RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 NARFQ9UHQ1 456 aa17.97■□□□□ 0.47
LINC01398-201ENST00000416581 COL3A1P02461 1466 aaPredicted RBP17.96■□□□□ 0.47
LINC01398-201ENST00000416581 A0A087WZG4 1122 aa17.96■□□□□ 0.47
LINC01398-201ENST00000416581 LGR6Q9HBX8 967 aa17.96■□□□□ 0.47
LINC01398-201ENST00000416581 NRXN2Q9P2S2 1712 aa17.95■□□□□ 0.46
LINC01398-201ENST00000416581 POLRMTO00411 1230 aaKnown RBP17.95■□□□□ 0.46
LINC01398-201ENST00000416581 TM4SF1P30408 202 aa17.95■□□□□ 0.46
LINC01398-201ENST00000416581 DDR1Q08345 913 aa17.95■□□□□ 0.46
LINC01398-201ENST00000416581 ZC3H4Q9UPT8 1303 aaKnown RBP17.95■□□□□ 0.46
LINC01398-201ENST00000416581 GNAT3A8MTJ3 354 aa17.94■□□□□ 0.46
LINC01398-201ENST00000416581 KIF3CO14782 793 aa17.94■□□□□ 0.46
LINC01398-201ENST00000416581 U2SURPO15042 1029 aaKnown RBP17.94■□□□□ 0.46
LINC01398-201ENST00000416581 TOMM70O94826 608 aa17.94■□□□□ 0.46
LINC01398-201ENST00000416581 USPL1Q5W0Q7 1092 aa17.94■□□□□ 0.46
LINC01398-201ENST00000416581 NPM2Q86SE8 214 aaKnown RBP17.94■□□□□ 0.46
LINC01398-201ENST00000416581 PDZRN3Q9UPQ7 1066 aa17.94■□□□□ 0.46
LINC01398-201ENST00000416581 KDM2BQ8NHM5 1336 aa17.94■□□□□ 0.46
LINC01398-201ENST00000416581 DLEC1Q9Y238 1755 aa17.94■□□□□ 0.46
LINC01398-201ENST00000416581 NUDCQ9Y266 331 aa17.93■□□□□ 0.46
LINC01398-201ENST00000416581 SIPA1L3O60292 1781 aaPredicted RBP17.92■□□□□ 0.46
LINC01398-201ENST00000416581 KCNA3P22001 575 aa17.92■□□□□ 0.46
LINC01398-201ENST00000416581 SLC39A6Q13433 755 aa17.92■□□□□ 0.46
LINC01398-201ENST00000416581 ZBTB1Q9Y2K1 713 aa17.92■□□□□ 0.46
LINC01398-201ENST00000416581 AFDNP55196 1824 aaKnown RBP17.92■□□□□ 0.46
LINC01398-201ENST00000416581 HEG1Q9ULI3 1381 aa17.91■□□□□ 0.46
LINC01398-201ENST00000416581 SCN7AQ01118 1682 aa17.9■□□□□ 0.46
LINC01398-201ENST00000416581 TNRC6CQ9HCJ0 1690 aaKnown RBP17.9■□□□□ 0.46
LINC01398-201ENST00000416581 APLP1P51693 650 aa17.9■□□□□ 0.46
LINC01398-201ENST00000416581 NFIXQ14938 502 aa17.9■□□□□ 0.46
LINC01398-201ENST00000416581 C9orf131Q5VYM1 1079 aa17.9■□□□□ 0.46
LINC01398-201ENST00000416581 ZNF790Q6PG37 636 aa17.9■□□□□ 0.46
LINC01398-201ENST00000416581 C16orf71Q8IYS4 520 aaPredicted RBP17.9■□□□□ 0.46
LINC01398-201ENST00000416581 FMNL2Q96PY5 1086 aa17.9■□□□□ 0.46
LINC01398-201ENST00000416581 CEMIPQ8WUJ3 1361 aa17.89■□□□□ 0.45
LINC01398-201ENST00000416581 SERPINB2P05120 415 aa17.88■□□□□ 0.45
LINC01398-201ENST00000416581 CANXP27824 592 aaKnown RBP17.88■□□□□ 0.45
LINC01398-201ENST00000416581 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
LINC01398-201ENST00000416581 EIF5P55010 431 aaKnown RBP17.88■□□□□ 0.45
LINC01398-201ENST00000416581 RNF181Q9P0P0 153 aa17.88■□□□□ 0.45
LINC01398-201ENST00000416581 CHRNA5P30532 468 aa17.87■□□□□ 0.45
LINC01398-201ENST00000416581 RBM46Q8TBY0 533 aaKnown RBP17.87■□□□□ 0.45
LINC01398-201ENST00000416581 SBF1O95248 1867 aa17.86■□□□□ 0.45
LINC01398-201ENST00000416581 H0YIN7 160 aa17.86■□□□□ 0.45
LINC01398-201ENST00000416581 TTLL6Q8N841 843 aa17.86■□□□□ 0.45
LINC01398-201ENST00000416581 IL17REQ8NFR9 667 aa17.86■□□□□ 0.45
LINC01398-201ENST00000416581 RTF1Q92541 710 aaKnown RBP17.86■□□□□ 0.45
LINC01398-201ENST00000416581 CARMIL3Q8ND23 1372 aa17.86■□□□□ 0.45
LINC01398-201ENST00000416581 FSTL1Q12841 308 aa17.85■□□□□ 0.45
LINC01398-201ENST00000416581 ZNF496Q96IT1 587 aaPredicted RBP17.85■□□□□ 0.45
LINC01398-201ENST00000416581 BCL2L12Q9HB09 334 aa17.85■□□□□ 0.45
LINC01398-201ENST00000416581 PRKAR2BP31323 418 aa17.84■□□□□ 0.45
LINC01398-201ENST00000416581 PDE6BP35913 854 aa17.84■□□□□ 0.45
LINC01398-201ENST00000416581 BTBD11A6QL63 1104 aa17.83■□□□□ 0.44
LINC01398-201ENST00000416581 RGL2O15211 777 aa17.83■□□□□ 0.44
LINC01398-201ENST00000416581 HTATSF1O43719 755 aaKnown RBP17.83■□□□□ 0.44
LINC01398-201ENST00000416581 NEFMP07197 916 aa17.83■□□□□ 0.44
LINC01398-201ENST00000416581 LMNB1P20700 586 aa17.83■□□□□ 0.44
LINC01398-201ENST00000416581 C2CD5Q86YS7 1000 aa17.83■□□□□ 0.44
LINC01398-201ENST00000416581 RSPH6AQ9H0K4 717 aa17.83■□□□□ 0.44
LINC01398-201ENST00000416581 NMRK2Q9NPI5 230 aa17.83■□□□□ 0.44
LINC01398-201ENST00000416581 BCORQ6W2J9 1755 aa17.82■□□□□ 0.44
LINC01398-201ENST00000416581 BRIP1Q9BX63 1249 aa17.82■□□□□ 0.44
LINC01398-201ENST00000416581 ZNF652Q9Y2D9 606 aa17.82■□□□□ 0.44
LINC01398-201ENST00000416581 NPHP1O15259 732 aa17.81■□□□□ 0.44
LINC01398-201ENST00000416581 WDR90Q96KV7 1748 aa17.81■□□□□ 0.44
LINC01398-201ENST00000416581 U2AF1L5P0DN76 240 aaPredicted RBP17.8■□□□□ 0.44
LINC01398-201ENST00000416581 ST5P78524 1137 aa17.8■□□□□ 0.44
LINC01398-201ENST00000416581 U2AF1Q01081 240 aaKnown RBP eCLIP17.8■□□□□ 0.44
LINC01398-201ENST00000416581 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
LINC01398-201ENST00000416581 SOGA3Q5TF21 947 aa17.8■□□□□ 0.44
LINC01398-201ENST00000416581 SETDB2Q96T68 719 aa17.8■□□□□ 0.44
LINC01398-201ENST00000416581 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
LINC01398-201ENST00000416581 TIAM2Q8IVF5 1701 aa17.8■□□□□ 0.44
LINC01398-201ENST00000416581 CLEC4GQ6UXB4 293 aa17.79■□□□□ 0.44
LINC01398-201ENST00000416581 BICDL1Q6ZP65 573 aa17.79■□□□□ 0.44
LINC01398-201ENST00000416581 CNBD1Q8NA66 436 aa17.79■□□□□ 0.44
LINC01398-201ENST00000416581 ANKRD31Q8N7Z5 1873 aa17.78■□□□□ 0.44
LINC01398-201ENST00000416581 SNRPA1P09661 255 aaKnown RBP17.78■□□□□ 0.44
LINC01398-201ENST00000416581 PPP2R1AP30153 589 aa17.78■□□□□ 0.44
LINC01398-201ENST00000416581 TBC1D9BQ66K14 1250 aa17.78■□□□□ 0.44
LINC01398-201ENST00000416581 SMC1BQ8NDV3 1235 aa17.78■□□□□ 0.44
LINC01398-201ENST00000416581 ARFGEF2Q9Y6D5 1785 aa17.77■□□□□ 0.44
LINC01398-201ENST00000416581 PRR5LQ6MZQ0 368 aa17.77■□□□□ 0.44
LINC01398-201ENST00000416581 DZIP3Q86Y13 1208 aaKnown RBP17.77■□□□□ 0.44
LINC01398-201ENST00000416581 CNKSR1Q969H4 720 aa17.77■□□□□ 0.44
LINC01398-201ENST00000416581 LTBP3Q9NS15 1303 aa17.76■□□□□ 0.43
LINC01398-201ENST00000416581 GLTPD2A6NH11 291 aa17.76■□□□□ 0.43
LINC01398-201ENST00000416581 VEGFAP15692 232 aaPredicted RBP17.76■□□□□ 0.43
LINC01398-201ENST00000416581 STYK1Q6J9G0 422 aa17.76■□□□□ 0.43
LINC01398-201ENST00000416581 DPY19L2Q6NUT2 758 aa17.76■□□□□ 0.43
LINC01398-201ENST00000416581 PHACTR3Q96KR7 559 aa17.76■□□□□ 0.43
LINC01398-201ENST00000416581 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
LINC01398-201ENST00000416581 TBC1D2BQ9UPU7 963 aa17.76■□□□□ 0.43
LINC01398-201ENST00000416581 LAMB4A4D0S4 1761 aa17.76■□□□□ 0.43
LINC01398-201ENST00000416581 COL11A2P13942 1736 aaPredicted RBP17.75■□□□□ 0.43
LINC01398-201ENST00000416581 DICER1Q9UPY3 1922 aaKnown RBP17.75■□□□□ 0.43
LINC01398-201ENST00000416581 CAMTA2O94983 1202 aa17.75■□□□□ 0.43
LINC01398-201ENST00000416581 A1BGP04217 495 aa17.75■□□□□ 0.43
LINC01398-201ENST00000416581 RASSF7Q02833 373 aa17.75■□□□□ 0.43
LINC01398-201ENST00000416581 PNISRQ8TF01 805 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms