RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 E9PCH4 1651 aa8.24□□□□□ -1.09
ECHDC1-206ENST00000417628 ANKRD30AQ9BXX3 1397 aa8.23□□□□□ -1.09
ECHDC1-206ENST00000417628 CRYBG1Q9Y4K1 1723 aa8.23□□□□□ -1.09
ECHDC1-206ENST00000417628 LRRC37A3O60309 1634 aa8.23□□□□□ -1.09
ECHDC1-206ENST00000417628 CCDC85CA6NKD9 419 aa8.23□□□□□ -1.09
ECHDC1-206ENST00000417628 NBPF26B4DH59 902 aa8.23□□□□□ -1.09
ECHDC1-206ENST00000417628 SMAPO00193 183 aa8.23□□□□□ -1.09
ECHDC1-206ENST00000417628 ZNF827Q17R98 1081 aa8.23□□□□□ -1.09
ECHDC1-206ENST00000417628 PACS2Q86VP3 889 aa8.23□□□□□ -1.09
ECHDC1-206ENST00000417628 TMEM134Q9H6X4 195 aa8.23□□□□□ -1.09
ECHDC1-206ENST00000417628 KIAA0232Q92628 1395 aa8.22□□□□□ -1.09
ECHDC1-206ENST00000417628 CICQ96RK0 1608 aaPredicted RBP8.22□□□□□ -1.09
ECHDC1-206ENST00000417628 BCL9O00512 1426 aa8.22□□□□□ -1.09
ECHDC1-206ENST00000417628 ALS2Q96Q42 1657 aa8.22□□□□□ -1.09
ECHDC1-206ENST00000417628 CTCFP49711 727 aaPredicted RBP8.22□□□□□ -1.09
ECHDC1-206ENST00000417628 EVA1CP58658 441 aa8.22□□□□□ -1.09
ECHDC1-206ENST00000417628 DIXDC1Q155Q3 683 aa8.22□□□□□ -1.09
ECHDC1-206ENST00000417628 CHRNA2Q15822 529 aa8.22□□□□□ -1.09
ECHDC1-206ENST00000417628 KCNK17Q96T54 332 aa8.22□□□□□ -1.09
ECHDC1-206ENST00000417628 TRPM3Q9HCF6 1732 aaPredicted RBP8.22□□□□□ -1.09
ECHDC1-206ENST00000417628 GOLGB1Q14789 3259 aaKnown RBP8.22□□□□□ -1.09
ECHDC1-206ENST00000417628 DDX11L8A8MPP1 907 aa8.21□□□□□ -1.1
ECHDC1-206ENST00000417628 RIC3Q7Z5B4 369 aa8.21□□□□□ -1.1
ECHDC1-206ENST00000417628 DAPK1P53355 1430 aa8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 C10orf71Q711Q0 1435 aa8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 QSER1Q2KHR3 1735 aa8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 SPTLC1O15269 473 aa8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 TRAK2O60296 914 aa8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 RFC5P40937 340 aa8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 LARP1Q6PKG0 1096 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 SULF1Q8IWU6 871 aa8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 SMC1BQ8NDV3 1235 aa8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 AIDAQ96BJ3 306 aa8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 BCL11AQ9H165 835 aa8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 CLTCL1P53675 1640 aa8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 PHRF1Q9P1Y6 1649 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-206ENST00000417628 MOXD2PA6NHM9 499 aa8.19□□□□□ -1.1
ECHDC1-206ENST00000417628 TUSC1Q2TAM9 212 aa8.19□□□□□ -1.1
ECHDC1-206ENST00000417628 PPP2R2DQ66LE6 453 aa8.19□□□□□ -1.1
ECHDC1-206ENST00000417628 RSBN1LQ6PCB5 846 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-206ENST00000417628 POM121Q96HA1 1249 aa8.19□□□□□ -1.1
ECHDC1-206ENST00000417628 ZBED2Q9BTP6 218 aa8.19□□□□□ -1.1
ECHDC1-206ENST00000417628 KIAA1468Q9P260 1216 aa8.19□□□□□ -1.1
ECHDC1-206ENST00000417628 CD2APQ9Y5K6 639 aa8.19□□□□□ -1.1
ECHDC1-206ENST00000417628 PNPLA7Q6ZV29 1317 aa8.19□□□□□ -1.1
ECHDC1-206ENST00000417628 BRD4O60885 1362 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-206ENST00000417628 APBB1O00213 710 aa8.18□□□□□ -1.1
ECHDC1-206ENST00000417628 PSEN2P49810 448 aa8.18□□□□□ -1.1
ECHDC1-206ENST00000417628 DDB1Q16531 1140 aa8.18□□□□□ -1.1
ECHDC1-206ENST00000417628 PRPF38BQ5VTL8 546 aaKnown RBP8.18□□□□□ -1.1
ECHDC1-206ENST00000417628 BANK1Q8NDB2 785 aa8.18□□□□□ -1.1
ECHDC1-206ENST00000417628 SNRKQ9NRH2 765 aa8.18□□□□□ -1.1
ECHDC1-206ENST00000417628 NDUFV2P19404 249 aa8.17□□□□□ -1.1
ECHDC1-206ENST00000417628 POTEEQ6S8J3 1075 aa8.17□□□□□ -1.1
ECHDC1-206ENST00000417628 NUTM1Q86Y26 1132 aa8.17□□□□□ -1.1
ECHDC1-206ENST00000417628 PXDNLA1KZ92 1463 aa8.17□□□□□ -1.1
ECHDC1-206ENST00000417628 IFT172Q9UG01 1749 aa8.17□□□□□ -1.1
ECHDC1-206ENST00000417628 SPDYE5A6NIY4 337 aa8.16□□□□□ -1.1
ECHDC1-206ENST00000417628 LBX1P52954 281 aa8.16□□□□□ -1.1
ECHDC1-206ENST00000417628 GPRASP1Q5JY77 1395 aa8.16□□□□□ -1.1
ECHDC1-206ENST00000417628 WAPLQ7Z5K2 1190 aa8.16□□□□□ -1.1
ECHDC1-206ENST00000417628 IGSF1Q8N6C5 1336 aa8.16□□□□□ -1.1
ECHDC1-206ENST00000417628 ARID3AQ99856 593 aa8.16□□□□□ -1.1
ECHDC1-206ENST00000417628 ANKRD50Q9ULJ7 1429 aa8.16□□□□□ -1.1
ECHDC1-206ENST00000417628 AKAP12Q02952 1782 aa8.15□□□□□ -1.1
ECHDC1-206ENST00000417628 PLEKHG2Q9H7P9 1386 aa8.15□□□□□ -1.1
ECHDC1-206ENST00000417628 PLEKHH1Q9ULM0 1364 aa8.15□□□□□ -1.1
ECHDC1-206ENST00000417628 GJA5P36382 358 aa8.15□□□□□ -1.1
ECHDC1-206ENST00000417628 QPCTQ16769 361 aa8.15□□□□□ -1.1
ECHDC1-206ENST00000417628 TMEM259Q4ZIN3 620 aa8.15□□□□□ -1.1
ECHDC1-206ENST00000417628 MARCH10Q8NA82 808 aaPredicted RBP8.15□□□□□ -1.1
ECHDC1-206ENST00000417628 CHIC2Q9UKJ5 165 aa8.15□□□□□ -1.1
ECHDC1-206ENST00000417628 PCDHB15Q9Y5E8 787 aa8.15□□□□□ -1.1
ECHDC1-206ENST00000417628 LMO7Q8WWI1 1683 aa8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 CRB1P82279 1406 aa8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 ANKRD30BQ9BXX2 1392 aa8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 KDM2BQ8NHM5 1336 aa8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 LILRB3O75022 631 aa8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 ZC3H6P61129 1189 aaKnown RBP8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 CSPP1Q1MSJ5 1256 aa8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 RDH13Q8NBN7 331 aa8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 TFCP2L1Q9NZI6 479 aa8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 COG6Q9Y2V7 657 aa8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 RGPD8O14715 1765 aaPredicted RBP8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 NHSQ6T4R5 1651 aa8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 PCNTO95613 3336 aa8.14□□□□□ -1.11
ECHDC1-206ENST00000417628 KCPQ6ZWJ8 1503 aa8.13□□□□□ -1.11
ECHDC1-206ENST00000417628 ARHGAP33O14559 1287 aa8.13□□□□□ -1.11
ECHDC1-206ENST00000417628 KDM4AO75164 1064 aa8.13□□□□□ -1.11
ECHDC1-206ENST00000417628 SLC10A3P09131 477 aa8.13□□□□□ -1.11
ECHDC1-206ENST00000417628 GCGRP47871 477 aa8.13□□□□□ -1.11
ECHDC1-206ENST00000417628 RTL5Q5HYW3 569 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-206ENST00000417628 SWT1Q5T5J6 900 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-206ENST00000417628 DMRTA1Q5VZB9 504 aa8.13□□□□□ -1.11
ECHDC1-206ENST00000417628 SLC4A5Q9BY07 1137 aa8.13□□□□□ -1.11
ECHDC1-206ENST00000417628 TNRC6CQ9HCJ0 1690 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-206ENST00000417628 COL5A2P05997 1499 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-206ENST00000417628 ANKARQ7Z5J8 1434 aa8.12□□□□□ -1.11
ECHDC1-206ENST00000417628 KNDC1Q76NI1 1749 aa8.12□□□□□ -1.11
ECHDC1-206ENST00000417628 ACIN1Q9UKV3 1341 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms