RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 PDZRN3Q9UPQ7 1066 aa12.39□□□□□ -0.43
TRA2B-204ENST00000414862 WASF2Q9Y6W5 498 aa12.39□□□□□ -0.43
TRA2B-204ENST00000414862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRA2B-204ENST00000414862 RTEL1-TNFRSF6BF6WH68 1400 aa12.38□□□□□ -0.43
TRA2B-204ENST00000414862 J3QL48 77 aa12.38□□□□□ -0.43
TRA2B-204ENST00000414862 NR5A1Q13285 461 aa12.38□□□□□ -0.43
TRA2B-204ENST00000414862 DHX29Q7Z478 1369 aaKnown RBP12.38□□□□□ -0.43
TRA2B-204ENST00000414862 UGGT1Q9NYU2 1555 aa12.38□□□□□ -0.43
TRA2B-204ENST00000414862 RNF17Q9BXT8 1623 aaKnown RBP12.37□□□□□ -0.43
TRA2B-204ENST00000414862 MED14O60244 1454 aa12.37□□□□□ -0.43
TRA2B-204ENST00000414862 SYNMO15061 1565 aa12.37□□□□□ -0.43
TRA2B-204ENST00000414862 DEPDC5O75140 1603 aa12.37□□□□□ -0.43
TRA2B-204ENST00000414862 WASHC2CQ9Y4E1 1318 aa12.37□□□□□ -0.43
TRA2B-204ENST00000414862 KIF3BO15066 747 aa12.36□□□□□ -0.43
TRA2B-204ENST00000414862 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
TRA2B-204ENST00000414862 PPP1R12CQ9BZL4 782 aa12.36□□□□□ -0.43
TRA2B-204ENST00000414862 TFIP11Q9UBB9 837 aaKnown RBP12.36□□□□□ -0.43
TRA2B-204ENST00000414862 ALKQ9UM73 1620 aa12.36□□□□□ -0.43
TRA2B-204ENST00000414862 MBD5Q9P267 1494 aa12.35□□□□□ -0.43
TRA2B-204ENST00000414862 SKIP12755 728 aa12.35□□□□□ -0.43
TRA2B-204ENST00000414862 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
TRA2B-204ENST00000414862 NFATC2IPQ8NCF5 419 aa12.35□□□□□ -0.43
TRA2B-204ENST00000414862 ARID3AQ99856 593 aa12.35□□□□□ -0.43
TRA2B-204ENST00000414862 MIA2Q96PC5 1412 aa12.35□□□□□ -0.43
TRA2B-204ENST00000414862 CCDC141Q6ZP82 1450 aa12.34□□□□□ -0.43
TRA2B-204ENST00000414862 PALM3A6NDB9 673 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-204ENST00000414862 NR3C2P08235 984 aa12.34□□□□□ -0.43
TRA2B-204ENST00000414862 SMPD1P17405 629 aa12.34□□□□□ -0.43
TRA2B-204ENST00000414862 TSGA10IPQ3SY00 556 aa12.34□□□□□ -0.43
TRA2B-204ENST00000414862 CCDC116Q8IYX3 515 aa12.34□□□□□ -0.43
TRA2B-204ENST00000414862 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-204ENST00000414862 CHIC2Q9UKJ5 165 aa12.34□□□□□ -0.43
TRA2B-204ENST00000414862 IQGAP1P46940 1657 aa12.34□□□□□ -0.43
TRA2B-204ENST00000414862 TIAM1Q13009 1591 aa12.34□□□□□ -0.43
TRA2B-204ENST00000414862 ZNF644Q9H582 1327 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-204ENST00000414862 EHBP1L1Q8N3D4 1523 aa12.33□□□□□ -0.44
TRA2B-204ENST00000414862 LRRC7Q96NW7 1537 aa12.33□□□□□ -0.44
TRA2B-204ENST00000414862 ERVH48-1M5A8F1 160 aa12.33□□□□□ -0.44
TRA2B-204ENST00000414862 ATP9BO43861 1147 aa12.33□□□□□ -0.44
TRA2B-204ENST00000414862 DHX9Q08211 1270 aaKnown RBP12.33□□□□□ -0.44
TRA2B-204ENST00000414862 NNTQ13423 1086 aa12.33□□□□□ -0.44
TRA2B-204ENST00000414862 PLPP7Q8NBV4 271 aa12.33□□□□□ -0.44
TRA2B-204ENST00000414862 PCDHB11Q9Y5F2 797 aa12.32□□□□□ -0.44
TRA2B-204ENST00000414862 MAP7D1Q3KQU3 841 aa12.31□□□□□ -0.44
TRA2B-204ENST00000414862 DOLKQ9UPQ8 538 aa12.31□□□□□ -0.44
TRA2B-204ENST00000414862 GFRA3O60609 400 aa12.3□□□□□ -0.44
TRA2B-204ENST00000414862 PPP1R26Q5T8A7 1209 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-204ENST00000414862 MAFBQ9Y5Q3 323 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-204ENST00000414862 CEP162Q5TB80 1403 aa12.29□□□□□ -0.44
TRA2B-204ENST00000414862 USP17L5A8MUK1 530 aa12.29□□□□□ -0.44
TRA2B-204ENST00000414862 LMOD1P29536 600 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-204ENST00000414862 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
TRA2B-204ENST00000414862 TRAF7Q6Q0C0 670 aa12.29□□□□□ -0.44
TRA2B-204ENST00000414862 CDCA7Q9BWT1 371 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-204ENST00000414862 TMPRSS4Q9NRS4 437 aa12.29□□□□□ -0.44
TRA2B-204ENST00000414862 CAMSAP2Q08AD1 1489 aa12.28□□□□□ -0.44
TRA2B-204ENST00000414862 DEPDC4Q8N2C3 294 aa12.28□□□□□ -0.44
TRA2B-204ENST00000414862 EMILIN1Q9Y6C2 1016 aa12.28□□□□□ -0.44
TRA2B-204ENST00000414862 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.44
TRA2B-204ENST00000414862 USP17L3A6NCW0 530 aa12.27□□□□□ -0.45
TRA2B-204ENST00000414862 USP17L4A6NCW7 530 aa12.27□□□□□ -0.45
TRA2B-204ENST00000414862 RFX1P22670 979 aa12.27□□□□□ -0.45
TRA2B-204ENST00000414862 OXLD1Q5BKU9 147 aa12.27□□□□□ -0.45
TRA2B-204ENST00000414862 USP17L2Q6R6M4 530 aa12.27□□□□□ -0.45
TRA2B-204ENST00000414862 USP17L1Q7RTZ2 530 aa12.27□□□□□ -0.45
TRA2B-204ENST00000414862 HPS1Q92902 700 aa12.27□□□□□ -0.45
TRA2B-204ENST00000414862 PGPEP1Q9NXJ5 209 aa12.27□□□□□ -0.45
TRA2B-204ENST00000414862 ERVK-7P63135 1459 aa12.27□□□□□ -0.45
TRA2B-204ENST00000414862 FAM187AA6NFU0 413 aa12.26□□□□□ -0.45
TRA2B-204ENST00000414862 LZTS3O60299 673 aaPredicted RBP12.26□□□□□ -0.45
TRA2B-204ENST00000414862 NCOA4Q13772 614 aa12.26□□□□□ -0.45
TRA2B-204ENST00000414862 PLEKHM2Q8IWE5 1019 aa12.26□□□□□ -0.45
TRA2B-204ENST00000414862 RGS17Q9UGC6 210 aaPredicted RBP12.26□□□□□ -0.45
TRA2B-204ENST00000414862 ABCC3O15438 1527 aa12.26□□□□□ -0.45
TRA2B-204ENST00000414862 ZC3H13Q5T200 1668 aaKnown RBP12.26□□□□□ -0.45
TRA2B-204ENST00000414862 NRG2O14511 850 aaPredicted RBP12.25□□□□□ -0.45
TRA2B-204ENST00000414862 WDR4P57081 412 aaKnown RBP12.25□□□□□ -0.45
TRA2B-204ENST00000414862 EML3Q32P44 896 aa12.25□□□□□ -0.45
TRA2B-204ENST00000414862 ZNF784Q8NCA9 323 aaPredicted RBP12.25□□□□□ -0.45
TRA2B-204ENST00000414862 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
TRA2B-204ENST00000414862 STRCP1A6NGW2 1772 aa12.24□□□□□ -0.45
TRA2B-204ENST00000414862 TSPY4P0CV99 314 aa12.24□□□□□ -0.45
TRA2B-204ENST00000414862 TSPY10P0CW01 314 aa12.24□□□□□ -0.45
TRA2B-204ENST00000414862 USP4Q13107 963 aa12.24□□□□□ -0.45
TRA2B-204ENST00000414862 KLF16Q9BXK1 252 aaPredicted RBP12.24□□□□□ -0.45
TRA2B-204ENST00000414862 CYLDQ9NQC7 956 aa12.24□□□□□ -0.45
TRA2B-204ENST00000414862 ZIC2O95409 532 aaPredicted RBP12.23□□□□□ -0.45
TRA2B-204ENST00000414862 SCTRP47872 440 aa12.23□□□□□ -0.45
TRA2B-204ENST00000414862 MYT1Q01538 1121 aa12.23□□□□□ -0.45
TRA2B-204ENST00000414862 ITPKCQ96DU7 683 aa12.23□□□□□ -0.45
TRA2B-204ENST00000414862 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
TRA2B-204ENST00000414862 NCOA2Q15596 1464 aa12.22□□□□□ -0.45
TRA2B-204ENST00000414862 FAM135BQ49AJ0 1406 aa12.22□□□□□ -0.45
TRA2B-204ENST00000414862 ERVK-9P63128 1117 aa12.22□□□□□ -0.45
TRA2B-204ENST00000414862 LAPTM4AQ15012 233 aa12.22□□□□□ -0.45
TRA2B-204ENST00000414862 CC2D2BQ6DHV5 1058 aa12.22□□□□□ -0.45
TRA2B-204ENST00000414862 SIRT1Q96EB6 747 aa12.22□□□□□ -0.45
TRA2B-204ENST00000414862 LILRA1O75019 489 aa12.21□□□□□ -0.45
TRA2B-204ENST00000414862 MYCP01106 439 aaPredicted RBP12.21□□□□□ -0.45
TRA2B-204ENST00000414862 TIMP2P16035 220 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms