RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 TEFQ10587 303 aa19.41■□□□□ 0.7
PAF1-202ENST00000416728 DALRD3Q5D0E6 543 aaKnown RBP19.41■□□□□ 0.7
PAF1-202ENST00000416728 GNAT3A8MTJ3 354 aa19.4■□□□□ 0.7
PAF1-202ENST00000416728 KIF3CO14782 793 aa19.39■□□□□ 0.69
PAF1-202ENST00000416728 STARD3NLO95772 234 aa19.39■□□□□ 0.69
PAF1-202ENST00000416728 CANXP27824 592 aaKnown RBP19.39■□□□□ 0.69
PAF1-202ENST00000416728 CHRNA5P30532 468 aa19.39■□□□□ 0.69
PAF1-202ENST00000416728 NFIXQ14938 502 aa19.39■□□□□ 0.69
PAF1-202ENST00000416728 IL17REQ8NFR9 667 aa19.39■□□□□ 0.69
PAF1-202ENST00000416728 CFAP53Q96M91 514 aa19.39■□□□□ 0.69
PAF1-202ENST00000416728 HSPA6P17066 643 aa19.38■□□□□ 0.69
PAF1-202ENST00000416728 ZNF790Q6PG37 636 aa19.37■□□□□ 0.69
PAF1-202ENST00000416728 ZNF496Q96IT1 587 aaPredicted RBP19.37■□□□□ 0.69
PAF1-202ENST00000416728 C9orf131Q5VYM1 1079 aa19.36■□□□□ 0.69
PAF1-202ENST00000416728 BCL2L12Q9HB09 334 aa19.36■□□□□ 0.69
PAF1-202ENST00000416728 PRKAR2BP31323 418 aa19.35■□□□□ 0.69
PAF1-202ENST00000416728 TEX13AQ9BXU3 409 aaPredicted RBP19.35■□□□□ 0.69
PAF1-202ENST00000416728 BRCA1P38398 1863 aaKnown RBP19.35■□□□□ 0.69
PAF1-202ENST00000416728 HEG1Q9ULI3 1381 aa19.35■□□□□ 0.69
PAF1-202ENST00000416728 A0A087WZG4 1122 aa19.34■□□□□ 0.69
PAF1-202ENST00000416728 SERPINB2P05120 415 aa19.34■□□□□ 0.69
PAF1-202ENST00000416728 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
PAF1-202ENST00000416728 NUDCQ9Y266 331 aa19.34■□□□□ 0.69
PAF1-202ENST00000416728 UBR2Q8IWV8 1755 aa19.34■□□□□ 0.69
PAF1-202ENST00000416728 PHACTR3Q96KR7 559 aa19.33■□□□□ 0.69
PAF1-202ENST00000416728 FMNL2Q96PY5 1086 aa19.33■□□□□ 0.69
PAF1-202ENST00000416728 RSPH6AQ9H0K4 717 aa19.33■□□□□ 0.69
PAF1-202ENST00000416728 VIRMAQ69YN4 1812 aaKnown RBP19.33■□□□□ 0.69
PAF1-202ENST00000416728 CEMIPQ8WUJ3 1361 aa19.33■□□□□ 0.68
PAF1-202ENST00000416728 NMRK2Q9NPI5 230 aa19.32■□□□□ 0.68
PAF1-202ENST00000416728 RNF181Q9P0P0 153 aa19.32■□□□□ 0.68
PAF1-202ENST00000416728 ZNF330Q9Y3S2 320 aaPredicted RBP19.32■□□□□ 0.68
PAF1-202ENST00000416728 TOMM70O94826 608 aa19.32■□□□□ 0.68
PAF1-202ENST00000416728 BICDL1Q6ZP65 573 aa19.32■□□□□ 0.68
PAF1-202ENST00000416728 ARFGEF1Q9Y6D6 1849 aa19.31■□□□□ 0.68
PAF1-202ENST00000416728 BTBD11A6QL63 1104 aa19.31■□□□□ 0.68
PAF1-202ENST00000416728 U2AF1L5P0DN76 240 aaPredicted RBP19.31■□□□□ 0.68
PAF1-202ENST00000416728 PPP2R1AP30153 589 aa19.31■□□□□ 0.68
PAF1-202ENST00000416728 U2AF1Q01081 240 aaKnown RBP eCLIP19.31■□□□□ 0.68
PAF1-202ENST00000416728 NPM2Q86SE8 214 aaKnown RBP19.31■□□□□ 0.68
PAF1-202ENST00000416728 IL6STP40189 918 aaPredicted RBP19.3■□□□□ 0.68
PAF1-202ENST00000416728 C2CD5Q86YS7 1000 aa19.29■□□□□ 0.68
PAF1-202ENST00000416728 RTF1Q92541 710 aaKnown RBP19.29■□□□□ 0.68
PAF1-202ENST00000416728 TBC1D2BQ9UPU7 963 aa19.29■□□□□ 0.68
PAF1-202ENST00000416728 CEP350Q5VT06 3117 aa19.28■□□□□ 0.68
PAF1-202ENST00000416728 KDM2BQ8NHM5 1336 aa19.28■□□□□ 0.68
PAF1-202ENST00000416728 NRXN2Q9P2S2 1712 aa19.28■□□□□ 0.68
PAF1-202ENST00000416728 H0YIN7 160 aa19.28■□□□□ 0.68
PAF1-202ENST00000416728 A1BGP04217 495 aa19.28■□□□□ 0.68
PAF1-202ENST00000416728 TBC1D9BQ66K14 1250 aa19.28■□□□□ 0.68
PAF1-202ENST00000416728 TTLL6Q8N841 843 aa19.28■□□□□ 0.68
PAF1-202ENST00000416728 CARMIL3Q8ND23 1372 aa19.28■□□□□ 0.68
PAF1-202ENST00000416728 KCNQ3O43525 872 aa19.27■□□□□ 0.68
PAF1-202ENST00000416728 C16orf71Q8IYS4 520 aaPredicted RBP19.27■□□□□ 0.68
PAF1-202ENST00000416728 AFDNP55196 1824 aaKnown RBP19.26■□□□□ 0.67
PAF1-202ENST00000416728 RASSF7Q02833 373 aa19.26■□□□□ 0.67
PAF1-202ENST00000416728 SIPA1L3O60292 1781 aaPredicted RBP19.26■□□□□ 0.67
PAF1-202ENST00000416728 APLP1P51693 650 aa19.25■□□□□ 0.67
PAF1-202ENST00000416728 MCM10Q7L590 875 aa19.25■□□□□ 0.67
PAF1-202ENST00000416728 RBM46Q8TBY0 533 aaKnown RBP19.24■□□□□ 0.67
PAF1-202ENST00000416728 PDZRN3Q9UPQ7 1066 aa19.24■□□□□ 0.67
PAF1-202ENST00000416728 ZC3H4Q9UPT8 1303 aaKnown RBP19.24■□□□□ 0.67
PAF1-202ENST00000416728 CAMTA2O94983 1202 aa19.23■□□□□ 0.67
PAF1-202ENST00000416728 LMNB1P20700 586 aa19.23■□□□□ 0.67
PAF1-202ENST00000416728 PDE6BP35913 854 aa19.23■□□□□ 0.67
PAF1-202ENST00000416728 PRR5LQ6MZQ0 368 aa19.23■□□□□ 0.67
PAF1-202ENST00000416728 DZIP3Q86Y13 1208 aaKnown RBP19.23■□□□□ 0.67
PAF1-202ENST00000416728 SETDB2Q96T68 719 aa19.23■□□□□ 0.67
PAF1-202ENST00000416728 BRIP1Q9BX63 1249 aa19.23■□□□□ 0.67
PAF1-202ENST00000416728 USP16Q9Y5T5 823 aa19.23■□□□□ 0.67
PAF1-202ENST00000416728 SCN7AQ01118 1682 aa19.23■□□□□ 0.67
PAF1-202ENST00000416728 NPHP1O15259 732 aa19.22■□□□□ 0.67
PAF1-202ENST00000416728 SNRPA1P09661 255 aaKnown RBP19.22■□□□□ 0.67
PAF1-202ENST00000416728 ZNF622Q969S3 477 aaKnown RBP eCLIP19.22■□□□□ 0.671e-6■■■■□ 21.1
PAF1-202ENST00000416728 HTATSF1O43719 755 aaKnown RBP19.21■□□□□ 0.67
PAF1-202ENST00000416728 DCTN1Q14203 1278 aa19.21■□□□□ 0.67
PAF1-202ENST00000416728 CCDC24Q8N4L8 307 aa19.21■□□□□ 0.67
PAF1-202ENST00000416728 CNBD1Q8NA66 436 aa19.21■□□□□ 0.67
PAF1-202ENST00000416728 RRAGCQ9HB90 399 aa19.21■□□□□ 0.67
PAF1-202ENST00000416728 PRAMEF22A3QJZ6 481 aa19.2■□□□□ 0.66
PAF1-202ENST00000416728 PIP4K2AP48426 406 aaPredicted RBP19.2■□□□□ 0.66
PAF1-202ENST00000416728 DLEC1Q9Y238 1755 aa19.2■□□□□ 0.66
PAF1-202ENST00000416728 NFKBIEO00221 500 aa19.19■□□□□ 0.66
PAF1-202ENST00000416728 NEFMP07197 916 aa19.19■□□□□ 0.66
PAF1-202ENST00000416728 ST5P78524 1137 aa19.19■□□□□ 0.66
PAF1-202ENST00000416728 FSTL1Q12841 308 aa19.19■□□□□ 0.66
PAF1-202ENST00000416728 PRELPP51888 382 aa19.19■□□□□ 0.66
PAF1-202ENST00000416728 ZNF652Q9Y2D9 606 aa19.19■□□□□ 0.66
PAF1-202ENST00000416728 CLEC4GQ6UXB4 293 aa19.18■□□□□ 0.66
PAF1-202ENST00000416728 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
PAF1-202ENST00000416728 GLTPD2A6NH11 291 aa19.17■□□□□ 0.66
PAF1-202ENST00000416728 C21orf2O43822 256 aa19.17■□□□□ 0.66
PAF1-202ENST00000416728 TAF7Q15545 349 aaPredicted RBP19.17■□□□□ 0.66
PAF1-202ENST00000416728 SBF1O95248 1867 aa19.16■□□□□ 0.66
PAF1-202ENST00000416728 NBPF5PQ86XG9 351 aaPredicted RBP19.16■□□□□ 0.66
PAF1-202ENST00000416728 CNKSR1Q969H4 720 aa19.16■□□□□ 0.66
PAF1-202ENST00000416728 TNRC6CQ9HCJ0 1690 aaKnown RBP19.15■□□□□ 0.66
PAF1-202ENST00000416728 STYK1Q6J9G0 422 aa19.15■□□□□ 0.66
PAF1-202ENST00000416728 ANKRD31Q8N7Z5 1873 aa19.14■□□□□ 0.66
PAF1-202ENST00000416728 NBPF26B4DH59 902 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms