RNA–Protein interactions for RNA: ENST00000415051.5

UBE2D4-202, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-202ENST00000415051 HSPA1BP0DMV9 641 aaKnown RBP23.71■■□□□ 1.39
UBE2D4-202ENST00000415051 VEGFAP15692 232 aaPredicted RBP23.7■■□□□ 1.38
UBE2D4-202ENST00000415051 LMNB1P20700 586 aa23.7■■□□□ 1.38
UBE2D4-202ENST00000415051 NFIXQ14938 502 aa23.7■■□□□ 1.38
UBE2D4-202ENST00000415051 DNAJC10Q8IXB1 793 aa23.7■■□□□ 1.38
UBE2D4-202ENST00000415051 POTECB2RU33 542 aa23.69■■□□□ 1.38
UBE2D4-202ENST00000415051 C1orf141Q5JVX7 400 aa23.69■■□□□ 1.38
UBE2D4-202ENST00000415051 BCL2L12Q9HB09 334 aa23.69■■□□□ 1.38
UBE2D4-202ENST00000415051 NFKBIEO00221 500 aa23.67■■□□□ 1.38
UBE2D4-202ENST00000415051 ZPR1O75312 459 aa23.67■■□□□ 1.38
UBE2D4-202ENST00000415051 CARMIL3Q8ND23 1372 aa23.66■■□□□ 1.38
UBE2D4-202ENST00000415051 CYP19A1P11511 503 aaPredicted RBP23.66■■□□□ 1.38
UBE2D4-202ENST00000415051 NARFQ9UHQ1 456 aa23.66■■□□□ 1.38
UBE2D4-202ENST00000415051 VIRMAQ69YN4 1812 aaKnown RBP23.66■■□□□ 1.38
UBE2D4-202ENST00000415051 MRC1P22897 1456 aa23.65■■□□□ 1.38
UBE2D4-202ENST00000415051 SULT6B1Q6IMI4 303 aa23.65■■□□□ 1.38
UBE2D4-202ENST00000415051 COL15A1P39059 1388 aa23.65■■□□□ 1.38
UBE2D4-202ENST00000415051 SERPINB2P05120 415 aa23.63■■□□□ 1.37
UBE2D4-202ENST00000415051 ANKRD31Q8N7Z5 1873 aa23.63■■□□□ 1.37
UBE2D4-202ENST00000415051 TTLL6Q8N841 843 aa23.63■■□□□ 1.37
UBE2D4-202ENST00000415051 SLC52A2Q9HAB3 445 aa23.63■■□□□ 1.37
UBE2D4-202ENST00000415051 LGR6Q9HBX8 967 aa23.63■■□□□ 1.37
UBE2D4-202ENST00000415051 ZBTB1Q9Y2K1 713 aa23.63■■□□□ 1.37
UBE2D4-202ENST00000415051 POLR3GLQ9BT43 218 aa23.62■■□□□ 1.37
UBE2D4-202ENST00000415051 DICER1Q9UPY3 1922 aaKnown RBP23.62■■□□□ 1.37
UBE2D4-202ENST00000415051 IL13P35225 146 aa23.61■■□□□ 1.37
UBE2D4-202ENST00000415051 SLC39A6Q13433 755 aa23.61■■□□□ 1.37
UBE2D4-202ENST00000415051 C2CD5Q86YS7 1000 aa23.61■■□□□ 1.37
UBE2D4-202ENST00000415051 FER1L6Q2WGJ9 1857 aa23.6■■□□□ 1.37
UBE2D4-202ENST00000415051 AKAP4Q5JQC9 854 aa23.6■■□□□ 1.37
UBE2D4-202ENST00000415051 PANK3Q9H999 370 aa23.6■■□□□ 1.37
UBE2D4-202ENST00000415051 COL11A2P13942 1736 aaPredicted RBP23.59■■□□□ 1.37
UBE2D4-202ENST00000415051 UBR2Q8IWV8 1755 aa23.59■■□□□ 1.37
UBE2D4-202ENST00000415051 H0YIN7 160 aa23.56■■□□□ 1.36
UBE2D4-202ENST00000415051 RNMTO43148 476 aaKnown RBP23.56■■□□□ 1.36
UBE2D4-202ENST00000415051 POTEIP0CG38 1075 aa23.54■■□□□ 1.36
UBE2D4-202ENST00000415051 POTEJP0CG39 1038 aa23.54■■□□□ 1.36
UBE2D4-202ENST00000415051 MORC1Q86VD1 984 aa23.54■■□□□ 1.36
UBE2D4-202ENST00000415051 VSIG10Q8N0Z9 540 aa23.53■■□□□ 1.36
UBE2D4-202ENST00000415051 CREBZFQ9NS37 354 aa23.53■■□□□ 1.36
UBE2D4-202ENST00000415051 SCN7AQ01118 1682 aa23.53■■□□□ 1.36
UBE2D4-202ENST00000415051 CANXP27824 592 aaKnown RBP23.52■■□□□ 1.36
UBE2D4-202ENST00000415051 EIF5P55010 431 aaKnown RBP23.52■■□□□ 1.36
UBE2D4-202ENST00000415051 DPY19L2Q6NUT2 758 aa23.52■■□□□ 1.36
UBE2D4-202ENST00000415051 BICDL1Q6ZP65 573 aa23.52■■□□□ 1.36
UBE2D4-202ENST00000415051 MKRN1Q9UHC7 482 aaKnown RBP23.52■■□□□ 1.36
UBE2D4-202ENST00000415051 C21orf2O43822 256 aa23.51■■□□□ 1.35
UBE2D4-202ENST00000415051 ERFEQ4G0M1 354 aa23.51■■□□□ 1.35
UBE2D4-202ENST00000415051 TBC1D9BQ66K14 1250 aa23.51■■□□□ 1.35
UBE2D4-202ENST00000415051 CHADLQ6NUI6 762 aa23.51■■□□□ 1.35
UBE2D4-202ENST00000415051 CCDC24Q8N4L8 307 aa23.5■■□□□ 1.35
UBE2D4-202ENST00000415051 ZNF219Q9P2Y4 722 aaPredicted RBP23.5■■□□□ 1.35
UBE2D4-202ENST00000415051 SLX4Q8IY92 1834 aa23.49■■□□□ 1.35
UBE2D4-202ENST00000415051 ZNF622Q969S3 477 aaKnown RBP eCLIP23.49■■□□□ 1.35
UBE2D4-202ENST00000415051 CACNA1SQ13698 1873 aa23.49■■□□□ 1.35
UBE2D4-202ENST00000415051 FOXN1O15353 648 aa23.48■■□□□ 1.35
UBE2D4-202ENST00000415051 MTHFSDQ2M296 383 aaKnown RBP23.48■■□□□ 1.35
UBE2D4-202ENST00000415051 PRR5LQ6MZQ0 368 aa23.48■■□□□ 1.35
UBE2D4-202ENST00000415051 BRIP1Q9BX63 1249 aa23.48■■□□□ 1.35
UBE2D4-202ENST00000415051 LTBP3Q9NS15 1303 aa23.48■■□□□ 1.35
UBE2D4-202ENST00000415051 DDNO94850 711 aaPredicted RBP23.47■■□□□ 1.35
UBE2D4-202ENST00000415051 CNTNAP1P78357 1384 aa23.47■■□□□ 1.35
UBE2D4-202ENST00000415051 ARFGEF2Q9Y6D5 1785 aa23.47■■□□□ 1.35
UBE2D4-202ENST00000415051 HMOX1P09601 288 aa23.46■■□□□ 1.35
UBE2D4-202ENST00000415051 PASKQ96RG2 1323 aa23.46■■□□□ 1.35
UBE2D4-202ENST00000415051 TIMELESSQ9UNS1 1208 aa23.46■■□□□ 1.35
UBE2D4-202ENST00000415051 PDE6BP35913 854 aa23.45■■□□□ 1.34
UBE2D4-202ENST00000415051 HSPA5P11021 654 aaKnown RBP23.44■■□□□ 1.34
UBE2D4-202ENST00000415051 TAOK3Q9H2K8 898 aa23.44■■□□□ 1.34
UBE2D4-202ENST00000415051 PDZRN3Q9UPQ7 1066 aa23.44■■□□□ 1.34
UBE2D4-202ENST00000415051 SIPA1L3O60292 1781 aaPredicted RBP23.43■■□□□ 1.34
UBE2D4-202ENST00000415051 A0A087WZG4 1122 aa23.43■■□□□ 1.34
UBE2D4-202ENST00000415051 SCN4AP35499 1836 aa23.43■■□□□ 1.34
UBE2D4-202ENST00000415051 STARD3NLO95772 234 aa23.42■■□□□ 1.34
UBE2D4-202ENST00000415051 ZNF496Q96IT1 587 aaPredicted RBP23.42■■□□□ 1.34
UBE2D4-202ENST00000415051 PRDM10Q9NQV6 1147 aa23.42■■□□□ 1.34
UBE2D4-202ENST00000415051 TBC1D2BQ9UPU7 963 aa23.42■■□□□ 1.34
UBE2D4-202ENST00000415051 AMER1Q5JTC6 1135 aaPredicted RBP23.41■■□□□ 1.34
UBE2D4-202ENST00000415051 BCORQ6W2J9 1755 aa23.41■■□□□ 1.34
UBE2D4-202ENST00000415051 HEG1Q9ULI3 1381 aa23.4■■□□□ 1.34
UBE2D4-202ENST00000415051 SRGNP10124 158 aa23.4■■□□□ 1.34
UBE2D4-202ENST00000415051 PRPF40BQ6NWY9 871 aaKnown RBP23.4■■□□□ 1.34
UBE2D4-202ENST00000415051 ADAMTSL1Q8N6G6 1762 aa23.4■■□□□ 1.34
UBE2D4-202ENST00000415051 VEGFBP49765 207 aa23.39■■□□□ 1.33
UBE2D4-202ENST00000415051 EIF4G2P78344 907 aaKnown RBP eCLIP23.39■■□□□ 1.33
UBE2D4-202ENST00000415051 STYK1Q6J9G0 422 aa23.39■■□□□ 1.33
UBE2D4-202ENST00000415051 LDHDQ86WU2 507 aa23.39■■□□□ 1.33
UBE2D4-202ENST00000415051 L3MBTL3Q96JM7 780 aaPredicted RBP23.39■■□□□ 1.33
UBE2D4-202ENST00000415051 TAF1DQ9H5J8 278 aaPredicted RBP23.39■■□□□ 1.33
UBE2D4-202ENST00000415051 CAMTA2O94983 1202 aa23.38■■□□□ 1.33
UBE2D4-202ENST00000415051 ITGBL1O95965 494 aaPredicted RBP23.38■■□□□ 1.33
UBE2D4-202ENST00000415051 C7orf43Q8WVR3 580 aa23.38■■□□□ 1.33
UBE2D4-202ENST00000415051 KNSTRNQ9Y448 316 aa23.38■■□□□ 1.33
UBE2D4-202ENST00000415051 IL6STP40189 918 aaPredicted RBP23.37■■□□□ 1.33
UBE2D4-202ENST00000415051 ZNF790Q6PG37 636 aa23.37■■□□□ 1.33
UBE2D4-202ENST00000415051 TTC5Q8N0Z6 440 aa23.37■■□□□ 1.33
UBE2D4-202ENST00000415051 CNBD1Q8NA66 436 aa23.37■■□□□ 1.33
UBE2D4-202ENST00000415051 IL17REQ8NFR9 667 aa23.37■■□□□ 1.33
UBE2D4-202ENST00000415051 CNKSR1Q969H4 720 aa23.37■■□□□ 1.33
UBE2D4-202ENST00000415051 A1BGP04217 495 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms