RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 DNAAF4Q8WXU2 420 aa24.05■■□□□ 1.44
RAB3IP-205ENST00000417413 NGLY1Q96IV0 654 aa24.05■■□□□ 1.44
RAB3IP-205ENST00000417413 USP44Q9H0E7 712 aa24.05■■□□□ 1.44
RAB3IP-205ENST00000417413 DDX21Q9NR30 783 aaKnown RBP eCLIP24.05■■□□□ 1.44
RAB3IP-205ENST00000417413 HYPKQ9NX55 129 aa24.05■■□□□ 1.44
RAB3IP-205ENST00000417413 TOGARAM1Q9Y4F4 1720 aa24.04■■□□□ 1.44
RAB3IP-205ENST00000417413 PI4KAP2A4QPH2 592 aa24.04■■□□□ 1.44
RAB3IP-205ENST00000417413 ERVV-2B6SEH9 535 aa24.04■■□□□ 1.44
RAB3IP-205ENST00000417413 NPM2Q86SE8 214 aaKnown RBP24.04■■□□□ 1.44
RAB3IP-205ENST00000417413 PI4KAP1Q8N8J0 262 aa24.04■■□□□ 1.44
RAB3IP-205ENST00000417413 WNK3Q9BYP7 1800 aa24.04■■□□□ 1.44
RAB3IP-205ENST00000417413 BEND3Q5T5X7 828 aa24.03■■□□□ 1.44
RAB3IP-205ENST00000417413 CDCA7Q9BWT1 371 aaPredicted RBP24.03■■□□□ 1.44
RAB3IP-205ENST00000417413 SRCIN1Q9C0H9 1055 aa24.03■■□□□ 1.44
RAB3IP-205ENST00000417413 THRAP3Q9Y2W1 955 aaKnown RBP24.03■■□□□ 1.44
RAB3IP-205ENST00000417413 DISP2A7MBM2 1401 aa24.03■■□□□ 1.44
RAB3IP-205ENST00000417413 TTC5Q8N0Z6 440 aa24.02■■□□□ 1.44
RAB3IP-205ENST00000417413 MEX3CQ5U5Q3 659 aaKnown RBP24.02■■□□□ 1.44
RAB3IP-205ENST00000417413 C8orf37Q96NL8 207 aa24.02■■□□□ 1.44
RAB3IP-205ENST00000417413 IPO9Q96P70 1041 aaKnown RBP24.02■■□□□ 1.44
RAB3IP-205ENST00000417413 FMNL2Q96PY5 1086 aa24.02■■□□□ 1.44
RAB3IP-205ENST00000417413 USP35Q9P2H5 1018 aa24.02■■□□□ 1.44
RAB3IP-205ENST00000417413 SLIT2O94813 1529 aa24.01■■□□□ 1.43
RAB3IP-205ENST00000417413 SNRPA1P09661 255 aaKnown RBP24.01■■□□□ 1.43
RAB3IP-205ENST00000417413 NRAPQ86VF7 1730 aa24.01■■□□□ 1.43
RAB3IP-205ENST00000417413 DDX54Q8TDD1 881 aaKnown RBP24.01■■□□□ 1.43
RAB3IP-205ENST00000417413 HMMRO75330 724 aa24■■□□□ 1.43
RAB3IP-205ENST00000417413 KSR2Q6VAB6 950 aa24■■□□□ 1.43
RAB3IP-205ENST00000417413 UNC5CLQ8IV45 518 aa24■■□□□ 1.43
RAB3IP-205ENST00000417413 SEC24BO95487 1268 aa23.99■■□□□ 1.43
RAB3IP-205ENST00000417413 ATP8B2P98198 1209 aa23.99■■□□□ 1.43
RAB3IP-205ENST00000417413 USP16Q9Y5T5 823 aa23.99■■□□□ 1.43
RAB3IP-205ENST00000417413 KCPQ6ZWJ8 1503 aa23.98■■□□□ 1.43
RAB3IP-205ENST00000417413 UBTFL1P0CB47 393 aaPredicted RBP23.98■■□□□ 1.43
RAB3IP-205ENST00000417413 FNBP4Q8N3X1 1017 aaPredicted RBP23.98■■□□□ 1.43
RAB3IP-205ENST00000417413 MAP3K2Q9Y2U5 619 aa23.98■■□□□ 1.43
RAB3IP-205ENST00000417413 LRRFIP2Q9Y608 721 aaKnown RBP23.98■■□□□ 1.43
RAB3IP-205ENST00000417413 CCDC9Q9Y3X0 531 aaKnown RBP23.97■■□□□ 1.43
RAB3IP-205ENST00000417413 SPATA31A1Q5TZJ5 1347 aa23.96■■□□□ 1.43
RAB3IP-205ENST00000417413 LRP10Q7Z4F1 713 aa23.96■■□□□ 1.43
RAB3IP-205ENST00000417413 ITGB4P16144 1822 aa23.95■■□□□ 1.43
RAB3IP-205ENST00000417413 TNS2Q63HR2 1409 aa23.95■■□□□ 1.43
RAB3IP-205ENST00000417413 SPATA31A5Q5VU36 1347 aa23.95■■□□□ 1.42
RAB3IP-205ENST00000417413 SPATA31A7Q8IWB4 1347 aa23.95■■□□□ 1.42
RAB3IP-205ENST00000417413 ALDH1L1O75891 902 aa23.95■■□□□ 1.42
RAB3IP-205ENST00000417413 PNMA6EA0A0J9YXQ4 647 aa23.94■■□□□ 1.42
RAB3IP-205ENST00000417413 DDX58O95786 925 aaKnown RBP23.94■■□□□ 1.42
RAB3IP-205ENST00000417413 NWD2Q9ULI1 1742 aa23.93■■□□□ 1.42
RAB3IP-205ENST00000417413 VPS72Q15906 364 aa23.93■■□□□ 1.42
RAB3IP-205ENST00000417413 BMP2KLQ5H9B9 411 aa23.93■■□□□ 1.42
RAB3IP-205ENST00000417413 EXOC5O00471 708 aa23.92■■□□□ 1.42
RAB3IP-205ENST00000417413 NBPF7P0C2Y1 421 aaPredicted RBP23.92■■□□□ 1.42
RAB3IP-205ENST00000417413 BARGINQ6ZT62 677 aa23.92■■□□□ 1.42
RAB3IP-205ENST00000417413 PLEKHM2Q8IWE5 1019 aa23.92■■□□□ 1.42
RAB3IP-205ENST00000417413 USP21Q9UK80 565 aa23.92■■□□□ 1.42
RAB3IP-205ENST00000417413 MYL6BP14649 208 aa23.92■■□□□ 1.42
RAB3IP-205ENST00000417413 AIMP1Q12904 312 aaKnown RBP23.92■■□□□ 1.42
RAB3IP-205ENST00000417413 LRP6O75581 1613 aa23.91■■□□□ 1.42
RAB3IP-205ENST00000417413 IBTKQ9P2D0 1353 aaPredicted RBP23.91■■□□□ 1.42
RAB3IP-205ENST00000417413 C16orf71Q8IYS4 520 aaPredicted RBP23.91■■□□□ 1.42
RAB3IP-205ENST00000417413 XAGE3Q8WTP9 111 aa23.91■■□□□ 1.42
RAB3IP-205ENST00000417413 COPS6Q7L5N1 327 aa23.9■■□□□ 1.42
RAB3IP-205ENST00000417413 LINS1Q8NG48 757 aa23.9■■□□□ 1.42
RAB3IP-205ENST00000417413 SSH3Q8TE77 659 aa23.9■■□□□ 1.42
RAB3IP-205ENST00000417413 ARFGEF2Q9Y6D5 1785 aa23.9■■□□□ 1.42
RAB3IP-205ENST00000417413 SMARCA5O60264 1052 aaPredicted RBP23.89■■□□□ 1.42
RAB3IP-205ENST00000417413 ZBTB47Q9UFB7 747 aaPredicted RBP23.89■■□□□ 1.42
RAB3IP-205ENST00000417413 ERBB4Q15303 1308 aa23.89■■□□□ 1.41
RAB3IP-205ENST00000417413 BCL9LQ86UU0 1499 aa23.89■■□□□ 1.41
RAB3IP-205ENST00000417413 POLA2Q14181 598 aa23.88■■□□□ 1.41
RAB3IP-205ENST00000417413 CWF19L2Q2TBE0 894 aaKnown RBP23.88■■□□□ 1.41
RAB3IP-205ENST00000417413 TMOD3Q9NYL9 352 aa23.88■■□□□ 1.41
RAB3IP-205ENST00000417413 UTYO14607 1347 aa23.87■■□□□ 1.41
RAB3IP-205ENST00000417413 APBB1O00213 710 aa23.87■■□□□ 1.41
RAB3IP-205ENST00000417413 PIP4K2AP48426 406 aaPredicted RBP23.87■■□□□ 1.41
RAB3IP-205ENST00000417413 RIC3Q7Z5B4 369 aa23.87■■□□□ 1.41
RAB3IP-205ENST00000417413 EXOC6BQ9Y2D4 811 aa23.87■■□□□ 1.41
RAB3IP-205ENST00000417413 NOP58Q9Y2X3 529 aaKnown RBP23.87■■□□□ 1.41
RAB3IP-205ENST00000417413 IGKV5-2P06315 115 aa23.86■■□□□ 1.41
RAB3IP-205ENST00000417413 DDB1Q16531 1140 aa23.86■■□□□ 1.41
RAB3IP-205ENST00000417413 PPP1R42Q7Z4L9 355 aa23.86■■□□□ 1.41
RAB3IP-205ENST00000417413 OTUD7AQ8TE49 926 aaPredicted RBP23.86■■□□□ 1.41
RAB3IP-205ENST00000417413 DDRGK1Q96HY6 314 aa23.86■■□□□ 1.41
RAB3IP-205ENST00000417413 NBPF26B4DH59 902 aa23.85■■□□□ 1.41
RAB3IP-205ENST00000417413 NBPF14Q5TI25 921 aa23.85■■□□□ 1.41
RAB3IP-205ENST00000417413 NBPF10Q6P3W6 841 aaKnown RBP23.85■■□□□ 1.41
RAB3IP-205ENST00000417413 ANKRD13DQ6ZTN6 518 aa23.85■■□□□ 1.41
RAB3IP-205ENST00000417413 NBPF15Q8N660 670 aa23.85■■□□□ 1.41
RAB3IP-205ENST00000417413 METTL22Q9BUU2 404 aaPredicted RBP23.85■■□□□ 1.41
RAB3IP-205ENST00000417413 AFDNP55196 1824 aaKnown RBP23.85■■□□□ 1.41
RAB3IP-205ENST00000417413 PIGBQ92521 554 aa23.84■■□□□ 1.41
RAB3IP-205ENST00000417413 C9orf78Q9NZ63 289 aaPredicted RBP23.84■■□□□ 1.41
RAB3IP-205ENST00000417413 NUP188Q5SRE5 1749 aa23.84■■□□□ 1.41
RAB3IP-205ENST00000417413 PTCD1O75127 700 aaKnown RBP23.84■■□□□ 1.41
RAB3IP-205ENST00000417413 GSPT1P15170 499 aaKnown RBP23.84■■□□□ 1.41
RAB3IP-205ENST00000417413 MTX1Q13505 466 aa23.84■■□□□ 1.41
RAB3IP-205ENST00000417413 TTC22Q5TAA0 569 aa23.84■■□□□ 1.41
RAB3IP-205ENST00000417413 AFF2P51816 1311 aa23.84■■□□□ 1.41
RAB3IP-205ENST00000417413 FBXO41Q8TF61 875 aa23.83■■□□□ 1.41
RAB3IP-205ENST00000417413 TRPC5Q9UL62 973 aaPredicted RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms