RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 TMEM57Q8N5G2 664 aa13.04□□□□□ -0.32
PTCH1-205ENST00000418258 CTNNBL1Q8WYA6 563 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-205ENST00000418258 MPHOSPH6Q99547 160 aaKnown RBP13.04□□□□□ -0.32
PTCH1-205ENST00000418258 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
PTCH1-205ENST00000418258 SSRP1Q08945 709 aaKnown RBP13.04□□□□□ -0.32
PTCH1-205ENST00000418258 PSMD1Q99460 953 aa13.04□□□□□ -0.32
PTCH1-205ENST00000418258 BAG4O95429 457 aaKnown RBP13.04□□□□□ -0.32
PTCH1-205ENST00000418258 ARHGAP29Q52LW3 1261 aa13.04□□□□□ -0.32
PTCH1-205ENST00000418258 WDR70Q9NW82 654 aa13.04□□□□□ -0.32
PTCH1-205ENST00000418258 A0A087WZG4 1122 aa13.03□□□□□ -0.32
PTCH1-205ENST00000418258 C16orf71Q8IYS4 520 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-205ENST00000418258 VAT1LQ9HCJ6 419 aa13.03□□□□□ -0.32
PTCH1-205ENST00000418258 FILIP1Q7Z7B0 1213 aa13.03□□□□□ -0.32
PTCH1-205ENST00000418258 CDC5LQ99459 802 aaKnown RBP13.03□□□□□ -0.32
PTCH1-205ENST00000418258 THUMPD2Q9BTF0 503 aaKnown RBP13.03□□□□□ -0.32
PTCH1-205ENST00000418258 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTCH1-205ENST00000418258 VTI1AQ96AJ9 217 aa13.03□□□□□ -0.32
PTCH1-205ENST00000418258 COMMD10Q9Y6G5 202 aa13.03□□□□□ -0.32
PTCH1-205ENST00000418258 MACROD2A1Z1Q3 448 aa13.03□□□□□ -0.32
PTCH1-205ENST00000418258 C8orf76Q96K31 380 aa13.03□□□□□ -0.32
PTCH1-205ENST00000418258 DMRT2Q9Y5R5 561 aa13.03□□□□□ -0.32
PTCH1-205ENST00000418258 IFIT3O14879 490 aaKnown RBP13.03□□□□□ -0.32
PTCH1-205ENST00000418258 GUCY1B3Q02153 619 aa13.03□□□□□ -0.32
PTCH1-205ENST00000418258 CCDC113Q9H0I3 377 aa13.03□□□□□ -0.32
PTCH1-205ENST00000418258 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-205ENST00000418258 TROQ12816 1431 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-205ENST00000418258 BAG3O95817 575 aa13.02□□□□□ -0.32
PTCH1-205ENST00000418258 CCDC83Q8IWF9 413 aa13.02□□□□□ -0.32
PTCH1-205ENST00000418258 SMARCA5O60264 1052 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-205ENST00000418258 HMGN5P82970 282 aaKnown RBP13.02□□□□□ -0.32
PTCH1-205ENST00000418258 HLA-DOAP06340 250 aa13.02□□□□□ -0.33
PTCH1-205ENST00000418258 GOPCQ9HD26 462 aa13.02□□□□□ -0.33
PTCH1-205ENST00000418258 DYDC1Q8WWB3 177 aa13.02□□□□□ -0.33
PTCH1-205ENST00000418258 CABP5Q9NP86 173 aa13.02□□□□□ -0.33
PTCH1-205ENST00000418258 CD109Q6YHK3 1445 aa13.02□□□□□ -0.33
PTCH1-205ENST00000418258 CTNNA2P26232 953 aa13.02□□□□□ -0.33
PTCH1-205ENST00000418258 RPAP2Q8IXW5 612 aaPredicted RBP13.02□□□□□ -0.33
PTCH1-205ENST00000418258 CCDC8Q9H0W5 538 aaPredicted RBP13.02□□□□□ -0.33
PTCH1-205ENST00000418258 PHAXQ9H814 394 aaKnown RBP13.02□□□□□ -0.33
PTCH1-205ENST00000418258 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
PTCH1-205ENST00000418258 CCDC194A0A1B0GVG4 234 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 CCDC178Q5BJE1 867 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 PRPF40BQ6NWY9 871 aaKnown RBP13.01□□□□□ -0.33
PTCH1-205ENST00000418258 AMOTL2Q9Y2J4 779 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 MX1P20591 662 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 MAP3K11Q16584 847 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 GSTTP1A0A1W2PQM5 241 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 PDIA4P13667 645 aaKnown RBP13.01□□□□□ -0.33
PTCH1-205ENST00000418258 KRT28Q7Z3Y7 464 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 CCDC66A2RUB6 948 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 CCDC144CPQ8IYA2 1237 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 DAPK1P53355 1430 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 ARHGEF11O15085 1522 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 ZBTB3Q9H5J0 574 aa13.01□□□□□ -0.33
PTCH1-205ENST00000418258 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
PTCH1-205ENST00000418258 NAIPQ13075 1403 aa13□□□□□ -0.33
PTCH1-205ENST00000418258 TNNT1P13805 278 aa13□□□□□ -0.33
PTCH1-205ENST00000418258 PHF8Q9UPP1 1060 aa13□□□□□ -0.33
PTCH1-205ENST00000418258 PDE4BQ07343 736 aa13□□□□□ -0.33
PTCH1-205ENST00000418258 CETN1Q12798 172 aa13□□□□□ -0.33
PTCH1-205ENST00000418258 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
PTCH1-205ENST00000418258 HOOK3Q86VS8 718 aa13□□□□□ -0.33
PTCH1-205ENST00000418258 PUF60Q9UHX1 559 aaKnown RBP13□□□□□ -0.33
PTCH1-205ENST00000418258 CDK13Q14004 1512 aaKnown RBP12.99□□□□□ -0.33
PTCH1-205ENST00000418258 TSPY2A6NKD2 308 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 GOLGA8BA8MQT2 603 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 CCDC102AQ96A19 550 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 TTC16Q8NEE8 873 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 CALML4Q96GE6 196 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 KIF5BP33176 963 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 USP8P40818 1118 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 CWC25Q9NXE8 425 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-205ENST00000418258 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 MAP2K1Q02750 393 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-205ENST00000418258 SPTY2D1Q68D10 685 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-205ENST00000418258 MAP3K2Q9Y2U5 619 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 GOLGA6L10A0A0M3HER8 536 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 DNA2P51530 1060 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-205ENST00000418258 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 NBPF5PQ86XG9 351 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-205ENST00000418258 CCDC12Q8WUD4 166 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-205ENST00000418258 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 CCDC141Q6ZP82 1450 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 FERMT3Q86UX7 667 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 CKAP2LQ8IYA6 745 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 KAT14Q9H8E8 782 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 IQGAP2Q13576 1575 aa12.99□□□□□ -0.33
PTCH1-205ENST00000418258 BICD1Q96G01 975 aa12.98□□□□□ -0.33
PTCH1-205ENST00000418258 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
PTCH1-205ENST00000418258 CCT2P78371 535 aaKnown RBP12.98□□□□□ -0.33
PTCH1-205ENST00000418258 GRIPAP1Q4V328 841 aa12.98□□□□□ -0.33
PTCH1-205ENST00000418258 LDHAL6AQ6ZMR3 332 aa12.98□□□□□ -0.33
PTCH1-205ENST00000418258 PRKCSHP14314 528 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-205ENST00000418258 TEX13AQ9BXU3 409 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-205ENST00000418258 F6X3S4 739 aa12.98□□□□□ -0.33
PTCH1-205ENST00000418258 NME9Q86XW9 330 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms