RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 TTC5Q8N0Z6 440 aa26.41■■□□□ 1.82
GPC1-202ENST00000420138 ATP10DQ9P241 1426 aa26.4■■□□□ 1.82
GPC1-202ENST00000420138 TOGARAM1Q9Y4F4 1720 aa26.4■■□□□ 1.82
GPC1-202ENST00000420138 RGS3P49796 1198 aa26.39■■□□□ 1.82
GPC1-202ENST00000420138 FMNL2Q96PY5 1086 aa26.39■■□□□ 1.82
GPC1-202ENST00000420138 TNS2Q63HR2 1409 aa26.39■■□□□ 1.82
GPC1-202ENST00000420138 EXOC5O00471 708 aa26.39■■□□□ 1.81
GPC1-202ENST00000420138 SNRPA1P09661 255 aaKnown RBP26.39■■□□□ 1.81
GPC1-202ENST00000420138 BARGINQ6ZT62 677 aa26.38■■□□□ 1.81
GPC1-202ENST00000420138 DDX21Q9NR30 783 aaKnown RBP eCLIP26.38■■□□□ 1.81
GPC1-202ENST00000420138 USP16Q9Y5T5 823 aa26.37■■□□□ 1.81
GPC1-202ENST00000420138 ADCY9O60503 1353 aa26.37■■□□□ 1.81
GPC1-202ENST00000420138 AFF2P51816 1311 aa26.37■■□□□ 1.81
GPC1-202ENST00000420138 PAPPAQ13219 1627 aa26.37■■□□□ 1.81
GPC1-202ENST00000420138 KCPQ6ZWJ8 1503 aa26.36■■□□□ 1.81
GPC1-202ENST00000420138 PI4KAP2A4QPH2 592 aa26.36■■□□□ 1.81
GPC1-202ENST00000420138 PI4KAP1Q8N8J0 262 aa26.36■■□□□ 1.81
GPC1-202ENST00000420138 HYPKQ9NX55 129 aa26.36■■□□□ 1.81
GPC1-202ENST00000420138 N4BP2Q86UW6 1770 aaPredicted RBP26.35■■□□□ 1.81
GPC1-202ENST00000420138 DDB1Q16531 1140 aa26.35■■□□□ 1.81
GPC1-202ENST00000420138 LRP10Q7Z4F1 713 aa26.35■■□□□ 1.81
GPC1-202ENST00000420138 CEP85Q6P2H3 762 aa26.34■■□□□ 1.81
GPC1-202ENST00000420138 ANKRD44Q8N8A2 993 aa26.34■■□□□ 1.81
GPC1-202ENST00000420138 DNAAF4Q8WXU2 420 aa26.34■■□□□ 1.81
GPC1-202ENST00000420138 ITGB4P16144 1822 aa26.34■■□□□ 1.81
GPC1-202ENST00000420138 UBR2Q8IWV8 1755 aa26.34■■□□□ 1.81
GPC1-202ENST00000420138 PDE4AP27815 886 aa26.33■■□□□ 1.81
GPC1-202ENST00000420138 BEND3Q5T5X7 828 aa26.32■■□□□ 1.8
GPC1-202ENST00000420138 FAM98CQ17RN3 349 aaKnown RBP26.32■■□□□ 1.8
GPC1-202ENST00000420138 RPAP2Q8IXW5 612 aaPredicted RBP26.32■■□□□ 1.8
GPC1-202ENST00000420138 BACH2Q9BYV9 841 aa26.32■■□□□ 1.8
GPC1-202ENST00000420138 KAT6BQ8WYB5 2073 aa26.31■■□□□ 1.8
GPC1-202ENST00000420138 PIGBQ92521 554 aa26.31■■□□□ 1.8
GPC1-202ENST00000420138 USP44Q9H0E7 712 aa26.31■■□□□ 1.8
GPC1-202ENST00000420138 NUCB1Q02818 461 aa26.3■■□□□ 1.8
GPC1-202ENST00000420138 KSR2Q6VAB6 950 aa26.3■■□□□ 1.8
GPC1-202ENST00000420138 GCC1Q96CN9 775 aa26.3■■□□□ 1.8
GPC1-202ENST00000420138 TMOD3Q9NYL9 352 aa26.3■■□□□ 1.8
GPC1-202ENST00000420138 SRCIN1Q9C0H9 1055 aa26.3■■□□□ 1.8
GPC1-202ENST00000420138 DOT1LQ8TEK3 1739 aa26.29■■□□□ 1.8
GPC1-202ENST00000420138 GNAI3P08754 354 aa26.28■■□□□ 1.8
GPC1-202ENST00000420138 MAP3K2Q9Y2U5 619 aa26.28■■□□□ 1.8
GPC1-202ENST00000420138 GNAI2P04899 355 aa26.28■■□□□ 1.8
GPC1-202ENST00000420138 THSD7AQ9UPZ6 1657 aa26.27■■□□□ 1.8
GPC1-202ENST00000420138 MYL6BP14649 208 aa26.27■■□□□ 1.8
GPC1-202ENST00000420138 DCTPP1Q9H773 170 aa26.27■■□□□ 1.8
GPC1-202ENST00000420138 TRPC5Q9UL62 973 aaPredicted RBP26.26■■□□□ 1.79
GPC1-202ENST00000420138 ASAP1Q9ULH1 1129 aa26.26■■□□□ 1.79
GPC1-202ENST00000420138 BCL9O00512 1426 aa26.26■■□□□ 1.79
GPC1-202ENST00000420138 ATRNO75882 1429 aa26.26■■□□□ 1.79
GPC1-202ENST00000420138 LAMB4A4D0S4 1761 aa26.26■■□□□ 1.79
GPC1-202ENST00000420138 PTCD1O75127 700 aaKnown RBP26.25■■□□□ 1.79
GPC1-202ENST00000420138 GJD4Q96KN9 370 aaPredicted RBP26.25■■□□□ 1.79
GPC1-202ENST00000420138 A0A0G2JS52 829 aa26.25■■□□□ 1.79
GPC1-202ENST00000420138 PIP4K2AP48426 406 aaPredicted RBP26.25■■□□□ 1.79
GPC1-202ENST00000420138 MYT1Q01538 1121 aa26.25■■□□□ 1.79
GPC1-202ENST00000420138 XAGE3Q8WTP9 111 aa26.25■■□□□ 1.79
GPC1-202ENST00000420138 ATG3Q9NT62 314 aa26.25■■□□□ 1.79
GPC1-202ENST00000420138 AIMP1Q12904 312 aaKnown RBP26.24■■□□□ 1.79
GPC1-202ENST00000420138 C8orf34Q49A92 452 aa26.24■■□□□ 1.79
GPC1-202ENST00000420138 CHD1LQ86WJ1 897 aa26.24■■□□□ 1.79
GPC1-202ENST00000420138 FBXO41Q8TF61 875 aa26.24■■□□□ 1.79
GPC1-202ENST00000420138 NBPF26B4DH59 902 aa26.23■■□□□ 1.79
GPC1-202ENST00000420138 NBPF14Q5TI25 921 aa26.23■■□□□ 1.79
GPC1-202ENST00000420138 NBPF10Q6P3W6 841 aaKnown RBP26.23■■□□□ 1.79
GPC1-202ENST00000420138 COPS6Q7L5N1 327 aa26.23■■□□□ 1.79
GPC1-202ENST00000420138 NBPF15Q8N660 670 aa26.23■■□□□ 1.79
GPC1-202ENST00000420138 ERBB4Q15303 1308 aa26.23■■□□□ 1.79
GPC1-202ENST00000420138 DDX58O95786 925 aaKnown RBP26.23■■□□□ 1.79
GPC1-202ENST00000420138 MARCH10Q8NA82 808 aaPredicted RBP26.23■■□□□ 1.79
GPC1-202ENST00000420138 FAM161AQ3B820 660 aa26.22■■□□□ 1.79
GPC1-202ENST00000420138 MSH5O43196 834 aa26.21■■□□□ 1.79
GPC1-202ENST00000420138 LNPKQ9C0E8 428 aa26.21■■□□□ 1.79
GPC1-202ENST00000420138 LRRFIP2Q9Y608 721 aaKnown RBP26.21■■□□□ 1.79
GPC1-202ENST00000420138 ALDH1L1O75891 902 aa26.21■■□□□ 1.79
GPC1-202ENST00000420138 NBPF7P0C2Y1 421 aaPredicted RBP26.21■■□□□ 1.79
GPC1-202ENST00000420138 UBTFL1P0CB47 393 aaPredicted RBP26.21■■□□□ 1.79
GPC1-202ENST00000420138 ANKRD45Q5TZF3 282 aa26.21■■□□□ 1.79
GPC1-202ENST00000420138 LINS1Q8NG48 757 aa26.19■■□□□ 1.78
GPC1-202ENST00000420138 QTRT2Q9H974 415 aaKnown RBP26.19■■□□□ 1.78
GPC1-202ENST00000420138 PRIM1P49642 420 aaKnown RBP26.18■■□□□ 1.78
GPC1-202ENST00000420138 ATP8B2P98198 1209 aa26.18■■□□□ 1.78
GPC1-202ENST00000420138 CWF19L2Q2TBE0 894 aaKnown RBP26.18■■□□□ 1.78
GPC1-202ENST00000420138 VSIG10Q8N0Z9 540 aa26.18■■□□□ 1.78
GPC1-202ENST00000420138 PNMA6EA0A0J9YXQ4 647 aa26.18■■□□□ 1.78
GPC1-202ENST00000420138 A1BGP04217 495 aa26.18■■□□□ 1.78
GPC1-202ENST00000420138 IGKV5-2P06315 115 aa26.18■■□□□ 1.78
GPC1-202ENST00000420138 SYTL4Q96C24 671 aaPredicted RBP26.18■■□□□ 1.78
GPC1-202ENST00000420138 RIC3Q7Z5B4 369 aa26.17■■□□□ 1.78
GPC1-202ENST00000420138 IBTKQ9P2D0 1353 aaPredicted RBP26.17■■□□□ 1.78
GPC1-202ENST00000420138 ANKRD13DQ6ZTN6 518 aa26.16■■□□□ 1.78
GPC1-202ENST00000420138 SLC4A9Q96Q91 983 aa26.16■■□□□ 1.78
GPC1-202ENST00000420138 HMMRO75330 724 aa26.16■■□□□ 1.78
GPC1-202ENST00000420138 METTL22Q9BUU2 404 aaPredicted RBP26.16■■□□□ 1.78
GPC1-202ENST00000420138 UTYO14607 1347 aa26.14■■□□□ 1.78
GPC1-202ENST00000420138 DNAJC10Q8IXB1 793 aa26.14■■□□□ 1.78
GPC1-202ENST00000420138 ANP32AP39687 249 aaKnown RBP26.13■■□□□ 1.77
GPC1-202ENST00000420138 ONECUT3O60422 494 aaPredicted RBP26.12■■□□□ 1.77
GPC1-202ENST00000420138 TEX13AQ9BXU3 409 aaPredicted RBP26.12■■□□□ 1.77
GPC1-202ENST00000420138 NEURL1BA8MQ27 555 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms