RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 TSPOAP1O95153 1857 aa13.9□□□□□ -0.18
DDR1-232ENST00000418800 CYP2E1P05181 493 aaPredicted RBP13.89□□□□□ -0.19
DDR1-232ENST00000418800 NUP62CLQ9H1M0 184 aa13.89□□□□□ -0.19
DDR1-232ENST00000418800 GLI2P10070 1586 aa13.89□□□□□ -0.19
DDR1-232ENST00000418800 FAM177A1Q8N128 213 aaPredicted RBP13.89□□□□□ -0.19
DDR1-232ENST00000418800 UBE2HP62256 183 aa13.88□□□□□ -0.19
DDR1-232ENST00000418800 NCBP1Q09161 790 aaKnown RBP13.88□□□□□ -0.19
DDR1-232ENST00000418800 HSP90AB2PQ58FF8 381 aa13.88□□□□□ -0.19
DDR1-232ENST00000418800 FEZ1Q99689 392 aa13.88□□□□□ -0.19
DDR1-232ENST00000418800 PDRG1Q9NUG6 133 aa13.88□□□□□ -0.19
DDR1-232ENST00000418800 ABCC4O15439 1325 aa13.88□□□□□ -0.19
DDR1-232ENST00000418800 ZKSCAN1P17029 563 aaPredicted RBP13.88□□□□□ -0.19
DDR1-232ENST00000418800 KIAA1524Q8TCG1 905 aa13.88□□□□□ -0.19
DDR1-232ENST00000418800 A0A087WWV3 80 aa13.88□□□□□ -0.19
DDR1-232ENST00000418800 IRX5P78411 483 aaPredicted RBP13.88□□□□□ -0.19
DDR1-232ENST00000418800 ELF2Q15723 593 aa13.88□□□□□ -0.19
DDR1-232ENST00000418800 UVSSAQ2YD98 709 aa13.88□□□□□ -0.19
DDR1-232ENST00000418800 MAP3K11Q16584 847 aa13.87□□□□□ -0.19
DDR1-232ENST00000418800 CEP135Q66GS9 1140 aa13.87□□□□□ -0.19
DDR1-232ENST00000418800 CLIP2Q9UDT6 1046 aa13.87□□□□□ -0.19
DDR1-232ENST00000418800 SIL1Q9H173 461 aa13.87□□□□□ -0.19
DDR1-232ENST00000418800 DACT1Q9NYF0 836 aa13.87□□□□□ -0.19
DDR1-232ENST00000418800 LIMCH1Q9UPQ0 1083 aa13.87□□□□□ -0.19
DDR1-232ENST00000418800 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
DDR1-232ENST00000418800 ANO6Q4KMQ2 910 aa13.87□□□□□ -0.19
DDR1-232ENST00000418800 CLEC17AQ6ZS10 378 aa13.87□□□□□ -0.19
DDR1-232ENST00000418800 PLXNC1O60486 1568 aa13.86□□□□□ -0.19
DDR1-232ENST00000418800 GNAI3P08754 354 aa13.86□□□□□ -0.19
DDR1-232ENST00000418800 ZFYVE16Q7Z3T8 1539 aa13.86□□□□□ -0.19
DDR1-232ENST00000418800 HTATSF1O43719 755 aaKnown RBP13.86□□□□□ -0.19
DDR1-232ENST00000418800 F13A1P00488 732 aa13.86□□□□□ -0.19
DDR1-232ENST00000418800 ERCC4Q92889 916 aaPredicted RBP13.86□□□□□ -0.19
DDR1-232ENST00000418800 SPATA32Q96LK8 384 aa13.86□□□□□ -0.19
DDR1-232ENST00000418800 DNAJC25Q9H1X3 360 aa13.86□□□□□ -0.19
DDR1-232ENST00000418800 CALCOCO1Q9P1Z2 691 aa13.86□□□□□ -0.19
DDR1-232ENST00000418800 ZNF215Q9UL58 517 aaPredicted RBP13.86□□□□□ -0.19
DDR1-232ENST00000418800 KIF13AQ9H1H9 1805 aa13.86□□□□□ -0.19
DDR1-232ENST00000418800 CFAP74Q9C0B2 1584 aa13.86□□□□□ -0.19
DDR1-232ENST00000418800 IFIT2P09913 472 aaKnown RBP13.86□□□□□ -0.19
DDR1-232ENST00000418800 KRT85P78386 507 aa13.86□□□□□ -0.19
DDR1-232ENST00000418800 IPO4Q8TEX9 1081 aaKnown RBP13.86□□□□□ -0.19
DDR1-232ENST00000418800 NOL10Q9BSC4 688 aaKnown RBP13.86□□□□□ -0.19
DDR1-232ENST00000418800 CYP46A1Q9Y6A2 500 aa13.86□□□□□ -0.19
DDR1-232ENST00000418800 CCT4P50991 539 aaKnown RBP13.85□□□□□ -0.19
DDR1-232ENST00000418800 CNTROBQ8N137 903 aa13.85□□□□□ -0.19
DDR1-232ENST00000418800 PPRC1Q5VV67 1664 aaKnown RBP13.85□□□□□ -0.19
DDR1-232ENST00000418800 TPM3P06753 285 aa13.85□□□□□ -0.19
DDR1-232ENST00000418800 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
DDR1-232ENST00000418800 KCNF1Q9H3M0 494 aa13.85□□□□□ -0.19
DDR1-232ENST00000418800 AIMP1Q12904 312 aaKnown RBP13.84□□□□□ -0.19
DDR1-232ENST00000418800 C9orf78Q9NZ63 289 aaPredicted RBP13.84□□□□□ -0.19
DDR1-232ENST00000418800 ZNF165P49910 485 aa13.84□□□□□ -0.19
DDR1-232ENST00000418800 FLIIQ13045 1269 aa13.84□□□□□ -0.19
DDR1-232ENST00000418800 PPP1R42Q7Z4L9 355 aa13.84□□□□□ -0.19
DDR1-232ENST00000418800 INO80Q9ULG1 1556 aaPredicted RBP13.84□□□□□ -0.19
DDR1-232ENST00000418800 GUCY1B3Q02153 619 aa13.84□□□□□ -0.19
DDR1-232ENST00000418800 C10orf67Q8IYJ2 551 aa13.83□□□□□ -0.19
DDR1-232ENST00000418800 IL25Q9H293 177 aa13.83□□□□□ -0.2
DDR1-232ENST00000418800 TOMM22Q9NS69 142 aa13.83□□□□□ -0.2
DDR1-232ENST00000418800 RAB11FIP3O75154 756 aa13.83□□□□□ -0.2
DDR1-232ENST00000418800 LIG1P18858 919 aa13.83□□□□□ -0.2
DDR1-232ENST00000418800 HDGFL1Q5TGJ6 251 aa13.83□□□□□ -0.2
DDR1-232ENST00000418800 LRRC2Q9BYS8 371 aa13.83□□□□□ -0.2
DDR1-232ENST00000418800 RTL1A6NKG5 1358 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 SMTNL1A8MU46 457 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 LARGE1O95461 756 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 IL13P35225 146 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 TYRO3Q06418 890 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 STK11IPQ8N1F8 1099 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 NGDNQ8NEJ9 315 aaKnown RBP13.82□□□□□ -0.2
DDR1-232ENST00000418800 NEK11Q8NG66 645 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 DNAJC2Q99543 621 aaKnown RBP13.82□□□□□ -0.2
DDR1-232ENST00000418800 NSD2O96028 1365 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 TEX35Q5T0J7 233 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 ISM2Q6H9L7 571 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 NEO1Q92859 1461 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 ARID5BQ14865 1188 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 MNS1Q8NEH6 495 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 NUDT16Q96DE0 195 aaKnown RBP13.82□□□□□ -0.2
DDR1-232ENST00000418800 CTNNA3Q9UI47 895 aa13.82□□□□□ -0.2
DDR1-232ENST00000418800 ATP7AQ04656 1500 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 GABPB1Q06547 395 aaPredicted RBP13.81□□□□□ -0.2
DDR1-232ENST00000418800 CLASRPQ8N2M8 674 aaKnown RBP13.81□□□□□ -0.2
DDR1-232ENST00000418800 SDF4Q9BRK5 362 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 CCDC8Q9H0W5 538 aaPredicted RBP13.81□□□□□ -0.2
DDR1-232ENST00000418800 POGZQ7Z3K3 1410 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 MADDQ8WXG6 1647 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 AP5Z1O43299 807 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 SKILP12757 684 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 SF3A1Q15459 793 aaKnown RBP13.81□□□□□ -0.2
DDR1-232ENST00000418800 TERF2Q15554 542 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 USHBP1Q8N6Y0 703 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 FAM200AQ8TCP9 573 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 INTS4Q96HW7 963 aaKnown RBP13.81□□□□□ -0.2
DDR1-232ENST00000418800 SNX14Q9Y5W7 946 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 SMC2O95347 1197 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 CCDC30Q5VVM6 783 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 RUFY2Q8WXA3 655 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 CHMP4CQ96CF2 233 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 FSD1Q9BTV5 496 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms