RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 WWC3Q9ULE0 1092 aa27.19■■□□□ 1.94
PTPRU-203ENST00000415600 COL15A1P39059 1388 aa27.19■■□□□ 1.94
PTPRU-203ENST00000415600 PXDNLA1KZ92 1463 aa27.19■■□□□ 1.94
PTPRU-203ENST00000415600 ZBTB1Q9Y2K1 713 aa27.18■■□□□ 1.94
PTPRU-203ENST00000415600 CEMIPQ8WUJ3 1361 aa27.18■■□□□ 1.94
PTPRU-203ENST00000415600 KIF13BQ9NQT8 1826 aa27.18■■□□□ 1.94
PTPRU-203ENST00000415600 BTBD11A6QL63 1104 aa27.18■■□□□ 1.94
PTPRU-203ENST00000415600 GIGYF1O75420 1035 aaPredicted RBP27.18■■□□□ 1.94
PTPRU-203ENST00000415600 HEG1Q9ULI3 1381 aa27.17■■□□□ 1.94
PTPRU-203ENST00000415600 A0A0G2JLW4 131 aa27.17■■□□□ 1.94
PTPRU-203ENST00000415600 DDX10Q13206 875 aaKnown RBP27.17■■□□□ 1.94
PTPRU-203ENST00000415600 USPL1Q5W0Q7 1092 aa27.17■■□□□ 1.94
PTPRU-203ENST00000415600 ZNF496Q96IT1 587 aaPredicted RBP27.17■■□□□ 1.94
PTPRU-203ENST00000415600 UBR2Q8IWV8 1755 aa27.16■■□□□ 1.94
PTPRU-203ENST00000415600 HTATSF1O43719 755 aaKnown RBP27.16■■□□□ 1.94
PTPRU-203ENST00000415600 CANXP27824 592 aaKnown RBP27.16■■□□□ 1.94
PTPRU-203ENST00000415600 BCS1LQ9Y276 419 aa27.16■■□□□ 1.94
PTPRU-203ENST00000415600 PNNQ9H307 717 aaKnown RBP27.15■■□□□ 1.94
PTPRU-203ENST00000415600 DPEP1P16444 411 aa27.14■■□□□ 1.93
PTPRU-203ENST00000415600 TM4SF1P30408 202 aa27.13■■□□□ 1.93
PTPRU-203ENST00000415600 DDR1Q08345 913 aa27.13■■□□□ 1.93
PTPRU-203ENST00000415600 PIM2Q9P1W9 311 aa27.13■■□□□ 1.93
PTPRU-203ENST00000415600 POLRMTO00411 1230 aaKnown RBP27.12■■□□□ 1.93
PTPRU-203ENST00000415600 C1QTNF8P60827 252 aa27.11■■□□□ 1.93
PTPRU-203ENST00000415600 ATP10DQ9P241 1426 aa27.11■■□□□ 1.93
PTPRU-203ENST00000415600 GPBP1L1Q9HC44 474 aaPredicted RBP27.1■■□□□ 1.93
PTPRU-203ENST00000415600 SIPA1L3O60292 1781 aaPredicted RBP27.1■■□□□ 1.93
PTPRU-203ENST00000415600 IL6STP40189 918 aaPredicted RBP27.09■■□□□ 1.93
PTPRU-203ENST00000415600 EIF5P55010 431 aaKnown RBP27.09■■□□□ 1.93
PTPRU-203ENST00000415600 NFIXQ14938 502 aa27.09■■□□□ 1.93
PTPRU-203ENST00000415600 DALRD3Q5D0E6 543 aaKnown RBP27.09■■□□□ 1.93
PTPRU-203ENST00000415600 ZNF330Q9Y3S2 320 aaPredicted RBP27.09■■□□□ 1.93
PTPRU-203ENST00000415600 N4BP2Q86UW6 1770 aaPredicted RBP27.08■■□□□ 1.93
PTPRU-203ENST00000415600 RALBP1Q15311 655 aa27.08■■□□□ 1.93
PTPRU-203ENST00000415600 MCM10Q7L590 875 aa27.08■■□□□ 1.93
PTPRU-203ENST00000415600 ARHGAP27Q6ZUM4 889 aa27.07■■□□□ 1.92
PTPRU-203ENST00000415600 ADCY9O60503 1353 aa27.06■■□□□ 1.92
PTPRU-203ENST00000415600 SNRPA1P09661 255 aaKnown RBP27.05■■□□□ 1.92
PTPRU-203ENST00000415600 MAPK8IP3Q9UPT6 1336 aa27.05■■□□□ 1.92
PTPRU-203ENST00000415600 SERPINB2P05120 415 aa27.05■■□□□ 1.92
PTPRU-203ENST00000415600 KIAA1551Q9HCM1 1747 aa27.05■■□□□ 1.92
PTPRU-203ENST00000415600 TAF7Q15545 349 aaPredicted RBP27.04■■□□□ 1.92
PTPRU-203ENST00000415600 PNISRQ8TF01 805 aaKnown RBP27.03■■□□□ 1.92
PTPRU-203ENST00000415600 BCL2L12Q9HB09 334 aa27.03■■□□□ 1.92
PTPRU-203ENST00000415600 KCNA3P22001 575 aa27.02■■□□□ 1.92
PTPRU-203ENST00000415600 KCNQ3O43525 872 aa27.01■■□□□ 1.92
PTPRU-203ENST00000415600 A1BGP04217 495 aa27.01■■□□□ 1.91
PTPRU-203ENST00000415600 DCTN1Q14203 1278 aa27.01■■□□□ 1.91
PTPRU-203ENST00000415600 BICDL1Q6ZP65 573 aa27.01■■□□□ 1.91
PTPRU-203ENST00000415600 PDZRN3Q9UPQ7 1066 aa27.01■■□□□ 1.91
PTPRU-203ENST00000415600 ZNF526Q8TF50 670 aaPredicted RBP27■■□□□ 1.91
PTPRU-203ENST00000415600 TBC1D2BQ9UPU7 963 aa27■■□□□ 1.91
PTPRU-203ENST00000415600 SENP3-EIF4A1A0A087X0R7 540 aa26.99■■□□□ 1.91
PTPRU-203ENST00000415600 NPHP1O15259 732 aa26.99■■□□□ 1.91
PTPRU-203ENST00000415600 CHRNA5P30532 468 aa26.99■■□□□ 1.91
PTPRU-203ENST00000415600 NFE2L2Q16236 605 aa26.99■■□□□ 1.91
PTPRU-203ENST00000415600 SETDB2Q96T68 719 aa26.98■■□□□ 1.91
PTPRU-203ENST00000415600 ZNF652Q9Y2D9 606 aa26.98■■□□□ 1.91
PTPRU-203ENST00000415600 CARMIL3Q8ND23 1372 aa26.98■■□□□ 1.91
PTPRU-203ENST00000415600 H0YIN7 160 aa26.97■■□□□ 1.91
PTPRU-203ENST00000415600 BRCA1P38398 1863 aaKnown RBP26.97■■□□□ 1.91
PTPRU-203ENST00000415600 DZIP3Q86Y13 1208 aaKnown RBP26.97■■□□□ 1.91
PTPRU-203ENST00000415600 USP16Q9Y5T5 823 aa26.97■■□□□ 1.91
PTPRU-203ENST00000415600 PLEKHF1Q96S99 279 aa26.97■■□□□ 1.91
PTPRU-203ENST00000415600 ARFGEF1Q9Y6D6 1849 aa26.96■■□□□ 1.91
PTPRU-203ENST00000415600 TBC1D9BQ66K14 1250 aa26.96■■□□□ 1.91
PTPRU-203ENST00000415600 PDE6BP35913 854 aa26.95■■□□□ 1.9
PTPRU-203ENST00000415600 NRXN2Q9P2S2 1712 aa26.94■■□□□ 1.9
PTPRU-203ENST00000415600 CLEC4GQ6UXB4 293 aa26.94■■□□□ 1.9
PTPRU-203ENST00000415600 C2CD5Q86YS7 1000 aa26.94■■□□□ 1.9
PTPRU-203ENST00000415600 TTLL6Q8N841 843 aa26.94■■□□□ 1.9
PTPRU-203ENST00000415600 SCN7AQ01118 1682 aa26.93■■□□□ 1.9
PTPRU-203ENST00000415600 CAMTA2O94983 1202 aa26.93■■□□□ 1.9
PTPRU-203ENST00000415600 AFDNP55196 1824 aaKnown RBP26.93■■□□□ 1.9
PTPRU-203ENST00000415600 MYBBP1AQ9BQG0 1328 aaKnown RBP26.93■■□□□ 1.9
PTPRU-203ENST00000415600 ST5P78524 1137 aa26.92■■□□□ 1.9
PTPRU-203ENST00000415600 CNBD1Q8NA66 436 aa26.92■■□□□ 1.9
PTPRU-203ENST00000415600 BRIP1Q9BX63 1249 aa26.92■■□□□ 1.9
PTPRU-203ENST00000415600 RGL2O15211 777 aa26.92■■□□□ 1.9
PTPRU-203ENST00000415600 C9orf131Q5VYM1 1079 aa26.92■■□□□ 1.9
PTPRU-203ENST00000415600 LMOD3Q0VAK6 560 aa26.91■■□□□ 1.9
PTPRU-203ENST00000415600 ANP32CO43423 234 aa26.89■■□□□ 1.9
PTPRU-203ENST00000415600 MIS18AQ9NYP9 233 aa26.89■■□□□ 1.9
PTPRU-203ENST00000415600 PRAMEF22A3QJZ6 481 aa26.88■■□□□ 1.89
PTPRU-203ENST00000415600 PRR5LQ6MZQ0 368 aa26.88■■□□□ 1.89
PTPRU-203ENST00000415600 RNF181Q9P0P0 153 aa26.88■■□□□ 1.89
PTPRU-203ENST00000415600 PIP4K2AP48426 406 aaPredicted RBP26.87■■□□□ 1.89
PTPRU-203ENST00000415600 NBPF5PQ86XG9 351 aaPredicted RBP26.86■■□□□ 1.89
PTPRU-203ENST00000415600 ZNF622Q969S3 477 aaKnown RBP eCLIP26.86■■□□□ 1.89
PTPRU-203ENST00000415600 RIPK4P57078 832 aa26.85■■□□□ 1.89
PTPRU-203ENST00000415600 WDR43Q15061 677 aaKnown RBP eCLIP26.85■■□□□ 1.89
PTPRU-203ENST00000415600 DLG5Q8TDM6 1919 aa26.85■■□□□ 1.89
PTPRU-203ENST00000415600 KDM2BQ8NHM5 1336 aa26.85■■□□□ 1.89
PTPRU-203ENST00000415600 NBPF26B4DH59 902 aa26.84■■□□□ 1.89
PTPRU-203ENST00000415600 EIF4A1P60842 406 aaKnown RBP26.84■■□□□ 1.89
PTPRU-203ENST00000415600 NBPF10Q6P3W6 841 aaKnown RBP26.84■■□□□ 1.89
PTPRU-203ENST00000415600 NBPF15Q8N660 670 aa26.84■■□□□ 1.89
PTPRU-203ENST00000415600 BABAM1Q9NWV8 329 aa26.84■■□□□ 1.89
PTPRU-203ENST00000415600 ZC3H4Q9UPT8 1303 aaKnown RBP26.84■■□□□ 1.89
PTPRU-203ENST00000415600 DLEC1Q9Y238 1755 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms