RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 ZNF445P59923 1031 aa14.16□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 LGR6Q9HBX8 967 aa14.16□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 NBPF6Q5VWK0 638 aa14.16□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 MPRIPQ6WCQ1 1025 aa14.16□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 NBPF4Q96M43 638 aa14.16□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 ANXA1P04083 346 aa14.15□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 HOXB7P09629 217 aa14.15□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 EIF4A1P60842 406 aaKnown RBP14.15□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 RUFY2Q8WXA3 655 aa14.15□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 INTS4Q96HW7 963 aaKnown RBP14.15□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 UNC5CLQ8IV45 518 aa14.15□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 DBF4Q9UBU7 674 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 NALCNQ8IZF0 1738 aa14.15□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 NBPF7P0C2Y1 421 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 SALL3Q9BXA9 1300 aa14.15□□□□□ -0.14
CSPG4P3Y-201ENST00000418188 IFIT2P09913 472 aaKnown RBP14.14□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 AMOTQ4VCS5 1084 aa14.14□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 SLIT1O75093 1534 aa14.14□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 KCNJ4P48050 445 aa14.14□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 CWC27Q6UX04 472 aaKnown RBP14.14□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 RIMS1Q86UR5 1692 aaKnown RBP14.14□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 RBM27Q9P2N5 1060 aaKnown RBP14.14□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 ARHGAP23Q9P227 1491 aa14.13□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 WDR33Q9C0J8 1336 aaKnown RBP14.13□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 GLRX3O76003 335 aaKnown RBP14.13□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 LRRC59Q96AG4 307 aaKnown RBP14.13□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 SYCE3A1L190 88 aa14.13□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 EPB41L2O43491 1005 aaKnown RBP14.13□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 ZDHHC9Q9Y397 364 aa14.13□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 PHF14O94880 888 aa14.12□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 DDX58O95786 925 aaKnown RBP14.12□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 PRIM1P49642 420 aaKnown RBP14.12□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 TPRNQ4KMQ1 711 aa14.12□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 CUL4AQ13619 759 aa14.12□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 BEND3Q5T5X7 828 aa14.12□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 ERC1Q8IUD2 1116 aa14.12□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 BRD1O95696 1058 aa14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 HSPA4P34932 840 aa14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 ZSCAN30Q86W11 494 aa14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 GPT2Q8TD30 523 aa14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 PXDNLA1KZ92 1463 aa14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 KCNQ3O43525 872 aa14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 XPCQ01831 940 aaPredicted RBP14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 POLA2Q14181 598 aa14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 MAP3K2Q9Y2U5 619 aa14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 KIF13AQ9H1H9 1805 aa14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 SGSM2O43147 1006 aa14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 CHAMP1Q96JM3 812 aa14.11□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 FMN2Q9NZ56 1722 aa14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 PPP1R9BQ96SB3 815 aa14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 AK9Q5TCS8 1911 aa14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 PTMAP06454 111 aaKnown RBP14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 AIMP1Q12904 312 aaKnown RBP14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 SPG7Q9UQ90 795 aa14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 SMC3Q9UQE7 1217 aa14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 PIK3C2AO00443 1686 aa14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 G3BP1Q13283 466 aaKnown RBP eCLIP14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 LRSAM1Q6UWE0 723 aa14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 RNF214Q8ND24 703 aa14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 ATP6V1DQ9Y5K8 247 aa14.1□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 RAD50Q92878 1312 aa14.09□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 ZKSCAN1P17029 563 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 RBSNQ9H1K0 784 aa14.09□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 ECHDC1Q9NTX5 307 aa14.09□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 TTC41PQ6P2S7 1318 aa14.09□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 CEMIPQ8WUJ3 1361 aa14.09□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 GCP02774 474 aa14.09□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 ALDH1L1O75891 902 aa14.08□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 PI4K2BQ8TCG2 481 aa14.08□□□□□ -0.15
CSPG4P3Y-201ENST00000418188 TMEM63CQ9P1W3 806 aa14.08□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 LIMCH1Q9UPQ0 1083 aa14.08□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 RNMTO43148 476 aaKnown RBP14.08□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 CASTP20810 708 aaKnown RBP14.08□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 NEXNQ0ZGT2 675 aa14.08□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 KSR2Q6VAB6 950 aa14.08□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 AACSQ86V21 672 aa14.08□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 ERBB4Q15303 1308 aa14.08□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 ANKRD24Q8TF21 1146 aa14.07□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 GDPD2Q9HCC8 539 aa14.07□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 HYPKQ9NX55 129 aa14.07□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 RIC3Q7Z5B4 369 aa14.07□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 TSPY26PQ9H489 355 aa14.07□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 SNX14Q9Y5W7 946 aa14.07□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 RGPD8O14715 1765 aaPredicted RBP14.07□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 RAPGEF4Q8WZA2 1011 aa14.06□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 CWF19L2Q2TBE0 894 aaKnown RBP14.06□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 LARP6Q9BRS8 491 aaKnown RBP14.06□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 JAKMIP1Q96N16 626 aaKnown RBP14.06□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 CYP46A1Q9Y6A2 500 aa14.06□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 AK2P54819 239 aa14.05□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 CSPP1Q1MSJ5 1256 aa14.05□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 PA2G4Q9UQ80 394 aaKnown RBP14.05□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 HIP1O00291 1037 aa14.05□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 GIGYF1O75420 1035 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 PRPF40BQ6NWY9 871 aaKnown RBP14.05□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 IL25Q9H293 177 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms