RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 HOOK3Q86VS8 718 aa12.35□□□□□ -0.43
SCN5A-204ENST00000414099 NAPBQ9H115 298 aa12.35□□□□□ -0.43
SCN5A-204ENST00000414099 TTC21BQ7Z4L5 1316 aa12.35□□□□□ -0.43
SCN5A-204ENST00000414099 CETN1Q12798 172 aa12.35□□□□□ -0.43
SCN5A-204ENST00000414099 TAF7Q15545 349 aaPredicted RBP12.35□□□□□ -0.43
SCN5A-204ENST00000414099 SLC12A5Q9H2X9 1139 aa12.35□□□□□ -0.43
SCN5A-204ENST00000414099 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
SCN5A-204ENST00000414099 KIF5CO60282 957 aa12.35□□□□□ -0.43
SCN5A-204ENST00000414099 BAG3O95817 575 aa12.35□□□□□ -0.43
SCN5A-204ENST00000414099 MVPQ14764 893 aaKnown RBP12.35□□□□□ -0.43
SCN5A-204ENST00000414099 STXBP4Q6ZWJ1 553 aa12.35□□□□□ -0.43
SCN5A-204ENST00000414099 PDRG1Q9NUG6 133 aa12.35□□□□□ -0.43
SCN5A-204ENST00000414099 CTCFLQ8NI51 663 aaPredicted RBP12.35□□□□□ -0.43
SCN5A-204ENST00000414099 NAA15Q9BXJ9 866 aaKnown RBP12.35□□□□□ -0.43
SCN5A-204ENST00000414099 NSD3Q9BZ95 1437 aa12.35□□□□□ -0.43
SCN5A-204ENST00000414099 EXOC5O00471 708 aa12.34□□□□□ -0.43
SCN5A-204ENST00000414099 KDM4AO75164 1064 aa12.34□□□□□ -0.43
SCN5A-204ENST00000414099 BAG4O95429 457 aaKnown RBP12.34□□□□□ -0.43
SCN5A-204ENST00000414099 LDHCP07864 332 aa12.34□□□□□ -0.43
SCN5A-204ENST00000414099 SREK1Q8WXA9 508 aaKnown RBP12.34□□□□□ -0.43
SCN5A-204ENST00000414099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.34□□□□□ -0.43
SCN5A-204ENST00000414099 TMCO3Q6UWJ1 677 aa12.34□□□□□ -0.43
SCN5A-204ENST00000414099 NESP48681 1621 aa12.34□□□□□ -0.43
SCN5A-204ENST00000414099 CAMSAP2Q08AD1 1489 aa12.34□□□□□ -0.43
SCN5A-204ENST00000414099 BICDL1Q6ZP65 573 aa12.34□□□□□ -0.43
SCN5A-204ENST00000414099 SSR1P43307 286 aaKnown RBP12.34□□□□□ -0.43
SCN5A-204ENST00000414099 CHD1LQ86WJ1 897 aa12.34□□□□□ -0.43
SCN5A-204ENST00000414099 CTAGE5O15320 804 aa12.34□□□□□ -0.43
SCN5A-204ENST00000414099 FAM193AP78312 1265 aa12.34□□□□□ -0.43
SCN5A-204ENST00000414099 USO1O60763 962 aaKnown RBP12.33□□□□□ -0.44
SCN5A-204ENST00000414099 CADPS2Q86UW7 1296 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 CEBPZQ03701 1054 aaKnown RBP12.33□□□□□ -0.44
SCN5A-204ENST00000414099 UBXN4Q92575 508 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 MSH6P52701 1360 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 PABPN1LA6NDY0 278 aaKnown RBP12.33□□□□□ -0.44
SCN5A-204ENST00000414099 FERP16591 822 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 PPP1R42Q7Z4L9 355 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 UQCRHLA0A096LP55 91 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 RAPGEF3O95398 923 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 HLA-DOAP06340 250 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 UQCRHP07919 91 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 KIF5BP33176 963 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 GSTO1P78417 241 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
SCN5A-204ENST00000414099 ZGPATQ8N5A5 531 aaKnown RBP12.33□□□□□ -0.44
SCN5A-204ENST00000414099 NSD2O96028 1365 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 HOMER2Q9NSB8 354 aa12.33□□□□□ -0.44
SCN5A-204ENST00000414099 C6orf163Q5TEZ5 329 aa12.32□□□□□ -0.44
SCN5A-204ENST00000414099 NEMFO60524 1076 aa12.32□□□□□ -0.44
SCN5A-204ENST00000414099 RRP9O43818 475 aaKnown RBP12.32□□□□□ -0.44
SCN5A-204ENST00000414099 TSNARE1Q96NA8 513 aa12.32□□□□□ -0.44
SCN5A-204ENST00000414099 GRPEL1Q9HAV7 217 aa12.32□□□□□ -0.44
SCN5A-204ENST00000414099 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCN5A-204ENST00000414099 V9GYY5 206 aaPredicted RBP12.32□□□□□ -0.44
SCN5A-204ENST00000414099 CATIPQ7Z7H3 387 aa12.32□□□□□ -0.44
SCN5A-204ENST00000414099 ZC3H6P61129 1189 aaKnown RBP12.32□□□□□ -0.44
SCN5A-204ENST00000414099 GOLGA6L9A6NEM1 432 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 B4DLN1 442 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 MRPL12P52815 198 aaKnown RBP12.31□□□□□ -0.44
SCN5A-204ENST00000414099 IFFO1Q0D2I5 559 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 ALDH1L2Q3SY69 923 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 CCDC178Q5BJE1 867 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 FILIP1Q7Z7B0 1213 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 ANO10Q9NW15 660 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 STK3Q13188 491 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
SCN5A-204ENST00000414099 CGNQ9P2M7 1197 aaKnown RBP12.31□□□□□ -0.44
SCN5A-204ENST00000414099 PCF11O94913 1555 aaKnown RBP12.31□□□□□ -0.44
SCN5A-204ENST00000414099 FERMT2Q96AC1 680 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 ARHGEF11O15085 1522 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 BBXQ8WY36 941 aaPredicted RBP12.31□□□□□ -0.44
SCN5A-204ENST00000414099 AMPD3Q01432 767 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 ALS2CR12Q96Q35 445 aa12.31□□□□□ -0.44
SCN5A-204ENST00000414099 FAM114A1Q8IWE2 563 aa12.3□□□□□ -0.44
SCN5A-204ENST00000414099 PTPRCP08575 1304 aa12.3□□□□□ -0.44
SCN5A-204ENST00000414099 PDE4BQ07343 736 aa12.3□□□□□ -0.44
SCN5A-204ENST00000414099 LRRC27Q9C0I9 530 aa12.3□□□□□ -0.44
SCN5A-204ENST00000414099 PAFAH1B1P43034 410 aa12.3□□□□□ -0.44
SCN5A-204ENST00000414099 RRS1Q15050 365 aaKnown RBP12.3□□□□□ -0.44
SCN5A-204ENST00000414099 IFI16Q16666 785 aaKnown RBP12.3□□□□□ -0.44
SCN5A-204ENST00000414099 SPECC1LQ69YQ0 1117 aa12.3□□□□□ -0.44
SCN5A-204ENST00000414099 CWC27Q6UX04 472 aaKnown RBP12.3□□□□□ -0.44
SCN5A-204ENST00000414099 JAKMIP1Q96N16 626 aaKnown RBP12.3□□□□□ -0.44
SCN5A-204ENST00000414099 C1orf115Q9H7X2 142 aa12.3□□□□□ -0.44
SCN5A-204ENST00000414099 LUZP1Q86V48 1076 aa12.3□□□□□ -0.44
SCN5A-204ENST00000414099 CABP5Q9NP86 173 aa12.3□□□□□ -0.44
SCN5A-204ENST00000414099 DENND4BO75064 1496 aaPredicted RBP12.3□□□□□ -0.44
SCN5A-204ENST00000414099 CACNA2D4Q7Z3S7 1137 aa12.3□□□□□ -0.44
SCN5A-204ENST00000414099 DDX23Q9BUQ8 820 aaKnown RBP12.3□□□□□ -0.44
SCN5A-204ENST00000414099 EIF2AK4Q9P2K8 1649 aaKnown RBP12.3□□□□□ -0.44
SCN5A-204ENST00000414099 SH2B1Q9NRF2 756 aaPredicted RBP12.3□□□□□ -0.44
SCN5A-204ENST00000414099 RFC4P35249 363 aa12.29□□□□□ -0.44
SCN5A-204ENST00000414099 ABCA10Q8WWZ4 1543 aa12.29□□□□□ -0.44
SCN5A-204ENST00000414099 KIF18AQ8NI77 898 aa12.29□□□□□ -0.44
SCN5A-204ENST00000414099 GSTTP1A0A1W2PQM5 241 aa12.29□□□□□ -0.44
SCN5A-204ENST00000414099 MINDY4BA8MYZ0 360 aa12.29□□□□□ -0.44
SCN5A-204ENST00000414099 CFAP100Q494V2 611 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms