RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 LMNB1P20700 586 aa24.57■■□□□ 1.52
VCP-202ENST00000417448 POTECB2RU33 542 aa24.56■■□□□ 1.52
VCP-202ENST00000417448 INTS5Q6P9B9 1019 aaKnown RBP24.56■■□□□ 1.52
VCP-202ENST00000417448 ZNF530Q6P9A1 599 aaPredicted RBP24.55■■□□□ 1.52
VCP-202ENST00000417448 SCN11AQ9UI33 1791 aa24.54■■□□□ 1.52
VCP-202ENST00000417448 PLEKHO1Q53GL0 409 aaPredicted RBP24.53■■□□□ 1.52
VCP-202ENST00000417448 USPL1Q5W0Q7 1092 aa24.53■■□□□ 1.52
VCP-202ENST00000417448 NFATC2IPQ8NCF5 419 aa24.53■■□□□ 1.52
VCP-202ENST00000417448 PANK3Q9H999 370 aa24.53■■□□□ 1.52
VCP-202ENST00000417448 DICER1Q9UPY3 1922 aaKnown RBP24.53■■□□□ 1.52
VCP-202ENST00000417448 TNNT2P45379 298 aaPredicted RBP24.52■■□□□ 1.52
VCP-202ENST00000417448 NFKBIEO00221 500 aa24.51■■□□□ 1.51
VCP-202ENST00000417448 MTHFSP49914 203 aa24.51■■□□□ 1.51
VCP-202ENST00000417448 NFIXQ14938 502 aa24.5■■□□□ 1.51
VCP-202ENST00000417448 SOS1Q07889 1333 aaPredicted RBP24.5■■□□□ 1.51
VCP-202ENST00000417448 ZEB1P37275 1124 aaPredicted RBP24.49■■□□□ 1.51
VCP-202ENST00000417448 CARMIL3Q8ND23 1372 aa24.49■■□□□ 1.51
VCP-202ENST00000417448 FER1L6Q2WGJ9 1857 aa24.49■■□□□ 1.51
VCP-202ENST00000417448 ZPR1O75312 459 aa24.48■■□□□ 1.51
VCP-202ENST00000417448 AMOTQ4VCS5 1084 aa24.48■■□□□ 1.51
VCP-202ENST00000417448 VIRMAQ69YN4 1812 aaKnown RBP24.48■■□□□ 1.51
VCP-202ENST00000417448 AEBP1Q8IUX7 1158 aa24.48■■□□□ 1.51
VCP-202ENST00000417448 DNAJC10Q8IXB1 793 aa24.48■■□□□ 1.51
VCP-202ENST00000417448 ANKRD31Q8N7Z5 1873 aa24.48■■□□□ 1.51
VCP-202ENST00000417448 TTLL6Q8N841 843 aa24.47■■□□□ 1.51
VCP-202ENST00000417448 BCL2L12Q9HB09 334 aa24.47■■□□□ 1.51
VCP-202ENST00000417448 MKRN1Q9UHC7 482 aaKnown RBP24.47■■□□□ 1.51
VCP-202ENST00000417448 COL11A2P13942 1736 aaPredicted RBP24.45■■□□□ 1.5
VCP-202ENST00000417448 CREBZFQ9NS37 354 aa24.45■■□□□ 1.5
VCP-202ENST00000417448 COL15A1P39059 1388 aa24.44■■□□□ 1.5
VCP-202ENST00000417448 FOXN1O15353 648 aa24.44■■□□□ 1.5
VCP-202ENST00000417448 POTEIP0CG38 1075 aa24.44■■□□□ 1.5
VCP-202ENST00000417448 POTEJP0CG39 1038 aa24.44■■□□□ 1.5
VCP-202ENST00000417448 C1orf141Q5JVX7 400 aa24.44■■□□□ 1.5
VCP-202ENST00000417448 C2CD5Q86YS7 1000 aa24.44■■□□□ 1.5
VCP-202ENST00000417448 NARFQ9UHQ1 456 aa24.44■■□□□ 1.5
VCP-202ENST00000417448 SERPINB2P05120 415 aa24.43■■□□□ 1.5
VCP-202ENST00000417448 CYP19A1P11511 503 aaPredicted RBP24.42■■□□□ 1.5
VCP-202ENST00000417448 ZBTB1Q9Y2K1 713 aa24.41■■□□□ 1.5
VCP-202ENST00000417448 SLC34A2O95436 690 aa24.4■■□□□ 1.5
VCP-202ENST00000417448 CNGB1Q14028 1251 aaPredicted RBP24.4■■□□□ 1.5
VCP-202ENST00000417448 CHADLQ6NUI6 762 aa24.4■■□□□ 1.5
VCP-202ENST00000417448 DPY19L2Q6NUT2 758 aa24.4■■□□□ 1.5
VCP-202ENST00000417448 CACNA1SQ13698 1873 aa24.4■■□□□ 1.5
VCP-202ENST00000417448 MRC1P22897 1456 aa24.39■■□□□ 1.5
VCP-202ENST00000417448 H0YIN7 160 aa24.39■■□□□ 1.49
VCP-202ENST00000417448 CNTNAP1P78357 1384 aa24.39■■□□□ 1.49
VCP-202ENST00000417448 ERFEQ4G0M1 354 aa24.38■■□□□ 1.49
VCP-202ENST00000417448 SLC39A6Q13433 755 aa24.37■■□□□ 1.49
VCP-202ENST00000417448 PRDM10Q9NQV6 1147 aa24.37■■□□□ 1.49
VCP-202ENST00000417448 UBR2Q8IWV8 1755 aa24.37■■□□□ 1.49
VCP-202ENST00000417448 SULT6B1Q6IMI4 303 aa24.36■■□□□ 1.49
VCP-202ENST00000417448 SLC52A2Q9HAB3 445 aa24.36■■□□□ 1.49
VCP-202ENST00000417448 ZNF219Q9P2Y4 722 aaPredicted RBP24.36■■□□□ 1.49
VCP-202ENST00000417448 SCN7AQ01118 1682 aa24.35■■□□□ 1.49
VCP-202ENST00000417448 C21orf2O43822 256 aa24.35■■□□□ 1.49
VCP-202ENST00000417448 LGR6Q9HBX8 967 aa24.35■■□□□ 1.49
VCP-202ENST00000417448 SLX4Q8IY92 1834 aa24.35■■□□□ 1.49
VCP-202ENST00000417448 PASKQ96RG2 1323 aa24.35■■□□□ 1.49
VCP-202ENST00000417448 DDNO94850 711 aaPredicted RBP24.34■■□□□ 1.49
VCP-202ENST00000417448 BICDL1Q6ZP65 573 aa24.34■■□□□ 1.49
VCP-202ENST00000417448 KNSTRNQ9Y448 316 aa24.34■■□□□ 1.49
VCP-202ENST00000417448 ARFGEF2Q9Y6D5 1785 aa24.33■■□□□ 1.49
VCP-202ENST00000417448 SCN4AP35499 1836 aa24.33■■□□□ 1.48
VCP-202ENST00000417448 ZNF622Q969S3 477 aaKnown RBP eCLIP24.32■■□□□ 1.48
VCP-202ENST00000417448 PER1O15534 1290 aaPredicted RBP24.31■■□□□ 1.48
VCP-202ENST00000417448 AKAP4Q5JQC9 854 aa24.31■■□□□ 1.48
VCP-202ENST00000417448 CCDC24Q8N4L8 307 aa24.31■■□□□ 1.48
VCP-202ENST00000417448 LTBP3Q9NS15 1303 aa24.31■■□□□ 1.48
VCP-202ENST00000417448 CTCFP49711 727 aaPredicted RBP24.3■■□□□ 1.48
VCP-202ENST00000417448 VEGFBP49765 207 aa24.3■■□□□ 1.48
VCP-202ENST00000417448 TBC1D9BQ66K14 1250 aa24.3■■□□□ 1.48
VCP-202ENST00000417448 CANXP27824 592 aaKnown RBP24.29■■□□□ 1.48
VCP-202ENST00000417448 TAOK3Q9H2K8 898 aa24.29■■□□□ 1.48
VCP-202ENST00000417448 RNMTO43148 476 aaKnown RBP24.28■■□□□ 1.48
VCP-202ENST00000417448 IL13P35225 146 aa24.28■■□□□ 1.48
VCP-202ENST00000417448 AMER1Q5JTC6 1135 aaPredicted RBP24.28■■□□□ 1.48
VCP-202ENST00000417448 CC2D1BQ5T0F9 858 aaKnown RBP24.28■■□□□ 1.48
VCP-202ENST00000417448 PRR5LQ6MZQ0 368 aa24.28■■□□□ 1.48
VCP-202ENST00000417448 ADAMTSL1Q8N6G6 1762 aa24.28■■□□□ 1.48
VCP-202ENST00000417448 LBX1P52954 281 aa24.27■■□□□ 1.48
VCP-202ENST00000417448 EIF5P55010 431 aaKnown RBP24.27■■□□□ 1.48
VCP-202ENST00000417448 AIDAQ96BJ3 306 aa24.27■■□□□ 1.48
VCP-202ENST00000417448 BRIP1Q9BX63 1249 aa24.27■■□□□ 1.48
VCP-202ENST00000417448 PDE6BP35913 854 aa24.26■■□□□ 1.47
VCP-202ENST00000417448 LDHDQ86WU2 507 aa24.26■■□□□ 1.47
VCP-202ENST00000417448 WBP1LQ9NX94 342 aa24.26■■□□□ 1.47
VCP-202ENST00000417448 ITGBL1O95965 494 aaPredicted RBP24.25■■□□□ 1.47
VCP-202ENST00000417448 MORC1Q86VD1 984 aa24.25■■□□□ 1.47
VCP-202ENST00000417448 VSIG10Q8N0Z9 540 aa24.25■■□□□ 1.47
VCP-202ENST00000417448 FAM161AQ3B820 660 aa24.24■■□□□ 1.47
VCP-202ENST00000417448 TAF1DQ9H5J8 278 aaPredicted RBP24.24■■□□□ 1.47
VCP-202ENST00000417448 PDZRN3Q9UPQ7 1066 aa24.24■■□□□ 1.47
VCP-202ENST00000417448 TMEM88BA6NKF7 163 aa24.23■■□□□ 1.47
VCP-202ENST00000417448 DDX10Q13206 875 aaKnown RBP24.23■■□□□ 1.47
VCP-202ENST00000417448 ABHD8Q96I13 439 aa24.23■■□□□ 1.47
VCP-202ENST00000417448 L3MBTL3Q96JM7 780 aaPredicted RBP24.23■■□□□ 1.47
VCP-202ENST00000417448 IQCA1LA6NCM1 817 aa24.22■■□□□ 1.47
VCP-202ENST00000417448 PRPF40BQ6NWY9 871 aaKnown RBP24.22■■□□□ 1.47
VCP-202ENST00000417448 BCORQ6W2J9 1755 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms