RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 POLA2Q14181 598 aa17.92■□□□□ 0.46
HLA-DPA1-242ENST00000419277 KSR2Q6VAB6 950 aa17.92■□□□□ 0.46
HLA-DPA1-242ENST00000419277 BRINP3Q76B58 766 aa17.92■□□□□ 0.46
HLA-DPA1-242ENST00000419277 CIZ1Q9ULV3 898 aaPredicted RBP17.92■□□□□ 0.46
HLA-DPA1-242ENST00000419277 LRRFIP2Q9Y608 721 aaKnown RBP17.92■□□□□ 0.46
HLA-DPA1-242ENST00000419277 CSB-PGBD3P0DP91 1061 aa17.91■□□□□ 0.46
HLA-DPA1-242ENST00000419277 ZNF790Q6PG37 636 aa17.91■□□□□ 0.46
HLA-DPA1-242ENST00000419277 PHAXQ9H814 394 aaKnown RBP17.91■□□□□ 0.46
HLA-DPA1-242ENST00000419277 ERBB4Q15303 1308 aa17.9■□□□□ 0.46
HLA-DPA1-242ENST00000419277 PI4KAP2A4QPH2 592 aa17.9■□□□□ 0.46
HLA-DPA1-242ENST00000419277 MX1P20591 662 aa17.9■□□□□ 0.46
HLA-DPA1-242ENST00000419277 RABEP1Q15276 862 aa17.9■□□□□ 0.46
HLA-DPA1-242ENST00000419277 PI4KAP1Q8N8J0 262 aa17.9■□□□□ 0.46
HLA-DPA1-242ENST00000419277 AK9Q5TCS8 1911 aa17.9■□□□□ 0.46
HLA-DPA1-242ENST00000419277 WDR17Q8IZU2 1322 aa17.89■□□□□ 0.46
HLA-DPA1-242ENST00000419277 NECTIN2Q92692 538 aa17.89■□□□□ 0.46
HLA-DPA1-242ENST00000419277 CHMP5Q9NZZ3 219 aa17.89■□□□□ 0.46
HLA-DPA1-242ENST00000419277 UBR2Q8IWV8 1755 aa17.89■□□□□ 0.45
HLA-DPA1-242ENST00000419277 UTYO14607 1347 aa17.89■□□□□ 0.45
HLA-DPA1-242ENST00000419277 SDSP20132 328 aa17.89■□□□□ 0.45
HLA-DPA1-242ENST00000419277 LINS1Q8NG48 757 aa17.89■□□□□ 0.45
HLA-DPA1-242ENST00000419277 KIF1BPQ96EK5 621 aa17.89■□□□□ 0.45
HLA-DPA1-242ENST00000419277 PAPPAQ13219 1627 aa17.89■□□□□ 0.45
HLA-DPA1-242ENST00000419277 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
HLA-DPA1-242ENST00000419277 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
HLA-DPA1-242ENST00000419277 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
HLA-DPA1-242ENST00000419277 ERC1Q8IUD2 1116 aa17.88■□□□□ 0.45
HLA-DPA1-242ENST00000419277 PNMA6EA0A0J9YXQ4 647 aa17.87■□□□□ 0.45
HLA-DPA1-242ENST00000419277 ERC2O15083 957 aa17.86■□□□□ 0.45
HLA-DPA1-242ENST00000419277 DEKP35659 375 aaKnown RBP17.86■□□□□ 0.45
HLA-DPA1-242ENST00000419277 TTC5Q8N0Z6 440 aa17.86■□□□□ 0.45
HLA-DPA1-242ENST00000419277 EXOC6BQ9Y2D4 811 aa17.86■□□□□ 0.45
HLA-DPA1-242ENST00000419277 COL15A1P39059 1388 aa17.86■□□□□ 0.45
HLA-DPA1-242ENST00000419277 HSPA2P54652 639 aa17.86■□□□□ 0.45
HLA-DPA1-242ENST00000419277 SLAIN2Q9P270 581 aa17.86■□□□□ 0.45
HLA-DPA1-242ENST00000419277 KCNQ3O43525 872 aa17.85■□□□□ 0.45
HLA-DPA1-242ENST00000419277 SNRPA1P09661 255 aaKnown RBP17.85■□□□□ 0.45
HLA-DPA1-242ENST00000419277 NEXNQ0ZGT2 675 aa17.85■□□□□ 0.45
HLA-DPA1-242ENST00000419277 LARP1Q6PKG0 1096 aaKnown RBP17.85■□□□□ 0.45
HLA-DPA1-242ENST00000419277 PPP1R42Q7Z4L9 355 aa17.85■□□□□ 0.45
HLA-DPA1-242ENST00000419277 FMNL2Q96PY5 1086 aa17.85■□□□□ 0.45
HLA-DPA1-242ENST00000419277 USP42Q9H9J4 1324 aaKnown RBP17.85■□□□□ 0.45
HLA-DPA1-242ENST00000419277 SRGAP3O43295 1099 aa17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 GLI3P10071 1580 aa17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 KIF2CQ99661 725 aa17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 PRDM11Q9NQV5 511 aa17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 TTC41PQ6P2S7 1318 aa17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 K7ELQ4 463 aaPredicted RBP17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 SMARCA5O60264 1052 aaPredicted RBP17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 PTMSP20962 102 aa17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 C16orf71Q8IYS4 520 aaPredicted RBP17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 USP26Q9BXU7 913 aa17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 SLKQ9H2G2 1235 aaPredicted RBP17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 C9orf78Q9NZ63 289 aaPredicted RBP17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 MAP3K2Q9Y2U5 619 aa17.84■□□□□ 0.45
HLA-DPA1-242ENST00000419277 ANAPC15P60006 121 aa17.83■□□□□ 0.44
HLA-DPA1-242ENST00000419277 SHANK3Q9BYB0 1731 aa17.83■□□□□ 0.44
HLA-DPA1-242ENST00000419277 ARFGEF2Q9Y6D5 1785 aa17.82■□□□□ 0.44
HLA-DPA1-242ENST00000419277 ERVV-2B6SEH9 535 aa17.82■□□□□ 0.44
HLA-DPA1-242ENST00000419277 MCCP23508 829 aa17.82■□□□□ 0.44
HLA-DPA1-242ENST00000419277 OTUD7AQ8TE49 926 aaPredicted RBP17.82■□□□□ 0.44
HLA-DPA1-242ENST00000419277 GRM8O00222 908 aa17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 ST18O60284 1047 aa17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 RHPN1Q8TCX5 695 aa17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 GPATCH3Q96I76 525 aa17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 CARD10Q9BWT7 1032 aa17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 PLCH1Q4KWH8 1693 aa17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 APBB1O00213 710 aa17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 CYP27B1O15528 508 aa17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 SURF6O75683 361 aaKnown RBP17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 NBPF7P0C2Y1 421 aaPredicted RBP17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 DDIT3P35638 169 aa17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 IL17RAQ96F46 866 aa17.81■□□□□ 0.44
HLA-DPA1-242ENST00000419277 AFDNP55196 1824 aaKnown RBP17.8■□□□□ 0.44
HLA-DPA1-242ENST00000419277 MCM2P49736 904 aa17.8■□□□□ 0.44
HLA-DPA1-242ENST00000419277 NFATC2IPQ8NCF5 419 aa17.8■□□□□ 0.44
HLA-DPA1-242ENST00000419277 DDX17Q92841 729 aaKnown RBP17.8■□□□□ 0.44
HLA-DPA1-242ENST00000419277 COL22A1Q8NFW1 1626 aaPredicted RBP17.79■□□□□ 0.44
HLA-DPA1-242ENST00000419277 COL14A1Q05707 1796 aaKnown RBP17.79■□□□□ 0.44
HLA-DPA1-242ENST00000419277 DDX11L8A8MPP1 907 aa17.79■□□□□ 0.44
HLA-DPA1-242ENST00000419277 CABP4P57796 275 aa17.79■□□□□ 0.44
HLA-DPA1-242ENST00000419277 GSE1Q14687 1217 aa17.79■□□□□ 0.44
HLA-DPA1-242ENST00000419277 PDIA6Q15084 440 aa17.79■□□□□ 0.44
HLA-DPA1-242ENST00000419277 CABLES1Q8TDN4 633 aa17.79■□□□□ 0.44
HLA-DPA1-242ENST00000419277 FRAT2O75474 233 aaPredicted RBP17.78■□□□□ 0.44
HLA-DPA1-242ENST00000419277 CHRNA2Q15822 529 aa17.78■□□□□ 0.44
HLA-DPA1-242ENST00000419277 LRP6O75581 1613 aa17.78■□□□□ 0.44
HLA-DPA1-242ENST00000419277 HSP90AA1P07900 732 aaKnown RBP17.78■□□□□ 0.44
HLA-DPA1-242ENST00000419277 CLASRPQ8N2M8 674 aaKnown RBP17.78■□□□□ 0.44
HLA-DPA1-242ENST00000419277 ZCRB1Q8TBF4 217 aaKnown RBP17.78■□□□□ 0.44
HLA-DPA1-242ENST00000419277 ZNF496Q96IT1 587 aaPredicted RBP17.78■□□□□ 0.44
HLA-DPA1-242ENST00000419277 AHDC1Q5TGY3 1603 aaPredicted RBP17.78■□□□□ 0.44
HLA-DPA1-242ENST00000419277 TNS2Q63HR2 1409 aa17.77■□□□□ 0.44
HLA-DPA1-242ENST00000419277 KDM4FA0A1W2PPD8 638 aa17.77■□□□□ 0.44
HLA-DPA1-242ENST00000419277 GLRX3O76003 335 aaKnown RBP17.77■□□□□ 0.44
HLA-DPA1-242ENST00000419277 IL2RBP14784 551 aa17.77■□□□□ 0.44
HLA-DPA1-242ENST00000419277 TOM1L2Q6ZVM7 507 aa17.77■□□□□ 0.44
HLA-DPA1-242ENST00000419277 RIC3Q7Z5B4 369 aa17.77■□□□□ 0.44
HLA-DPA1-242ENST00000419277 CNTROBQ8N137 903 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms