ 0.27
TMEM50B-201ENST00000420455 SEC24BO95487 1268 aa16.72■□□□□ 0.27
TMEM50B-201ENST00000420455 IGKV5-2P06315 115 aa16.72■□□□□ 0.27
TMEM50B-201ENST00000420455 NGLY1Q96IV0 654 aa16.72■□□□□ 0.27
TMEM50B-201ENST00000420455 C8orf37Q96NL8 207 aa16.72■□□□□ 0.27
TMEM50B-201ENST00000420455 SSH3Q8TE77 659 aa16.71■□□□□ 0.27
TMEM50B-201ENST00000420455 LRRFIP2Q9Y608 721 aaKnown RBP16.71■□□□□ 0.27
TMEM50B-201ENST00000420455 ATRNO75882 1429 aa16.71■□□□□ 0.27
TMEM50B-201ENST00000420455 NBPF7P0C2Y1 421 aaPredicted RBP16.71■□□□□ 0.27
TMEM50B-201ENST00000420455 MYL6BP14649 208 aa16.71■□□□□ 0.27
TMEM50B-201ENST00000420455 ANKRD13DQ6ZTN6 518 aa16.71■□□□□ 0.27
TMEM50B-201ENST00000420455 PLBD2Q8NHP8 589 aa16.71■□□□□ 0.27
TMEM50B-201ENST00000420455 NOP58Q9Y2X3 529 aaKnown RBP16.71■□□□□ 0.27
TMEM50B-201ENST00000420455 SLC4A9Q96Q91 983 aa16.7■□□□□ 0.26
TMEM50B-201ENST00000420455 COL5A3P25940 1745 aaPredicted RBP16.7■□□□□ 0.26
TMEM50B-201ENST00000420455 PNMA6EA0A0J9YXQ4 647 aa16.69■□□□□ 0.26
TMEM50B-201ENST00000420455 NEURL1BA8MQ27 555 aa16.69■□□□□ 0.26
TMEM50B-201ENST00000420455 ANKRD45Q5TZF3 282 aa16.69■□□□□ 0.26
TMEM50B-201ENST00000420455 NHSQ6T4R5 1651 aa16.69■□□□□ 0.26
TMEM50B-201ENST00000420455 TUBGCP6Q96RT7 1819 aa16.69■□□□□ 0.26
TMEM50B-201ENST00000420455 ONECUT3O60422 494 aaPredicted RBP16.68■□□□□ 0.26
TMEM50B-201ENST00000420455 PTCD1O75127 700 aaKnown RBP16.68■□□□□ 0.26
TMEM50B-201ENST00000420455 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms