RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 AFDNP55196 1824 aaKnown RBP10.72□□□□□ -0.69
RBM39-208ENST00000416108 TRIM37O94972 964 aa10.72□□□□□ -0.69
RBM39-208ENST00000416108 STARD3NLO95772 234 aa10.72□□□□□ -0.69
RBM39-208ENST00000416108 SLC4A2P04920 1241 aa10.72□□□□□ -0.69
RBM39-208ENST00000416108 DBF4Q9UBU7 674 aaPredicted RBP10.72□□□□□ -0.69
RBM39-208ENST00000416108 ERBB4Q15303 1308 aa10.72□□□□□ -0.69
RBM39-208ENST00000416108 LOC102724428A0A0B4J2F2 783 aa10.71□□□□□ -0.69
RBM39-208ENST00000416108 PRAMEF22A3QJZ6 481 aa10.71□□□□□ -0.69
RBM39-208ENST00000416108 HMGB2P26583 209 aaKnown RBP10.71□□□□□ -0.69
RBM39-208ENST00000416108 ATP6V1AP38606 617 aa10.71□□□□□ -0.69
RBM39-208ENST00000416108 SIK1P57059 783 aa10.71□□□□□ -0.69
RBM39-208ENST00000416108 NPM2Q86SE8 214 aaKnown RBP10.71□□□□□ -0.69
RBM39-208ENST00000416108 DNAJC10Q8IXB1 793 aa10.71□□□□□ -0.69
RBM39-208ENST00000416108 FTSJ3Q8IY81 847 aaKnown RBP10.71□□□□□ -0.69
RBM39-208ENST00000416108 API5Q9BZZ5 524 aaKnown RBP10.71□□□□□ -0.69
RBM39-208ENST00000416108 HYPKQ9NX55 129 aa10.71□□□□□ -0.69
RBM39-208ENST00000416108 CHPF2Q9P2E5 772 aa10.71□□□□□ -0.69
RBM39-208ENST00000416108 NOB1Q9ULX3 412 aaKnown RBP10.71□□□□□ -0.69
RBM39-208ENST00000416108 ARFGEF2Q9Y6D5 1785 aa10.71□□□□□ -0.69
RBM39-208ENST00000416108 MYH14Q7Z406 1995 aaKnown RBP10.7□□□□□ -0.7
RBM39-208ENST00000416108 RREB1Q92766 1687 aa10.7□□□□□ -0.7
RBM39-208ENST00000416108 PTPRCP08575 1304 aa10.7□□□□□ -0.7
RBM39-208ENST00000416108 RNF123Q5XPI4 1314 aa10.7□□□□□ -0.7
RBM39-208ENST00000416108 PLIN1O60240 522 aa10.7□□□□□ -0.7
RBM39-208ENST00000416108 BRPF1P55201 1214 aaPredicted RBP10.7□□□□□ -0.7
RBM39-208ENST00000416108 DDX21Q9NR30 783 aaKnown RBP eCLIP10.7□□□□□ -0.7
RBM39-208ENST00000416108 USP16Q9Y5T5 823 aa10.7□□□□□ -0.7
RBM39-208ENST00000416108 DDX58O95786 925 aaKnown RBP10.69□□□□□ -0.7
RBM39-208ENST00000416108 MYL6BP14649 208 aa10.69□□□□□ -0.7
RBM39-208ENST00000416108 SF3B2Q13435 895 aaKnown RBP10.69□□□□□ -0.7
RBM39-208ENST00000416108 FKBP5Q13451 457 aaPredicted RBP10.69□□□□□ -0.7
RBM39-208ENST00000416108 ATF7IPQ6VMQ6 1270 aa10.69□□□□□ -0.7
RBM39-208ENST00000416108 ARHGAP45Q92619 1136 aa10.69□□□□□ -0.7
RBM39-208ENST00000416108 CCNL1Q9UK58 526 aaPredicted RBP10.69□□□□□ -0.7
RBM39-208ENST00000416108 ANKRD36CQ5JPF3 1778 aa10.69□□□□□ -0.7
RBM39-208ENST00000416108 C4BP0C0L5 1744 aa10.69□□□□□ -0.7
RBM39-208ENST00000416108 NUP98P52948 1817 aa10.68□□□□□ -0.7
RBM39-208ENST00000416108 NUP188Q5SRE5 1749 aa10.68□□□□□ -0.7
RBM39-208ENST00000416108 IRX6P78412 446 aaPredicted RBP10.68□□□□□ -0.7
RBM39-208ENST00000416108 FLIIQ13045 1269 aa10.68□□□□□ -0.7
RBM39-208ENST00000416108 PDE3AQ14432 1141 aa10.68□□□□□ -0.7
RBM39-208ENST00000416108 DZIP1LQ8IYY4 767 aaKnown RBP10.68□□□□□ -0.7
RBM39-208ENST00000416108 ZNF330Q9Y3S2 320 aaPredicted RBP10.68□□□□□ -0.7
RBM39-208ENST00000416108 APBA3O96018 575 aa10.67□□□□□ -0.7
RBM39-208ENST00000416108 ANXA1P04083 346 aa10.67□□□□□ -0.7
RBM39-208ENST00000416108 FKBP8Q14318 412 aa10.67□□□□□ -0.7
RBM39-208ENST00000416108 PTF1AQ7RTS3 328 aa10.67□□□□□ -0.7
RBM39-208ENST00000416108 CLUAP1Q96AJ1 413 aa10.67□□□□□ -0.7
RBM39-208ENST00000416108 PXDNLA1KZ92 1463 aa10.67□□□□□ -0.7
RBM39-208ENST00000416108 UBR3Q6ZT12 1888 aa10.66□□□□□ -0.7
RBM39-208ENST00000416108 A1BGP04217 495 aa10.66□□□□□ -0.7
RBM39-208ENST00000416108 CYP19A1P11511 503 aaPredicted RBP10.66□□□□□ -0.7
RBM39-208ENST00000416108 TRIM27P14373 513 aa10.66□□□□□ -0.7
RBM39-208ENST00000416108 AIMP1Q12904 312 aaKnown RBP10.66□□□□□ -0.7
RBM39-208ENST00000416108 SLC27A3Q5K4L6 730 aa10.66□□□□□ -0.7
RBM39-208ENST00000416108 G2E3Q7L622 706 aa10.66□□□□□ -0.7
RBM39-208ENST00000416108 CHMP4BQ9H444 224 aaKnown RBP10.66□□□□□ -0.7
RBM39-208ENST00000416108 PHAXQ9H814 394 aaKnown RBP10.66□□□□□ -0.7
RBM39-208ENST00000416108 CCDC87Q9NVE4 849 aa10.66□□□□□ -0.7
RBM39-208ENST00000416108 BCORQ6W2J9 1755 aa10.66□□□□□ -0.7
RBM39-208ENST00000416108 CNTNAP4Q9C0A0 1308 aa10.65□□□□□ -0.7
RBM39-208ENST00000416108 CRKLP46109 303 aaKnown RBP10.65□□□□□ -0.7
RBM39-208ENST00000416108 PIP4K2AP48426 406 aaPredicted RBP10.65□□□□□ -0.7
RBM39-208ENST00000416108 ITPK1Q13572 414 aa10.65□□□□□ -0.7
RBM39-208ENST00000416108 PROSER3Q2NL68 480 aa10.65□□□□□ -0.7
RBM39-208ENST00000416108 SLC4A10Q6U841 1118 aa10.65□□□□□ -0.7
RBM39-208ENST00000416108 KIF6Q6ZMV9 814 aa10.65□□□□□ -0.7
RBM39-208ENST00000416108 RIC3Q7Z5B4 369 aa10.65□□□□□ -0.7
RBM39-208ENST00000416108 ITPRIPQ8IWB1 547 aa10.65□□□□□ -0.7
RBM39-208ENST00000416108 XAGE3Q8WTP9 111 aa10.65□□□□□ -0.7
RBM39-208ENST00000416108 SLC4A9Q96Q91 983 aa10.65□□□□□ -0.7
RBM39-208ENST00000416108 ARXQ96QS3 562 aa10.65□□□□□ -0.7
RBM39-208ENST00000416108 C4AP0C0L4 1744 aa10.64□□□□□ -0.71
RBM39-208ENST00000416108 PLSCR1O15162 318 aa10.64□□□□□ -0.71
RBM39-208ENST00000416108 IL6STP40189 918 aaPredicted RBP10.64□□□□□ -0.71
RBM39-208ENST00000416108 BAG6P46379 1132 aa10.64□□□□□ -0.71
RBM39-208ENST00000416108 PDIA6Q15084 440 aa10.64□□□□□ -0.71
RBM39-208ENST00000416108 ERICH6BQ5W0A0 696 aa10.64□□□□□ -0.71
RBM39-208ENST00000416108 COPS6Q7L5N1 327 aa10.64□□□□□ -0.71
RBM39-208ENST00000416108 PANK1Q8TE04 598 aa10.64□□□□□ -0.71
RBM39-208ENST00000416108 CRBNQ96SW2 442 aa10.64□□□□□ -0.71
RBM39-208ENST00000416108 ZBTB1Q9Y2K1 713 aa10.64□□□□□ -0.71
RBM39-208ENST00000416108 COG6Q9Y2V7 657 aa10.64□□□□□ -0.71
RBM39-208ENST00000416108 GTF3C3Q9Y5Q9 886 aa10.64□□□□□ -0.71
RBM39-208ENST00000416108 TUBGCP6Q96RT7 1819 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 ABCC4O15439 1325 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 A0A087WZG4 1122 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 NBPF26B4DH59 902 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 CCT4P50991 539 aaKnown RBP10.63□□□□□ -0.71
RBM39-208ENST00000416108 NEXNQ0ZGT2 675 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 MVPQ14764 893 aaKnown RBP10.63□□□□□ -0.71
RBM39-208ENST00000416108 TXNRD1Q16881 649 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 NBPF14Q5TI25 921 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 NBPF10Q6P3W6 841 aaKnown RBP10.63□□□□□ -0.71
RBM39-208ENST00000416108 KSR2Q6VAB6 950 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 TMEM57Q8N5G2 664 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 NBPF15Q8N660 670 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 LINC00116Q8NCU8 138 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 DNAAF4Q8WXU2 420 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 AK7Q96M32 723 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms