RNA–Protein interactions for RNA: ENST00000418408.2

ITM2C-205, Transcript of integral membrane protein 2C, humanhuman

TSL 4

Gene ITM2C, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-205ENST00000418408 CCDC88AQ3V6T2 1871 aa21.47■■□□□ 1.03
ITM2C-205ENST00000418408 SIPA1L3O60292 1781 aaPredicted RBP21.46■■□□□ 1.03
ITM2C-205ENST00000418408 RNMTO43148 476 aaKnown RBP21.46■■□□□ 1.03
ITM2C-205ENST00000418408 PER1O15534 1290 aaPredicted RBP21.45■■□□□ 1.02
ITM2C-205ENST00000418408 CHRNA5P30532 468 aa21.45■■□□□ 1.02
ITM2C-205ENST00000418408 USPL1Q5W0Q7 1092 aa21.45■■□□□ 1.02
ITM2C-205ENST00000418408 PCGF6Q9BYE7 350 aa21.45■■□□□ 1.02
ITM2C-205ENST00000418408 BCL2L12Q9HB09 334 aa21.45■■□□□ 1.02
ITM2C-205ENST00000418408 NARFQ9UHQ1 456 aa21.45■■□□□ 1.02
ITM2C-205ENST00000418408 VSIG10Q8N0Z9 540 aa21.44■■□□□ 1.02
ITM2C-205ENST00000418408 COL15A1P39059 1388 aa21.44■■□□□ 1.02
ITM2C-205ENST00000418408 ANKRD31Q8N7Z5 1873 aa21.43■■□□□ 1.02
ITM2C-205ENST00000418408 NFIXQ14938 502 aa21.43■■□□□ 1.02
ITM2C-205ENST00000418408 ZPR1O75312 459 aa21.42■■□□□ 1.02
ITM2C-205ENST00000418408 COL3A1P02461 1466 aaPredicted RBP21.42■■□□□ 1.02
ITM2C-205ENST00000418408 SLC39A6Q13433 755 aa21.42■■□□□ 1.02
ITM2C-205ENST00000418408 ZC3H4Q9UPT8 1303 aaKnown RBP21.42■■□□□ 1.02
ITM2C-205ENST00000418408 ZBTB1Q9Y2K1 713 aa21.42■■□□□ 1.02
ITM2C-205ENST00000418408 KIF7Q2M1P5 1343 aa21.41■■□□□ 1.02
ITM2C-205ENST00000418408 FSTL1Q12841 308 aa21.41■■□□□ 1.02
ITM2C-205ENST00000418408 MTHFSDQ2M296 383 aaKnown RBP21.41■■□□□ 1.02
ITM2C-205ENST00000418408 RNF181Q9P0P0 153 aa21.41■■□□□ 1.02
ITM2C-205ENST00000418408 KDM2BQ8NHM5 1336 aa21.4■■□□□ 1.02
ITM2C-205ENST00000418408 DICER1Q9UPY3 1922 aaKnown RBP21.4■■□□□ 1.02
ITM2C-205ENST00000418408 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
ITM2C-205ENST00000418408 PRELPP51888 382 aa21.39■■□□□ 1.01
ITM2C-205ENST00000418408 TIAM2Q8IVF5 1701 aa21.38■■□□□ 1.01
ITM2C-205ENST00000418408 HMOX1P09601 288 aa21.38■■□□□ 1.01
ITM2C-205ENST00000418408 JMYQ8N9B5 988 aa21.38■■□□□ 1.01
ITM2C-205ENST00000418408 FER1L6Q2WGJ9 1857 aa21.38■■□□□ 1.01
ITM2C-205ENST00000418408 EIF5P55010 431 aaKnown RBP21.37■■□□□ 1.01
ITM2C-205ENST00000418408 CARMIL3Q8ND23 1372 aa21.36■■□□□ 1.01
ITM2C-205ENST00000418408 NPC1L1Q9UHC9 1359 aa21.36■■□□□ 1.01
ITM2C-205ENST00000418408 COL11A2P13942 1736 aaPredicted RBP21.35■■□□□ 1.01
ITM2C-205ENST00000418408 SERPINB2P05120 415 aa21.35■■□□□ 1.01
ITM2C-205ENST00000418408 KLRG1Q96E93 195 aa21.35■■□□□ 1.01
ITM2C-205ENST00000418408 DIAPH1O60610 1272 aaKnown RBP21.34■■□□□ 1.01
ITM2C-205ENST00000418408 RASSF7Q02833 373 aa21.34■■□□□ 1.01
ITM2C-205ENST00000418408 RRAGCQ9HB90 399 aa21.34■■□□□ 1.01
ITM2C-205ENST00000418408 LMNB1P20700 586 aa21.32■■□□□ 1
ITM2C-205ENST00000418408 HTRA3P83110 453 aa21.32■■□□□ 1
ITM2C-205ENST00000418408 C16orf71Q8IYS4 520 aaPredicted RBP21.32■■□□□ 1
ITM2C-205ENST00000418408 TTLL6Q8N841 843 aa21.32■■□□□ 1
ITM2C-205ENST00000418408 BCORQ6W2J9 1755 aa21.32■■□□□ 1
ITM2C-205ENST00000418408 ARFGEF2Q9Y6D5 1785 aa21.32■■□□□ 1
ITM2C-205ENST00000418408 GLTPD2A6NH11 291 aa21.31■■□□□ 1
ITM2C-205ENST00000418408 NFKBIEO00221 500 aa21.31■■□□□ 1
ITM2C-205ENST00000418408 IL17REQ8NFR9 667 aa21.31■■□□□ 1
ITM2C-205ENST00000418408 CEMIPQ8WUJ3 1361 aa21.31■■□□□ 1
ITM2C-205ENST00000418408 HEG1Q9ULI3 1381 aa21.31■■□□□ 1
ITM2C-205ENST00000418408 ZNF496Q96IT1 587 aaPredicted RBP21.3■■□□□ 1
ITM2C-205ENST00000418408 STARD3NLO95772 234 aa21.29■■□□□ 1
ITM2C-205ENST00000418408 CANXP27824 592 aaKnown RBP21.29■■□□□ 1
ITM2C-205ENST00000418408 ZNF790Q6PG37 636 aa21.29■■□□□ 1
ITM2C-205ENST00000418408 C2CD5Q86YS7 1000 aa21.29■■□□□ 1
ITM2C-205ENST00000418408 SMC1BQ8NDV3 1235 aa21.29■■□□□ 1
ITM2C-205ENST00000418408 A0A087WZG4 1122 aa21.28■■□□□ 1
ITM2C-205ENST00000418408 POTECB2RU33 542 aa21.28■■□□□ 1
ITM2C-205ENST00000418408 SLX4Q8IY92 1834 aa21.27■■□□□ 1
ITM2C-205ENST00000418408 H0YIN7 160 aa21.27■■□□□ 1
ITM2C-205ENST00000418408 TBC1D9BQ66K14 1250 aa21.27■■□□□ 1
ITM2C-205ENST00000418408 TEX13AQ9BXU3 409 aaPredicted RBP21.27■■□□□ 1
ITM2C-205ENST00000418408 PDZRN3Q9UPQ7 1066 aa21.27■■□□□ 1
ITM2C-205ENST00000418408 GNAT3A8MTJ3 354 aa21.26■□□□□ 0.99
ITM2C-205ENST00000418408 VEGFAP15692 232 aaPredicted RBP21.26■□□□□ 0.99
ITM2C-205ENST00000418408 IL6STP40189 918 aaPredicted RBP21.26■□□□□ 0.99
ITM2C-205ENST00000418408 CC2D1BQ5T0F9 858 aaKnown RBP21.26■□□□□ 0.99
ITM2C-205ENST00000418408 TTC5Q8N0Z6 440 aa21.26■□□□□ 0.99
ITM2C-205ENST00000418408 GAS2L2Q8NHY3 880 aa21.26■□□□□ 0.99
ITM2C-205ENST00000418408 BRIP1Q9BX63 1249 aa21.26■□□□□ 0.99
ITM2C-205ENST00000418408 CACNA1SQ13698 1873 aa21.26■□□□□ 0.99
ITM2C-205ENST00000418408 PRR5LQ6MZQ0 368 aa21.25■□□□□ 0.99
ITM2C-205ENST00000418408 LTBP3Q9NS15 1303 aa21.25■□□□□ 0.99
ITM2C-205ENST00000418408 CCER1Q8TC90 406 aaPredicted RBP21.24■□□□□ 0.99
ITM2C-205ENST00000418408 CAMTA2O94983 1202 aa21.22■□□□□ 0.99
ITM2C-205ENST00000418408 PDE6BP35913 854 aa21.22■□□□□ 0.99
ITM2C-205ENST00000418408 TEFQ10587 303 aa21.22■□□□□ 0.99
ITM2C-205ENST00000418408 COL13A1Q5TAT6 717 aaPredicted RBP21.21■□□□□ 0.99
ITM2C-205ENST00000418408 BICDL1Q6ZP65 573 aa21.21■□□□□ 0.99
ITM2C-205ENST00000418408 FMNL2Q96PY5 1086 aa21.21■□□□□ 0.99
ITM2C-205ENST00000418408 TBC1D2BQ9UPU7 963 aa21.21■□□□□ 0.99
ITM2C-205ENST00000418408 PHACTR3Q96KR7 559 aa21.2■□□□□ 0.98
ITM2C-205ENST00000418408 KCNQ3O43525 872 aa21.19■□□□□ 0.98
ITM2C-205ENST00000418408 A1BGP04217 495 aa21.19■□□□□ 0.98
ITM2C-205ENST00000418408 RSPH6AQ9H0K4 717 aa21.19■□□□□ 0.98
ITM2C-205ENST00000418408 SRGNP10124 158 aa21.18■□□□□ 0.98
ITM2C-205ENST00000418408 U2SURPO15042 1029 aaKnown RBP21.17■□□□□ 0.98
ITM2C-205ENST00000418408 C21orf2O43822 256 aa21.17■□□□□ 0.98
ITM2C-205ENST00000418408 STYK1Q6J9G0 422 aa21.17■□□□□ 0.98
ITM2C-205ENST00000418408 SCN4AP35499 1836 aa21.17■□□□□ 0.98
ITM2C-205ENST00000418408 RGL2O15211 777 aa21.16■□□□□ 0.98
ITM2C-205ENST00000418408 C7orf43Q8WVR3 580 aa21.16■□□□□ 0.98
ITM2C-205ENST00000418408 ZNF622Q969S3 477 aaKnown RBP eCLIP21.16■□□□□ 0.98
ITM2C-205ENST00000418408 SETDB2Q96T68 719 aa21.16■□□□□ 0.98
ITM2C-205ENST00000418408 USP16Q9Y5T5 823 aa21.16■□□□□ 0.98
ITM2C-205ENST00000418408 KLRG2A4D1S0 409 aaPredicted RBP21.15■□□□□ 0.98
ITM2C-205ENST00000418408 DPY19L2Q6NUT2 758 aa21.15■□□□□ 0.98
ITM2C-205ENST00000418408 CLEC4GQ6UXB4 293 aa21.15■□□□□ 0.98
ITM2C-205ENST00000418408 CCDC24Q8N4L8 307 aa21.15■□□□□ 0.98
ITM2C-205ENST00000418408 CNBD1Q8NA66 436 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms