RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 STK17AQ9UEE5 414 aa9.04□□□□□ -0.96
CSTF1-202ENST00000415828 RAPGEF6Q8TEU7 1601 aa9.04□□□□□ -0.96
CSTF1-202ENST00000415828 NEURL4Q96JN8 1562 aa9.03□□□□□ -0.96
CSTF1-202ENST00000415828 RAPGEF2Q9Y4G8 1499 aa9.03□□□□□ -0.96
CSTF1-202ENST00000415828 IGF1RP08069 1367 aa9.03□□□□□ -0.96
CSTF1-202ENST00000415828 RNF217Q8TC41 542 aa9.03□□□□□ -0.96
CSTF1-202ENST00000415828 CFAP74Q9C0B2 1584 aa9.03□□□□□ -0.96
CSTF1-202ENST00000415828 ATP10AO60312 1499 aa9.02□□□□□ -0.96
CSTF1-202ENST00000415828 MCCD1P59942 119 aaPredicted RBP9.02□□□□□ -0.97
CSTF1-202ENST00000415828 RNF20Q5VTR2 975 aa9.02□□□□□ -0.97
CSTF1-202ENST00000415828 CCDC155Q8N6L0 562 aa9.02□□□□□ -0.97
CSTF1-202ENST00000415828 C9orf84Q5VXU9 1444 aa9.02□□□□□ -0.97
CSTF1-202ENST00000415828 PLA2R1Q13018 1463 aa9.02□□□□□ -0.97
CSTF1-202ENST00000415828 MAGI2Q86UL8 1455 aa9.02□□□□□ -0.97
CSTF1-202ENST00000415828 LRP5O75197 1615 aa9.02□□□□□ -0.97
CSTF1-202ENST00000415828 WASHC4Q2M389 1173 aa9.01□□□□□ -0.97
CSTF1-202ENST00000415828 FOXD4L5Q5VV16 416 aaPredicted RBP9.01□□□□□ -0.97
CSTF1-202ENST00000415828 CEP170BQ9Y4F5 1589 aaPredicted RBP9□□□□□ -0.97
CSTF1-202ENST00000415828 ATP5J2-PTCD1G3V325 749 aa9□□□□□ -0.97
CSTF1-202ENST00000415828 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
CSTF1-202ENST00000415828 EIF4G2P78344 907 aaKnown RBP eCLIP9□□□□□ -0.97
CSTF1-202ENST00000415828 ZSCAN1Q8NBB4 408 aa9□□□□□ -0.97
CSTF1-202ENST00000415828 ZNF592Q92610 1267 aa9□□□□□ -0.97
CSTF1-202ENST00000415828 LOC100996750A0A140TA64 210 aa8.99□□□□□ -0.97
CSTF1-202ENST00000415828 SLC35F4A4IF30 521 aa8.99□□□□□ -0.97
CSTF1-202ENST00000415828 SCTRP47872 440 aa8.99□□□□□ -0.97
CSTF1-202ENST00000415828 ERVK-9P63128 1117 aa8.99□□□□□ -0.97
CSTF1-202ENST00000415828 CC2D2BQ6DHV5 1058 aa8.99□□□□□ -0.97
CSTF1-202ENST00000415828 CCDC125Q86Z20 511 aa8.99□□□□□ -0.97
CSTF1-202ENST00000415828 KRTAP4-6Q9BYQ5 205 aa8.99□□□□□ -0.97
CSTF1-202ENST00000415828 PCDHB11Q9Y5F2 797 aa8.99□□□□□ -0.97
CSTF1-202ENST00000415828 ATP10BO94823 1461 aa8.99□□□□□ -0.97
CSTF1-202ENST00000415828 MROH2AA6NES4 1674 aa8.98□□□□□ -0.97
CSTF1-202ENST00000415828 PROSER2Q86WR7 435 aaPredicted RBP8.98□□□□□ -0.97
CSTF1-202ENST00000415828 GPR161Q8N6U8 529 aaKnown RBP8.98□□□□□ -0.97
CSTF1-202ENST00000415828 MEN1O00255 615 aa8.97□□□□□ -0.97
CSTF1-202ENST00000415828 LYSMD3Q7Z3D4 306 aa8.97□□□□□ -0.97
CSTF1-202ENST00000415828 CEP126Q9P2H0 1117 aa8.97□□□□□ -0.97
CSTF1-202ENST00000415828 ROBO1Q9Y6N7 1651 aa8.97□□□□□ -0.97
CSTF1-202ENST00000415828 SENP3-EIF4A1A0A087X0R7 540 aa8.96□□□□□ -0.98
CSTF1-202ENST00000415828 A0A1W2PRU2 124 aa8.96□□□□□ -0.98
CSTF1-202ENST00000415828 ITGA6P23229 1130 aa8.96□□□□□ -0.98
CSTF1-202ENST00000415828 SEMA3FQ13275 785 aa8.96□□□□□ -0.98
CSTF1-202ENST00000415828 PRICKLE2Q7Z3G6 844 aa8.96□□□□□ -0.98
CSTF1-202ENST00000415828 DNMT1P26358 1616 aaKnown RBP8.95□□□□□ -0.98
CSTF1-202ENST00000415828 RNF144AP50876 292 aaPredicted RBP8.95□□□□□ -0.98
CSTF1-202ENST00000415828 ESF1Q9H501 851 aaKnown RBP8.95□□□□□ -0.98
CSTF1-202ENST00000415828 DIP2CQ9Y2E4 1556 aa8.95□□□□□ -0.98
CSTF1-202ENST00000415828 ABCA6Q8N139 1617 aa8.94□□□□□ -0.98
CSTF1-202ENST00000415828 CLTCQ00610 1675 aaKnown RBP8.94□□□□□ -0.98
CSTF1-202ENST00000415828 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
CSTF1-202ENST00000415828 CDC14CA4D256 554 aa8.94□□□□□ -0.98
CSTF1-202ENST00000415828 FAM181BA6NEQ2 426 aa8.94□□□□□ -0.98
CSTF1-202ENST00000415828 POM121CA8CG34 1229 aa8.94□□□□□ -0.98
CSTF1-202ENST00000415828 RHOQP17081 205 aa8.94□□□□□ -0.98
CSTF1-202ENST00000415828 KRT76Q01546 638 aa8.94□□□□□ -0.98
CSTF1-202ENST00000415828 CYP2U1Q7Z449 544 aa8.94□□□□□ -0.98
CSTF1-202ENST00000415828 NANOS1Q8WY41 292 aaKnown RBP8.94□□□□□ -0.98
CSTF1-202ENST00000415828 CCDC85AQ96PX6 553 aaPredicted RBP8.94□□□□□ -0.98
CSTF1-202ENST00000415828 CDCA7Q9BWT1 371 aaPredicted RBP8.94□□□□□ -0.98
CSTF1-202ENST00000415828 OSBPL3Q9H4L5 887 aa8.94□□□□□ -0.98
CSTF1-202ENST00000415828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.94□□□□□ -0.98
CSTF1-202ENST00000415828 LRP6O75581 1613 aa8.94□□□□□ -0.98
CSTF1-202ENST00000415828 CTTNBP2Q8WZ74 1663 aa8.94□□□□□ -0.98
CSTF1-202ENST00000415828 A6NJR5 290 aa8.93□□□□□ -0.98
CSTF1-202ENST00000415828 VWA5B2Q8N398 1253 aa8.93□□□□□ -0.98
CSTF1-202ENST00000415828 CNTNAP3BQ96NU0 1288 aa8.93□□□□□ -0.98
CSTF1-202ENST00000415828 CNTNAP3Q9BZ76 1288 aa8.93□□□□□ -0.98
CSTF1-202ENST00000415828 ARHGEF10LQ9HCE6 1279 aa8.93□□□□□ -0.98
CSTF1-202ENST00000415828 SYNMO15061 1565 aa8.93□□□□□ -0.98
CSTF1-202ENST00000415828 CARMIL1Q5VZK9 1371 aa8.92□□□□□ -0.98
CSTF1-202ENST00000415828 TRAK2O60296 914 aa8.92□□□□□ -0.98
CSTF1-202ENST00000415828 SLFNL1Q499Z3 407 aa8.92□□□□□ -0.98
CSTF1-202ENST00000415828 NLRP3Q96P20 1036 aa8.92□□□□□ -0.98
CSTF1-202ENST00000415828 NPATQ14207 1427 aa8.91□□□□□ -0.98
CSTF1-202ENST00000415828 YY1P25490 414 aa8.91□□□□□ -0.98
CSTF1-202ENST00000415828 SOX11P35716 441 aa8.91□□□□□ -0.98
CSTF1-202ENST00000415828 TSGA10IPQ3SY00 556 aa8.91□□□□□ -0.98
CSTF1-202ENST00000415828 SLC27A3Q5K4L6 730 aa8.91□□□□□ -0.98
CSTF1-202ENST00000415828 SV2AQ7L0J3 742 aa8.91□□□□□ -0.98
CSTF1-202ENST00000415828 C14orf37Q86TY3 774 aa8.91□□□□□ -0.98
CSTF1-202ENST00000415828 COL25A1Q9BXS0 654 aaPredicted RBP8.91□□□□□ -0.98
CSTF1-202ENST00000415828 RAB6BQ9NRW1 208 aa8.91□□□□□ -0.98
CSTF1-202ENST00000415828 GPC1P35052 558 aa8.9□□□□□ -0.98
CSTF1-202ENST00000415828 CLN3Q13286 438 aa8.9□□□□□ -0.98
CSTF1-202ENST00000415828 RNF135Q8IUD6 432 aa8.9□□□□□ -0.98
CSTF1-202ENST00000415828 FNBP4Q8N3X1 1017 aaPredicted RBP8.9□□□□□ -0.98
CSTF1-202ENST00000415828 AGLP35573 1532 aa8.9□□□□□ -0.99
CSTF1-202ENST00000415828 CDK12Q9NYV4 1490 aaPredicted RBP8.89□□□□□ -0.99
CSTF1-202ENST00000415828 IQGAP1P46940 1657 aa8.89□□□□□ -0.99
CSTF1-202ENST00000415828 MYCP01106 439 aaPredicted RBP8.89□□□□□ -0.99
CSTF1-202ENST00000415828 RNFT1Q5M7Z0 435 aa8.89□□□□□ -0.99
CSTF1-202ENST00000415828 ZMYND15Q9H091 742 aa8.89□□□□□ -0.99
CSTF1-202ENST00000415828 CUEDC1Q9NWM3 386 aaPredicted RBP8.89□□□□□ -0.99
CSTF1-202ENST00000415828 REREQ9P2R6 1566 aa8.89□□□□□ -0.99
CSTF1-202ENST00000415828 RGS12O14924 1447 aa8.88□□□□□ -0.99
CSTF1-202ENST00000415828 SCAPERQ9BY12 1400 aa8.88□□□□□ -0.99
CSTF1-202ENST00000415828 ITSN2Q9NZM3 1697 aa8.88□□□□□ -0.99
CSTF1-202ENST00000415828 RXRBP28702 533 aa8.88□□□□□ -0.99
CSTF1-202ENST00000415828 POU4F2Q12837 409 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms