RNA–Protein interactions for RNA: ENST00000416636.2

CLK2P1-201, Transcript of CDC like kinase 2, pseudogene 1, humanhuman

BASIC

Gene CLK2P1, Length 1,294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P1-201ENST00000416636 DDR1Q08345 913 aa16.66■□□□□ 0.26
CLK2P1-201ENST00000416636 ZNF790Q6PG37 636 aa16.66■□□□□ 0.26
CLK2P1-201ENST00000416636 TTC5Q8N0Z6 440 aa16.66■□□□□ 0.26
CLK2P1-201ENST00000416636 ZNF496Q96IT1 587 aaPredicted RBP16.66■□□□□ 0.26
CLK2P1-201ENST00000416636 NRXN2Q9P2S2 1712 aa16.66■□□□□ 0.26
CLK2P1-201ENST00000416636 HEG1Q9ULI3 1381 aa16.65■□□□□ 0.26
CLK2P1-201ENST00000416636 FCHSD2O94868 740 aa16.65■□□□□ 0.26
CLK2P1-201ENST00000416636 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
CLK2P1-201ENST00000416636 NARFQ9UHQ1 456 aa16.65■□□□□ 0.26
CLK2P1-201ENST00000416636 ADCY9O60503 1353 aa16.64■□□□□ 0.26
CLK2P1-201ENST00000416636 ZPR1O75312 459 aa16.64■□□□□ 0.25
CLK2P1-201ENST00000416636 DPEP1P16444 411 aa16.64■□□□□ 0.25
CLK2P1-201ENST00000416636 ATP10DQ9P241 1426 aa16.63■□□□□ 0.25
CLK2P1-201ENST00000416636 POLRMTO00411 1230 aaKnown RBP16.63■□□□□ 0.25
CLK2P1-201ENST00000416636 KCNA3P22001 575 aa16.63■□□□□ 0.25
CLK2P1-201ENST00000416636 KCNQ3O43525 872 aa16.62■□□□□ 0.25
CLK2P1-201ENST00000416636 STARD3NLO95772 234 aa16.62■□□□□ 0.25
CLK2P1-201ENST00000416636 CANXP27824 592 aaKnown RBP16.62■□□□□ 0.25
CLK2P1-201ENST00000416636 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
CLK2P1-201ENST00000416636 BCL2L12Q9HB09 334 aa16.62■□□□□ 0.25
CLK2P1-201ENST00000416636 BCS1LQ9Y276 419 aa16.62■□□□□ 0.25
CLK2P1-201ENST00000416636 C1QTNF8P60827 252 aa16.61■□□□□ 0.25
CLK2P1-201ENST00000416636 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
CLK2P1-201ENST00000416636 SCN7AQ01118 1682 aa16.61■□□□□ 0.25
CLK2P1-201ENST00000416636 DLEC1Q9Y238 1755 aa16.6■□□□□ 0.25
CLK2P1-201ENST00000416636 BTBD11A6QL63 1104 aa16.6■□□□□ 0.25
CLK2P1-201ENST00000416636 GIGYF1O75420 1035 aaPredicted RBP16.6■□□□□ 0.25
CLK2P1-201ENST00000416636 NFIXQ14938 502 aa16.6■□□□□ 0.25
CLK2P1-201ENST00000416636 MCM10Q7L590 875 aa16.6■□□□□ 0.25
CLK2P1-201ENST00000416636 FMNL2Q96PY5 1086 aa16.6■□□□□ 0.25
CLK2P1-201ENST00000416636 SBF1O95248 1867 aa16.59■□□□□ 0.25
CLK2P1-201ENST00000416636 HTATSF1O43719 755 aaKnown RBP16.58■□□□□ 0.24
CLK2P1-201ENST00000416636 DCTN1Q14203 1278 aa16.58■□□□□ 0.24
CLK2P1-201ENST00000416636 RTF1Q92541 710 aaKnown RBP16.58■□□□□ 0.24
CLK2P1-201ENST00000416636 BCORQ6W2J9 1755 aa16.58■□□□□ 0.24
CLK2P1-201ENST00000416636 ANKRD31Q8N7Z5 1873 aa16.57■□□□□ 0.24
CLK2P1-201ENST00000416636 A0A087WZG4 1122 aa16.57■□□□□ 0.24
CLK2P1-201ENST00000416636 A1BGP04217 495 aa16.57■□□□□ 0.24
CLK2P1-201ENST00000416636 CHRNA5P30532 468 aa16.57■□□□□ 0.24
CLK2P1-201ENST00000416636 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
CLK2P1-201ENST00000416636 PIM2Q9P1W9 311 aa16.57■□□□□ 0.24
CLK2P1-201ENST00000416636 SERPINB2P05120 415 aa16.56■□□□□ 0.24
CLK2P1-201ENST00000416636 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
CLK2P1-201ENST00000416636 USP16Q9Y5T5 823 aa16.56■□□□□ 0.24
CLK2P1-201ENST00000416636 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
CLK2P1-201ENST00000416636 PRAMEF22A3QJZ6 481 aa16.55■□□□□ 0.24
CLK2P1-201ENST00000416636 ARHGAP27Q6ZUM4 889 aa16.55■□□□□ 0.24
CLK2P1-201ENST00000416636 GPBP1L1Q9HC44 474 aaPredicted RBP16.55■□□□□ 0.24
CLK2P1-201ENST00000416636 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
CLK2P1-201ENST00000416636 LAMB4A4D0S4 1761 aa16.54■□□□□ 0.24
CLK2P1-201ENST00000416636 DALRD3Q5D0E6 543 aaKnown RBP16.54■□□□□ 0.24
CLK2P1-201ENST00000416636 ZNF526Q8TF50 670 aaPredicted RBP16.54■□□□□ 0.24
CLK2P1-201ENST00000416636 CCDC88AQ3V6T2 1871 aa16.53■□□□□ 0.24
CLK2P1-201ENST00000416636 TBC1D9BQ66K14 1250 aa16.53■□□□□ 0.24
CLK2P1-201ENST00000416636 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
CLK2P1-201ENST00000416636 CEP350Q5VT06 3117 aa16.52■□□□□ 0.24
CLK2P1-201ENST00000416636 CARMIL3Q8ND23 1372 aa16.52■□□□□ 0.24
CLK2P1-201ENST00000416636 SNRPA1P09661 255 aaKnown RBP16.52■□□□□ 0.24
CLK2P1-201ENST00000416636 TAF7Q15545 349 aaPredicted RBP16.52■□□□□ 0.24
CLK2P1-201ENST00000416636 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.24
CLK2P1-201ENST00000416636 SENP3-EIF4A1A0A087X0R7 540 aa16.51■□□□□ 0.23
CLK2P1-201ENST00000416636 CAMTA2O94983 1202 aa16.51■□□□□ 0.23
CLK2P1-201ENST00000416636 NEFMP07197 916 aa16.51■□□□□ 0.23
CLK2P1-201ENST00000416636 PIP4K2AP48426 406 aaPredicted RBP16.51■□□□□ 0.23
CLK2P1-201ENST00000416636 RALBP1Q15311 655 aa16.51■□□□□ 0.23
CLK2P1-201ENST00000416636 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
CLK2P1-201ENST00000416636 DDX10Q13206 875 aaKnown RBP16.5■□□□□ 0.23
CLK2P1-201ENST00000416636 NFE2L2Q16236 605 aa16.5■□□□□ 0.23
CLK2P1-201ENST00000416636 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
CLK2P1-201ENST00000416636 NPM2Q86SE8 214 aaKnown RBP16.49■□□□□ 0.23
CLK2P1-201ENST00000416636 DZIP3Q86Y13 1208 aaKnown RBP16.49■□□□□ 0.23
CLK2P1-201ENST00000416636 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
CLK2P1-201ENST00000416636 NBPF26B4DH59 902 aa16.48■□□□□ 0.23
CLK2P1-201ENST00000416636 KIF3CO14782 793 aa16.48■□□□□ 0.23
CLK2P1-201ENST00000416636 C9orf131Q5VYM1 1079 aa16.48■□□□□ 0.23
CLK2P1-201ENST00000416636 PRR5LQ6MZQ0 368 aa16.48■□□□□ 0.23
CLK2P1-201ENST00000416636 NBPF10Q6P3W6 841 aaKnown RBP16.48■□□□□ 0.23
CLK2P1-201ENST00000416636 NBPF15Q8N660 670 aa16.48■□□□□ 0.23
CLK2P1-201ENST00000416636 PNNQ9H307 717 aaKnown RBP16.48■□□□□ 0.23
CLK2P1-201ENST00000416636 NUP98P52948 1817 aa16.47■□□□□ 0.23
CLK2P1-201ENST00000416636 H0YIN7 160 aa16.47■□□□□ 0.23
CLK2P1-201ENST00000416636 C2CD5Q86YS7 1000 aa16.47■□□□□ 0.23
CLK2P1-201ENST00000416636 SETDB2Q96T68 719 aa16.47■□□□□ 0.23
CLK2P1-201ENST00000416636 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
CLK2P1-201ENST00000416636 MAPK8IP3Q9UPT6 1336 aa16.46■□□□□ 0.23
CLK2P1-201ENST00000416636 CLEC4GQ6UXB4 293 aa16.46■□□□□ 0.23
CLK2P1-201ENST00000416636 CCDC24Q8N4L8 307 aa16.46■□□□□ 0.23
CLK2P1-201ENST00000416636 TTLL6Q8N841 843 aa16.46■□□□□ 0.23
CLK2P1-201ENST00000416636 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.23
CLK2P1-201ENST00000416636 BRIP1Q9BX63 1249 aa16.46■□□□□ 0.23
CLK2P1-201ENST00000416636 ARFGEF2Q9Y6D5 1785 aa16.46■□□□□ 0.22
CLK2P1-201ENST00000416636 FER1L6Q2WGJ9 1857 aa16.46■□□□□ 0.22
CLK2P1-201ENST00000416636 EIF4A1P60842 406 aaKnown RBP16.45■□□□□ 0.22
CLK2P1-201ENST00000416636 DICER1Q9UPY3 1922 aaKnown RBP16.45■□□□□ 0.22
CLK2P1-201ENST00000416636 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
CLK2P1-201ENST00000416636 MYBBP1AQ9BQG0 1328 aaKnown RBP16.45■□□□□ 0.22
CLK2P1-201ENST00000416636 PDE6BP35913 854 aa16.44■□□□□ 0.22
CLK2P1-201ENST00000416636 RNF181Q9P0P0 153 aa16.44■□□□□ 0.22
CLK2P1-201ENST00000416636 PDZRN3Q9UPQ7 1066 aa16.44■□□□□ 0.22
CLK2P1-201ENST00000416636 RGL2O15211 777 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms