RNA–Protein interactions for RNA: ENST00000417105.5

COL9A2-203, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-203ENST00000417105 DDR1Q08345 913 aa29.43■■■□□ 2.3
COL9A2-203ENST00000417105 HEG1Q9ULI3 1381 aa29.42■■■□□ 2.3
COL9A2-203ENST00000417105 STARD3NLO95772 234 aa29.42■■■□□ 2.3
COL9A2-203ENST00000417105 BTBD11A6QL63 1104 aa29.41■■■□□ 2.3
COL9A2-203ENST00000417105 KCNQ3O43525 872 aa29.41■■■□□ 2.3
COL9A2-203ENST00000417105 MCM10Q7L590 875 aa29.41■■■□□ 2.3
COL9A2-203ENST00000417105 RTF1Q92541 710 aaKnown RBP29.41■■■□□ 2.3
COL9A2-203ENST00000417105 KIAA1551Q9HCM1 1747 aa29.41■■■□□ 2.3
COL9A2-203ENST00000417105 N4BP2Q86UW6 1770 aaPredicted RBP29.4■■■□□ 2.3
COL9A2-203ENST00000417105 FMNL2Q96PY5 1086 aa29.4■■■□□ 2.3
COL9A2-203ENST00000417105 NARFQ9UHQ1 456 aa29.4■■■□□ 2.3
COL9A2-203ENST00000417105 DPEP1P16444 411 aa29.39■■■□□ 2.3
COL9A2-203ENST00000417105 POLRMTO00411 1230 aaKnown RBP29.38■■■□□ 2.29
COL9A2-203ENST00000417105 TM4SF1P30408 202 aa29.38■■■□□ 2.29
COL9A2-203ENST00000417105 DCTN1Q14203 1278 aa29.38■■■□□ 2.29
COL9A2-203ENST00000417105 TEX13AQ9BXU3 409 aaPredicted RBP29.37■■■□□ 2.29
COL9A2-203ENST00000417105 EIF5P55010 431 aaKnown RBP29.36■■■□□ 2.29
COL9A2-203ENST00000417105 BCS1LQ9Y276 419 aa29.36■■■□□ 2.29
COL9A2-203ENST00000417105 BCL2L12Q9HB09 334 aa29.35■■■□□ 2.29
COL9A2-203ENST00000417105 DDX10Q13206 875 aaKnown RBP29.34■■■□□ 2.29
COL9A2-203ENST00000417105 NFIXQ14938 502 aa29.34■■■□□ 2.29
COL9A2-203ENST00000417105 ZNF330Q9Y3S2 320 aaPredicted RBP29.34■■■□□ 2.29
COL9A2-203ENST00000417105 HTATSF1O43719 755 aaKnown RBP29.33■■■□□ 2.29
COL9A2-203ENST00000417105 A1BGP04217 495 aa29.32■■■□□ 2.28
COL9A2-203ENST00000417105 NEFMP07197 916 aa29.32■■■□□ 2.28
COL9A2-203ENST00000417105 KCNA3P22001 575 aa29.32■■■□□ 2.28
COL9A2-203ENST00000417105 ATP10DQ9P241 1426 aa29.31■■■□□ 2.28
COL9A2-203ENST00000417105 A0A087WZG4 1122 aa29.31■■■□□ 2.28
COL9A2-203ENST00000417105 PLEKHF1Q96S99 279 aa29.3■■■□□ 2.28
COL9A2-203ENST00000417105 RALBP1Q15311 655 aa29.29■■■□□ 2.28
COL9A2-203ENST00000417105 PRAMEF22A3QJZ6 481 aa29.28■■■□□ 2.28
COL9A2-203ENST00000417105 CHRNA5P30532 468 aa29.28■■■□□ 2.28
COL9A2-203ENST00000417105 IL6STP40189 918 aaPredicted RBP29.28■■■□□ 2.28
COL9A2-203ENST00000417105 BICDL1Q6ZP65 573 aa29.28■■■□□ 2.28
COL9A2-203ENST00000417105 TBC1D2BQ9UPU7 963 aa29.28■■■□□ 2.28
COL9A2-203ENST00000417105 USP16Q9Y5T5 823 aa29.28■■■□□ 2.28
COL9A2-203ENST00000417105 GIGYF1O75420 1035 aaPredicted RBP29.27■■■□□ 2.28
COL9A2-203ENST00000417105 PIM2Q9P1W9 311 aa29.27■■■□□ 2.28
COL9A2-203ENST00000417105 ADCY9O60503 1353 aa29.26■■■□□ 2.28
COL9A2-203ENST00000417105 SERPINB2P05120 415 aa29.26■■■□□ 2.27
COL9A2-203ENST00000417105 TAF7Q15545 349 aaPredicted RBP29.26■■■□□ 2.27
COL9A2-203ENST00000417105 MIS18AQ9NYP9 233 aa29.26■■■□□ 2.27
COL9A2-203ENST00000417105 SNRPA1P09661 255 aaKnown RBP29.25■■■□□ 2.27
COL9A2-203ENST00000417105 PIP4K2AP48426 406 aaPredicted RBP29.25■■■□□ 2.27
COL9A2-203ENST00000417105 ARHGAP27Q6ZUM4 889 aa29.25■■■□□ 2.27
COL9A2-203ENST00000417105 NPM2Q86SE8 214 aaKnown RBP29.25■■■□□ 2.27
COL9A2-203ENST00000417105 BRCA1P38398 1863 aaKnown RBP29.25■■■□□ 2.27
COL9A2-203ENST00000417105 C1QTNF8P60827 252 aa29.24■■■□□ 2.27
COL9A2-203ENST00000417105 NFE2L2Q16236 605 aa29.24■■■□□ 2.27
COL9A2-203ENST00000417105 ZNF526Q8TF50 670 aaPredicted RBP29.24■■■□□ 2.27
COL9A2-203ENST00000417105 AFDNP55196 1824 aaKnown RBP29.24■■■□□ 2.27
COL9A2-203ENST00000417105 MAPK8IP3Q9UPT6 1336 aa29.23■■■□□ 2.27
COL9A2-203ENST00000417105 DALRD3Q5D0E6 543 aaKnown RBP29.23■■■□□ 2.27
COL9A2-203ENST00000417105 TBC1D9BQ66K14 1250 aa29.23■■■□□ 2.27
COL9A2-203ENST00000417105 PNNQ9H307 717 aaKnown RBP29.23■■■□□ 2.27
COL9A2-203ENST00000417105 NRXN2Q9P2S2 1712 aa29.22■■■□□ 2.27
COL9A2-203ENST00000417105 DLG5Q8TDM6 1919 aa29.22■■■□□ 2.27
COL9A2-203ENST00000417105 THUMPD2Q9BTF0 503 aaKnown RBP29.21■■■□□ 2.27
COL9A2-203ENST00000417105 SCN7AQ01118 1682 aa29.21■■■□□ 2.27
COL9A2-203ENST00000417105 GPBP1L1Q9HC44 474 aaPredicted RBP29.2■■■□□ 2.26
COL9A2-203ENST00000417105 CAMTA2O94983 1202 aa29.19■■■□□ 2.26
COL9A2-203ENST00000417105 DZIP3Q86Y13 1208 aaKnown RBP29.19■■■□□ 2.26
COL9A2-203ENST00000417105 CARMIL3Q8ND23 1372 aa29.18■■■□□ 2.26
COL9A2-203ENST00000417105 MYBBP1AQ9BQG0 1328 aaKnown RBP29.18■■■□□ 2.26
COL9A2-203ENST00000417105 ARFGEF1Q9Y6D6 1849 aa29.16■■■□□ 2.26
COL9A2-203ENST00000417105 PNISRQ8TF01 805 aaKnown RBP29.16■■■□□ 2.26
COL9A2-203ENST00000417105 NBPF26B4DH59 902 aa29.14■■■□□ 2.26
COL9A2-203ENST00000417105 NBPF10Q6P3W6 841 aaKnown RBP29.14■■■□□ 2.26
COL9A2-203ENST00000417105 C2CD5Q86YS7 1000 aa29.14■■■□□ 2.26
COL9A2-203ENST00000417105 CCDC24Q8N4L8 307 aa29.14■■■□□ 2.26
COL9A2-203ENST00000417105 NBPF15Q8N660 670 aa29.14■■■□□ 2.26
COL9A2-203ENST00000417105 SETDB2Q96T68 719 aa29.13■■■□□ 2.25
COL9A2-203ENST00000417105 PRR5LQ6MZQ0 368 aa29.12■■■□□ 2.25
COL9A2-203ENST00000417105 KDM3BQ7LBC6 1761 aa29.11■■■□□ 2.25
COL9A2-203ENST00000417105 RIPK4P57078 832 aa29.11■■■□□ 2.25
COL9A2-203ENST00000417105 EIF4A1P60842 406 aaKnown RBP29.11■■■□□ 2.25
COL9A2-203ENST00000417105 BCORQ6W2J9 1755 aa29.11■■■□□ 2.25
COL9A2-203ENST00000417105 SENP3-EIF4A1A0A087X0R7 540 aa29.1■■■□□ 2.25
COL9A2-203ENST00000417105 H0YIN7 160 aa29.1■■■□□ 2.25
COL9A2-203ENST00000417105 C9orf131Q5VYM1 1079 aa29.1■■■□□ 2.25
COL9A2-203ENST00000417105 NPHP1O15259 732 aa29.08■■■□□ 2.25
COL9A2-203ENST00000417105 CCDC146Q8IYE0 955 aa29.08■■■□□ 2.25
COL9A2-203ENST00000417105 TTLL6Q8N841 843 aa29.08■■■□□ 2.25
COL9A2-203ENST00000417105 CNBD1Q8NA66 436 aa29.08■■■□□ 2.25
COL9A2-203ENST00000417105 BRIP1Q9BX63 1249 aa29.08■■■□□ 2.25
COL9A2-203ENST00000417105 TMPOP42166 694 aaKnown RBP29.07■■■□□ 2.24
COL9A2-203ENST00000417105 CLEC4GQ6UXB4 293 aa29.07■■■□□ 2.24
COL9A2-203ENST00000417105 ZNF652Q9Y2D9 606 aa29.07■■■□□ 2.24
COL9A2-203ENST00000417105 LAMB4A4D0S4 1761 aa29.06■■■□□ 2.24
COL9A2-203ENST00000417105 DLEC1Q9Y238 1755 aa29.06■■■□□ 2.24
COL9A2-203ENST00000417105 PDE6BP35913 854 aa29.06■■■□□ 2.24
COL9A2-203ENST00000417105 RRP7AQ9Y3A4 280 aaKnown RBP29.06■■■□□ 2.24
COL9A2-203ENST00000417105 ANKRD31Q8N7Z5 1873 aa29.06■■■□□ 2.24
COL9A2-203ENST00000417105 NGEFQ8N5V2 710 aa29.05■■■□□ 2.24
COL9A2-203ENST00000417105 ZNF622Q969S3 477 aaKnown RBP eCLIP29.05■■■□□ 2.24
COL9A2-203ENST00000417105 RNF181Q9P0P0 153 aa29.05■■■□□ 2.24
COL9A2-203ENST00000417105 TSPYL4Q9UJ04 414 aa29.05■■■□□ 2.24
COL9A2-203ENST00000417105 ST5P78524 1137 aa29.04■■■□□ 2.24
COL9A2-203ENST00000417105 WDR43Q15061 677 aaKnown RBP eCLIP29.04■■■□□ 2.24
COL9A2-203ENST00000417105 RASSF7Q02833 373 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms