RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 PALM3A6NDB9 673 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P20-201ENST00000417997 ZBTB7BO15156 539 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P20-201ENST00000417997 ATP4AP20648 1035 aa7.06□□□□□ -1.28
HMGB3P20-201ENST00000417997 RASA1P20936 1047 aa7.06□□□□□ -1.28
HMGB3P20-201ENST00000417997 MARSP56192 900 aaKnown RBP7.06□□□□□ -1.28
HMGB3P20-201ENST00000417997 LBRQ14739 615 aaKnown RBP7.06□□□□□ -1.28
HMGB3P20-201ENST00000417997 SLC9A9Q8IVB4 645 aa7.06□□□□□ -1.28
HMGB3P20-201ENST00000417997 C1orf216Q8TAB5 229 aa7.06□□□□□ -1.28
HMGB3P20-201ENST00000417997 CFHR5Q9BXR6 569 aa7.06□□□□□ -1.28
HMGB3P20-201ENST00000417997 MAFBQ9Y5Q3 323 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P20-201ENST00000417997 ZCCHC6Q5VYS8 1495 aaKnown RBP7.05□□□□□ -1.28
HMGB3P20-201ENST00000417997 CELA2BP08218 269 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P20-201ENST00000417997 LARGE2Q8N3Y3 721 aa7.05□□□□□ -1.28
HMGB3P20-201ENST00000417997 CRISPLD1Q9H336 500 aa7.05□□□□□ -1.28
HMGB3P20-201ENST00000417997 A0A1W2PNR3 127 aa7.04□□□□□ -1.28
HMGB3P20-201ENST00000417997 SFI1A8K8P3 1242 aa7.04□□□□□ -1.28
HMGB3P20-201ENST00000417997 BMP4P12644 408 aa7.04□□□□□ -1.28
HMGB3P20-201ENST00000417997 LMOD1P29536 600 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P20-201ENST00000417997 FIGNL1Q6PIW4 674 aa7.04□□□□□ -1.28
HMGB3P20-201ENST00000417997 LARP1Q6PKG0 1096 aaKnown RBP7.04□□□□□ -1.28
HMGB3P20-201ENST00000417997 L3MBTL2Q969R5 705 aa7.04□□□□□ -1.28
HMGB3P20-201ENST00000417997 PPP1R12CQ9BZL4 782 aa7.04□□□□□ -1.28
HMGB3P20-201ENST00000417997 ZCCHC2Q9C0B9 1178 aaKnown RBP7.04□□□□□ -1.28
HMGB3P20-201ENST00000417997 ENAMQ9NRM1 1142 aa7.04□□□□□ -1.28
HMGB3P20-201ENST00000417997 ATXN7L1Q9ULK2 861 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P20-201ENST00000417997 DCDC2BA2VCK2 349 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 ATXN7O15265 892 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 BNIP3LO60238 219 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 ARHGEF15O94989 841 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 FGFR3P22607 806 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 NOS2P35228 1153 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 TXLNAP40222 546 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 MAP2K3P46734 347 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 EPHA4P54764 986 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 UBAP2LQ14157 1087 aaKnown RBP7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 ZNF295-AS1Q8N0V1 137 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 TSEN2Q8NCE0 465 aaKnown RBP7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 NEDD1Q8NHV4 660 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 ZDHHC1Q8WTX9 485 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 ACDQ96AP0 544 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 TSPAN10Q9H1Z9 355 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 NEUROD4Q9HD90 331 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 ZDHHC3Q9NYG2 299 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 CHMP3Q9Y3E7 222 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 PCDHGC4Q9Y5F7 938 aa7.03□□□□□ -1.28
HMGB3P20-201ENST00000417997 SERTM1A2A2V5 107 aa7.02□□□□□ -1.29
HMGB3P20-201ENST00000417997 KHNYNO15037 678 aaKnown RBP7.02□□□□□ -1.29
HMGB3P20-201ENST00000417997 BCRP11274 1271 aa7.02□□□□□ -1.29
HMGB3P20-201ENST00000417997 FOXK2Q01167 660 aa7.02□□□□□ -1.29
HMGB3P20-201ENST00000417997 NLRP8Q86W28 1048 aa7.02□□□□□ -1.29
HMGB3P20-201ENST00000417997 ZIC5Q96T25 663 aa7.02□□□□□ -1.29
HMGB3P20-201ENST00000417997 OXCT2Q9BYC2 517 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P20-201ENST00000417997 PPP1R12BO60237 982 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P20-201ENST00000417997 CTBSQ01459 385 aa7.01□□□□□ -1.29
HMGB3P20-201ENST00000417997 TEAD4Q15561 434 aa7.01□□□□□ -1.29
HMGB3P20-201ENST00000417997 SIX5Q8N196 739 aa7.01□□□□□ -1.29
HMGB3P20-201ENST00000417997 KLRG1Q96E93 195 aa7.01□□□□□ -1.29
HMGB3P20-201ENST00000417997 RNF225M0QZC1 329 aaPredicted RBP7□□□□□ -1.29
HMGB3P20-201ENST00000417997 LGR5O75473 907 aa7□□□□□ -1.29
HMGB3P20-201ENST00000417997 CD33P20138 364 aa7□□□□□ -1.29
HMGB3P20-201ENST00000417997 IRS1P35568 1242 aa7□□□□□ -1.29
HMGB3P20-201ENST00000417997 SEC13P55735 322 aa7□□□□□ -1.29
HMGB3P20-201ENST00000417997 SH3PXD2AQ5TCZ1 1133 aa7□□□□□ -1.29
HMGB3P20-201ENST00000417997 LRRC69Q6ZNQ3 347 aa7□□□□□ -1.29
HMGB3P20-201ENST00000417997 CHMP7Q8WUX9 453 aaPredicted RBP7□□□□□ -1.29
HMGB3P20-201ENST00000417997 HINFPQ9BQA5 517 aa7□□□□□ -1.29
HMGB3P20-201ENST00000417997 VRTNQ9H8Y1 702 aa7□□□□□ -1.29
HMGB3P20-201ENST00000417997 NDFIP2Q9NV92 336 aa7□□□□□ -1.29
HMGB3P20-201ENST00000417997 HCN4Q9Y3Q4 1203 aa7□□□□□ -1.29
HMGB3P20-201ENST00000417997 MAPTP10636 758 aaKnown RBP6.99□□□□□ -1.29
HMGB3P20-201ENST00000417997 PSMA6P60900 246 aaKnown RBP6.99□□□□□ -1.29
HMGB3P20-201ENST00000417997 DPYDQ12882 1025 aa6.99□□□□□ -1.29
HMGB3P20-201ENST00000417997 CRTC2Q53ET0 693 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P20-201ENST00000417997 CDCA8Q53HL2 280 aa6.99□□□□□ -1.29
HMGB3P20-201ENST00000417997 RHPN1Q8TCX5 695 aa6.99□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L15C9J2P7 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L10C9JJH3 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L13C9JLJ4 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L12C9JPN9 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L11C9JVI0 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L21D6R901 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L18D6R9N7 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L22D6RA61 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L17D6RBQ6 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L19D6RCP7 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L20D6RJB6 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 M0R2N6 131 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 EML1O00423 815 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 C2CD2LO14523 706 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 RFX1P22670 979 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 TNP2Q05952 138 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 USP17L24Q0WX57 530 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 KANK4Q5T7N3 995 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 PODNQ7Z5L7 613 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 GALNT6Q8NCL4 622 aa6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 SCG3Q8WXD2 468 aaKnown RBP6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 SCARF2Q96GP6 870 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P20-201ENST00000417997 OIP5O43482 229 aa6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 AMPD1P23109 780 aa6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 RASSF7Q02833 373 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms