RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 DIP2CQ9Y2E4 1556 aa9.91□□□□□ -0.82
EPHA4-205ENST00000419964 FRMPD1Q5SYB0 1578 aa9.9□□□□□ -0.82
EPHA4-205ENST00000419964 RC3H1Q5TC82 1133 aaKnown RBP9.9□□□□□ -0.82
EPHA4-205ENST00000419964 TRMT44Q8IYL2 757 aaKnown RBP9.9□□□□□ -0.82
EPHA4-205ENST00000419964 EMID1Q96A84 441 aaPredicted RBP9.9□□□□□ -0.82
EPHA4-205ENST00000419964 ARHGAP31Q2M1Z3 1444 aa9.9□□□□□ -0.83
EPHA4-205ENST00000419964 WASHC2CQ9Y4E1 1318 aa9.89□□□□□ -0.83
EPHA4-205ENST00000419964 NBPF20Q3BBV1 942 aa9.89□□□□□ -0.83
EPHA4-205ENST00000419964 SLFNL1Q499Z3 407 aa9.89□□□□□ -0.83
EPHA4-205ENST00000419964 NFATC2IPQ8NCF5 419 aa9.89□□□□□ -0.83
EPHA4-205ENST00000419964 YTHDC1Q96MU7 727 aaKnown RBP9.89□□□□□ -0.83
EPHA4-205ENST00000419964 PPP1R12CQ9BZL4 782 aa9.89□□□□□ -0.83
EPHA4-205ENST00000419964 KIAA1210Q9ULL0 1709 aa9.89□□□□□ -0.83
EPHA4-205ENST00000419964 MYOM2P54296 1465 aa9.89□□□□□ -0.83
EPHA4-205ENST00000419964 CLTCL1P53675 1640 aa9.89□□□□□ -0.83
EPHA4-205ENST00000419964 KIF1BO60333 1816 aa9.89□□□□□ -0.83
EPHA4-205ENST00000419964 EIF3AQ14152 1382 aaKnown RBP9.88□□□□□ -0.83
EPHA4-205ENST00000419964 KTN1Q86UP2 1357 aaKnown RBP9.88□□□□□ -0.83
EPHA4-205ENST00000419964 KIF7Q2M1P5 1343 aa9.88□□□□□ -0.83
EPHA4-205ENST00000419964 RPGRIP1LQ68CZ1 1315 aa9.88□□□□□ -0.83
EPHA4-205ENST00000419964 PPRC1Q5VV67 1664 aaKnown RBP9.88□□□□□ -0.83
EPHA4-205ENST00000419964 RGL3Q3MIN7 710 aa9.88□□□□□ -0.83
EPHA4-205ENST00000419964 SPRYD7Q5W111 196 aa9.88□□□□□ -0.83
EPHA4-205ENST00000419964 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
EPHA4-205ENST00000419964 ABCC3O15438 1527 aa9.87□□□□□ -0.83
EPHA4-205ENST00000419964 PALM3A6NDB9 673 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-205ENST00000419964 CDCA8Q53HL2 280 aa9.87□□□□□ -0.83
EPHA4-205ENST00000419964 UCN2Q96RP3 112 aa9.87□□□□□ -0.83
EPHA4-205ENST00000419964 AGLP35573 1532 aa9.87□□□□□ -0.83
EPHA4-205ENST00000419964 MADDQ8WXG6 1647 aa9.86□□□□□ -0.83
EPHA4-205ENST00000419964 WNT7AO00755 349 aa9.86□□□□□ -0.83
EPHA4-205ENST00000419964 RAPGEF3O95398 923 aa9.86□□□□□ -0.83
EPHA4-205ENST00000419964 RNF20Q5VTR2 975 aa9.86□□□□□ -0.83
EPHA4-205ENST00000419964 RNF135Q8IUD6 432 aa9.86□□□□□ -0.83
EPHA4-205ENST00000419964 ARXQ96QS3 562 aa9.86□□□□□ -0.83
EPHA4-205ENST00000419964 PRKD2Q9BZL6 878 aa9.86□□□□□ -0.83
EPHA4-205ENST00000419964 TFIP11Q9UBB9 837 aaKnown RBP9.86□□□□□ -0.83
EPHA4-205ENST00000419964 CAMSAP1Q5T5Y3 1602 aa9.85□□□□□ -0.83
EPHA4-205ENST00000419964 ATP9BO43861 1147 aa9.85□□□□□ -0.83
EPHA4-205ENST00000419964 GGT6Q6P531 493 aa9.85□□□□□ -0.83
EPHA4-205ENST00000419964 ZNF598Q86UK7 904 aaKnown RBP9.85□□□□□ -0.83
EPHA4-205ENST00000419964 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
EPHA4-205ENST00000419964 SLC52A1Q9NWF4 448 aa9.85□□□□□ -0.83
EPHA4-205ENST00000419964 MAP4K5Q9Y4K4 846 aa9.85□□□□□ -0.83
EPHA4-205ENST00000419964 NPATQ14207 1427 aa9.84□□□□□ -0.83
EPHA4-205ENST00000419964 ADGRB3O60242 1522 aa9.84□□□□□ -0.83
EPHA4-205ENST00000419964 ST20-MTHFSA0A0A6YYL1 179 aa9.84□□□□□ -0.83
EPHA4-205ENST00000419964 TMF1P82094 1093 aa9.84□□□□□ -0.83
EPHA4-205ENST00000419964 ZNF697Q5TEC3 545 aa9.84□□□□□ -0.83
EPHA4-205ENST00000419964 TBC1D9Q6ZT07 1266 aa9.84□□□□□ -0.83
EPHA4-205ENST00000419964 VASH1Q7L8A9 365 aaPredicted RBP9.84□□□□□ -0.83
EPHA4-205ENST00000419964 SEPT12Q8IYM1 358 aa9.84□□□□□ -0.83
EPHA4-205ENST00000419964 MPNDQ8N594 471 aa9.84□□□□□ -0.83
EPHA4-205ENST00000419964 PIK3CDO00329 1044 aa9.83□□□□□ -0.84
EPHA4-205ENST00000419964 GIGYF1O75420 1035 aaPredicted RBP9.83□□□□□ -0.84
EPHA4-205ENST00000419964 SKIP12755 728 aa9.83□□□□□ -0.84
EPHA4-205ENST00000419964 LMOD1P29536 600 aaPredicted RBP9.83□□□□□ -0.84
EPHA4-205ENST00000419964 ARID5BQ14865 1188 aa9.83□□□□□ -0.84
EPHA4-205ENST00000419964 CFAP70Q5T0N1 1121 aa9.83□□□□□ -0.84
EPHA4-205ENST00000419964 PHTF2Q8N3S3 785 aa9.83□□□□□ -0.84
EPHA4-205ENST00000419964 KCTD15Q96SI1 283 aaPredicted RBP9.83□□□□□ -0.84
EPHA4-205ENST00000419964 MAFBQ9Y5Q3 323 aaPredicted RBP9.83□□□□□ -0.84
EPHA4-205ENST00000419964 SCAF11Q99590 1463 aaKnown RBP9.83□□□□□ -0.84
EPHA4-205ENST00000419964 NOS1P29475 1434 aa9.82□□□□□ -0.84
EPHA4-205ENST00000419964 ESPNB1AK53 854 aa9.82□□□□□ -0.84
EPHA4-205ENST00000419964 MAP7D1Q3KQU3 841 aa9.82□□□□□ -0.84
EPHA4-205ENST00000419964 MRGPRX2Q96LB1 330 aa9.82□□□□□ -0.84
EPHA4-205ENST00000419964 CDK15Q96Q40 435 aa9.82□□□□□ -0.84
EPHA4-205ENST00000419964 PRKRIP1Q9H875 184 aaPredicted RBP9.82□□□□□ -0.84
EPHA4-205ENST00000419964 IFT172Q9UG01 1749 aa9.82□□□□□ -0.84
EPHA4-205ENST00000419964 SETBP1Q9Y6X0 1596 aa9.81□□□□□ -0.84
EPHA4-205ENST00000419964 NRXN1Q9ULB1 1477 aa9.81□□□□□ -0.84
EPHA4-205ENST00000419964 COL17A1Q9UMD9 1497 aaPredicted RBP9.81□□□□□ -0.84
EPHA4-205ENST00000419964 C11orf95C9JLR9 678 aaPredicted RBP9.81□□□□□ -0.84
EPHA4-205ENST00000419964 SIAH2O43255 324 aa9.81□□□□□ -0.84
EPHA4-205ENST00000419964 LZTS3O60299 673 aaPredicted RBP9.81□□□□□ -0.84
EPHA4-205ENST00000419964 RFX1P22670 979 aa9.81□□□□□ -0.84
EPHA4-205ENST00000419964 PIK3C2BO00750 1634 aa9.81□□□□□ -0.84
EPHA4-205ENST00000419964 IQGAP1P46940 1657 aa9.8□□□□□ -0.84
EPHA4-205ENST00000419964 USP17L5A8MUK1 530 aa9.8□□□□□ -0.84
EPHA4-205ENST00000419964 PLEKHM2Q8IWE5 1019 aa9.8□□□□□ -0.84
EPHA4-205ENST00000419964 HOMEZQ8IX15 550 aa9.8□□□□□ -0.84
EPHA4-205ENST00000419964 PLPP7Q8NBV4 271 aa9.8□□□□□ -0.84
EPHA4-205ENST00000419964 ARHGEF40Q8TER5 1519 aa9.8□□□□□ -0.84
EPHA4-205ENST00000419964 YEATS2Q9ULM3 1422 aa9.8□□□□□ -0.84
EPHA4-205ENST00000419964 KIF13AQ9H1H9 1805 aa9.79□□□□□ -0.84
EPHA4-205ENST00000419964 FOXC1Q12948 553 aa9.79□□□□□ -0.84
EPHA4-205ENST00000419964 RALBP1Q15311 655 aa9.79□□□□□ -0.84
EPHA4-205ENST00000419964 PBXIP1Q96AQ6 731 aa9.79□□□□□ -0.84
EPHA4-205ENST00000419964 TSPOAP1O95153 1857 aa9.79□□□□□ -0.84
EPHA4-205ENST00000419964 USP17L3A6NCW0 530 aa9.78□□□□□ -0.84
EPHA4-205ENST00000419964 USP17L4A6NCW7 530 aa9.78□□□□□ -0.84
EPHA4-205ENST00000419964 NBPF1Q3BBV0 1214 aa9.78□□□□□ -0.84
EPHA4-205ENST00000419964 USP17L2Q6R6M4 530 aa9.78□□□□□ -0.84
EPHA4-205ENST00000419964 USP17L1Q7RTZ2 530 aa9.78□□□□□ -0.84
EPHA4-205ENST00000419964 DOLKQ9UPQ8 538 aa9.78□□□□□ -0.84
EPHA4-205ENST00000419964 TLL2Q9Y6L7 1015 aa9.78□□□□□ -0.84
EPHA4-205ENST00000419964 ZFYVE9O95405 1425 aa9.78□□□□□ -0.84
EPHA4-205ENST00000419964 SBNO2Q9Y2G9 1366 aa9.77□□□□□ -0.84
EPHA4-205ENST00000419964 RGS20O76081 388 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms