RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
LINC00642-201ENST00000419459 SMC4Q9NTJ3 1288 aa16.29■□□□□ 0.2
LINC00642-201ENST00000419459 PIP4K2AP48426 406 aaPredicted RBP16.29■□□□□ 0.2
LINC00642-201ENST00000419459 SLC4A9Q96Q91 983 aa16.29■□□□□ 0.2
LINC00642-201ENST00000419459 NFKBIBQ15653 356 aa16.28■□□□□ 0.2
LINC00642-201ENST00000419459 FAM196AQ6ZSG2 479 aa16.28■□□□□ 0.2
LINC00642-201ENST00000419459 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
LINC00642-201ENST00000419459 USP16Q9Y5T5 823 aa16.28■□□□□ 0.2
LINC00642-201ENST00000419459 ANXA1P04083 346 aa16.28■□□□□ 0.2
LINC00642-201ENST00000419459 HDGFL1Q5TGJ6 251 aa16.28■□□□□ 0.2
LINC00642-201ENST00000419459 PALLDQ8WX93 1383 aa16.27■□□□□ 0.2
LINC00642-201ENST00000419459 RTN4Q9NQC3 1192 aaKnown RBP16.27■□□□□ 0.2
LINC00642-201ENST00000419459 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
LINC00642-201ENST00000419459 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
LINC00642-201ENST00000419459 LAMB4A4D0S4 1761 aa16.26■□□□□ 0.19
LINC00642-201ENST00000419459 CENPQQ7L2Z9 268 aaPredicted RBP16.26■□□□□ 0.19
LINC00642-201ENST00000419459 CHPF2Q9P2E5 772 aa16.26■□□□□ 0.19
LINC00642-201ENST00000419459 SNRPA1P09661 255 aaKnown RBP16.25■□□□□ 0.19
LINC00642-201ENST00000419459 TNNQ9UQP3 1299 aa16.25■□□□□ 0.19
LINC00642-201ENST00000419459 KDM2BQ8NHM5 1336 aa16.25■□□□□ 0.19
LINC00642-201ENST00000419459 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
LINC00642-201ENST00000419459 PROSER3Q2NL68 480 aa16.24■□□□□ 0.19
LINC00642-201ENST00000419459 UBE2Q2Q8WVN8 375 aa16.24■□□□□ 0.19
LINC00642-201ENST00000419459 TJP1Q07157 1748 aa16.24■□□□□ 0.19
LINC00642-201ENST00000419459 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
LINC00642-201ENST00000419459 SIK1P57059 783 aa16.24■□□□□ 0.19
LINC00642-201ENST00000419459 DNAJC10Q8IXB1 793 aa16.24■□□□□ 0.19
LINC00642-201ENST00000419459 C20orf194Q5TEA3 1177 aa16.23■□□□□ 0.19
LINC00642-201ENST00000419459 CCDC30Q5VVM6 783 aa16.23■□□□□ 0.19
LINC00642-201ENST00000419459 G2E3Q7L622 706 aa16.23■□□□□ 0.19
LINC00642-201ENST00000419459 BCL11BQ9C0K0 894 aaPredicted RBP16.23■□□□□ 0.19
LINC00642-201ENST00000419459 MYL6BP14649 208 aa16.23■□□□□ 0.19
LINC00642-201ENST00000419459 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
LINC00642-201ENST00000419459 ATP6V1AP38606 617 aa16.23■□□□□ 0.19
LINC00642-201ENST00000419459 ALDH1L2Q3SY69 923 aa16.23■□□□□ 0.19
LINC00642-201ENST00000419459 MRPL50Q8N5N7 158 aaKnown RBP16.23■□□□□ 0.19
LINC00642-201ENST00000419459 CLUAP1Q96AJ1 413 aa16.23■□□□□ 0.19
LINC00642-201ENST00000419459 NOB1Q9ULX3 412 aaKnown RBP16.23■□□□□ 0.19
LINC00642-201ENST00000419459 HOXB7P09629 217 aa16.22■□□□□ 0.19
LINC00642-201ENST00000419459 FAM161AQ3B820 660 aa16.22■□□□□ 0.19
LINC00642-201ENST00000419459 CRBNQ96SW2 442 aa16.22■□□□□ 0.19
LINC00642-201ENST00000419459 STK31Q9BXU1 1019 aa16.22■□□□□ 0.19
LINC00642-201ENST00000419459 PHAXQ9H814 394 aaKnown RBP16.22■□□□□ 0.19
LINC00642-201ENST00000419459 LY75O60449 1722 aa16.21■□□□□ 0.19
LINC00642-201ENST00000419459 A1BGP04217 495 aa16.21■□□□□ 0.19
LINC00642-201ENST00000419459 ITPK1Q13572 414 aa16.21■□□□□ 0.19
LINC00642-201ENST00000419459 ZNF428Q96B54 188 aa16.21■□□□□ 0.19
LINC00642-201ENST00000419459 CACNA1FO60840 1977 aa16.21■□□□□ 0.19
LINC00642-201ENST00000419459 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
LINC00642-201ENST00000419459 SRCAPQ6ZRS2 3230 aa16.21■□□□□ 0.19
LINC00642-201ENST00000419459 MYH14Q7Z406 1995 aaKnown RBP16.21■□□□□ 0.18
LINC00642-201ENST00000419459 TNS1Q9HBL0 1735 aaKnown RBP16.2■□□□□ 0.18
LINC00642-201ENST00000419459 PDIA6Q15084 440 aa16.2■□□□□ 0.18
LINC00642-201ENST00000419459 BRPF3Q9ULD4 1205 aa16.2■□□□□ 0.18
LINC00642-201ENST00000419459 TRIM27P14373 513 aa16.19■□□□□ 0.18
LINC00642-201ENST00000419459 ZNF330Q9Y3S2 320 aaPredicted RBP16.19■□□□□ 0.18
LINC00642-201ENST00000419459 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
LINC00642-201ENST00000419459 SMARCC1Q92922 1105 aaPredicted RBP16.19■□□□□ 0.18
LINC00642-201ENST00000419459 DBF4Q9UBU7 674 aaPredicted RBP16.19■□□□□ 0.18
LINC00642-201ENST00000419459 COL5A3P25940 1745 aaPredicted RBP16.19■□□□□ 0.18
LINC00642-201ENST00000419459 SOS1Q07889 1333 aaPredicted RBP16.18■□□□□ 0.18
LINC00642-201ENST00000419459 KIF16BQ96L93 1317 aa16.18■□□□□ 0.18
LINC00642-201ENST00000419459 NBPF26B4DH59 902 aa16.18■□□□□ 0.18
LINC00642-201ENST00000419459 RLBP1P12271 317 aa16.18■□□□□ 0.18
LINC00642-201ENST00000419459 NBPF14Q5TI25 921 aa16.18■□□□□ 0.18
LINC00642-201ENST00000419459 NBPF10Q6P3W6 841 aaKnown RBP16.18■□□□□ 0.18
LINC00642-201ENST00000419459 FAM43AQ8N2R8 423 aa16.18■□□□□ 0.18
LINC00642-201ENST00000419459 NBPF15Q8N660 670 aa16.18■□□□□ 0.18
LINC00642-201ENST00000419459 PANK1Q8TE04 598 aa16.18■□□□□ 0.18
LINC00642-201ENST00000419459 TAF1LQ8IZX4 1826 aa16.18■□□□□ 0.18
LINC00642-201ENST00000419459 APBA3O96018 575 aa16.18■□□□□ 0.18
LINC00642-201ENST00000419459 CYP19A1P11511 503 aaPredicted RBP16.18■□□□□ 0.18
LINC00642-201ENST00000419459 AIMP1Q12904 312 aaKnown RBP16.18■□□□□ 0.18
LINC00642-201ENST00000419459 FLIIQ13045 1269 aa16.18■□□□□ 0.18
LINC00642-201ENST00000419459 CCNL1Q9UK58 526 aaPredicted RBP16.18■□□□□ 0.18
LINC00642-201ENST00000419459 F6X3S4 739 aa16.17■□□□□ 0.18
LINC00642-201ENST00000419459 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.17■□□□□ 0.18
LINC00642-201ENST00000419459 LRRC4BQ9NT99 713 aa16.17■□□□□ 0.18
LINC00642-201ENST00000419459 ZBTB1Q9Y2K1 713 aa16.17■□□□□ 0.18
LINC00642-201ENST00000419459 STARD3NLO95772 234 aa16.16■□□□□ 0.18
LINC00642-201ENST00000419459 FKBP5Q13451 457 aaPredicted RBP16.16■□□□□ 0.18
LINC00642-201ENST00000419459 SMIM5Q71RC9 77 aa16.16■□□□□ 0.18
LINC00642-201ENST00000419459 LINC00116Q8NCU8 138 aa16.16■□□□□ 0.18
LINC00642-201ENST00000419459 ZKSCAN2Q63HK3 967 aa16.16■□□□□ 0.18
LINC00642-201ENST00000419459 ATF7IPQ6VMQ6 1270 aa16.16■□□□□ 0.18
LINC00642-201ENST00000419459 LRP10Q7Z4F1 713 aa16.16■□□□□ 0.18
LINC00642-201ENST00000419459 DDX21Q9NR30 783 aaKnown RBP eCLIP16.16■□□□□ 0.18
LINC00642-201ENST00000419459 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
LINC00642-201ENST00000419459 BRPF1P55201 1214 aaPredicted RBP16.15■□□□□ 0.18
LINC00642-201ENST00000419459 C8orf34Q49A92 452 aa16.15■□□□□ 0.18
LINC00642-201ENST00000419459 CICQ96RK0 1608 aaPredicted RBP16.14■□□□□ 0.18
LINC00642-201ENST00000419459 PROM2Q8N271 834 aa16.14■□□□□ 0.17
LINC00642-201ENST00000419459 ZNF831Q5JPB2 1677 aa16.14■□□□□ 0.17
LINC00642-201ENST00000419459 FTSJ3Q8IY81 847 aaKnown RBP16.14■□□□□ 0.17
LINC00642-201ENST00000419459 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
LINC00642-201ENST00000419459 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.14■□□□□ 0.17
LINC00642-201ENST00000419459 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
LINC00642-201ENST00000419459 XAGE3Q8WTP9 111 aa16.13■□□□□ 0.17
LINC00642-201ENST00000419459 ARXQ96QS3 562 aa16.13■□□□□ 0.17
LINC00642-201ENST00000419459 COG6Q9Y2V7 657 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms