RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 CD163L1Q9NR16 1453 aa13.31□□□□□ -0.28
HCG27-202ENST00000414008 ZNF772Q68DY9 489 aaPredicted RBP13.31□□□□□ -0.28
HCG27-202ENST00000414008 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.31□□□□□ -0.28
HCG27-202ENST00000414008 MTRQ99707 1265 aa13.31□□□□□ -0.28
HCG27-202ENST00000414008 IL21Q9HBE4 155 aa13.31□□□□□ -0.28
HCG27-202ENST00000414008 AFF2P51816 1311 aa13.31□□□□□ -0.28
HCG27-202ENST00000414008 ALS2Q96Q42 1657 aa13.31□□□□□ -0.28
HCG27-202ENST00000414008 IFFO2Q5TF58 517 aa13.3□□□□□ -0.28
HCG27-202ENST00000414008 FNBP4Q8N3X1 1017 aaPredicted RBP13.3□□□□□ -0.28
HCG27-202ENST00000414008 TMUB1Q9BVT8 246 aa13.3□□□□□ -0.28
HCG27-202ENST00000414008 FAM217BQ9NTX9 383 aaPredicted RBP13.3□□□□□ -0.28
HCG27-202ENST00000414008 A0A1W2PP64 1363 aa13.3□□□□□ -0.28
HCG27-202ENST00000414008 ANKRD36BQ8N2N9 1353 aa13.3□□□□□ -0.28
HCG27-202ENST00000414008 C11orf95C9JLR9 678 aaPredicted RBP13.29□□□□□ -0.28
HCG27-202ENST00000414008 CD46P15529 392 aa13.29□□□□□ -0.28
HCG27-202ENST00000414008 GCGRP47871 477 aa13.29□□□□□ -0.28
HCG27-202ENST00000414008 TJAP1Q5JTD0 557 aa13.29□□□□□ -0.28
HCG27-202ENST00000414008 FAM83GA6ND36 823 aa13.28□□□□□ -0.28
HCG27-202ENST00000414008 GCP02774 474 aa13.28□□□□□ -0.28
HCG27-202ENST00000414008 COPS2P61201 443 aa13.28□□□□□ -0.28
HCG27-202ENST00000414008 POTEAQ6S8J7 498 aa13.28□□□□□ -0.28
HCG27-202ENST00000414008 USP21Q9UK80 565 aa13.28□□□□□ -0.28
HCG27-202ENST00000414008 USP19O94966 1318 aa13.28□□□□□ -0.28
HCG27-202ENST00000414008 EDC4Q6P2E9 1401 aaKnown RBP13.28□□□□□ -0.28
HCG27-202ENST00000414008 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.29
HCG27-202ENST00000414008 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
HCG27-202ENST00000414008 NME9Q86XW9 330 aa13.27□□□□□ -0.29
HCG27-202ENST00000414008 REPIN1Q9BWE0 567 aaKnown RBP13.27□□□□□ -0.29
HCG27-202ENST00000414008 AKAP12Q02952 1782 aa13.27□□□□□ -0.29
HCG27-202ENST00000414008 SSTR3P32745 418 aaPredicted RBP13.26□□□□□ -0.29
HCG27-202ENST00000414008 PDE4DQ08499 809 aa13.26□□□□□ -0.29
HCG27-202ENST00000414008 GIGYF2Q6Y7W6 1299 aaKnown RBP13.26□□□□□ -0.29
HCG27-202ENST00000414008 QTRT2Q9H974 415 aaKnown RBP13.26□□□□□ -0.29
HCG27-202ENST00000414008 PRDM11Q9NQV5 511 aa13.26□□□□□ -0.29
HCG27-202ENST00000414008 KCNH5Q8NCM2 988 aa13.25□□□□□ -0.29
HCG27-202ENST00000414008 CARD14Q9BXL6 1004 aa13.25□□□□□ -0.29
HCG27-202ENST00000414008 USP31Q70CQ4 1352 aa13.24□□□□□ -0.29
HCG27-202ENST00000414008 KIAA0232Q92628 1395 aa13.24□□□□□ -0.29
HCG27-202ENST00000414008 GRIPAP1Q4V328 841 aa13.24□□□□□ -0.29
HCG27-202ENST00000414008 BLOC1S3Q6QNY0 202 aa13.24□□□□□ -0.29
HCG27-202ENST00000414008 ILDR2Q71H61 639 aa13.24□□□□□ -0.29
HCG27-202ENST00000414008 UNC5CLQ8IV45 518 aa13.24□□□□□ -0.29
HCG27-202ENST00000414008 PARP9Q8IXQ6 854 aa13.24□□□□□ -0.29
HCG27-202ENST00000414008 TRPC5Q9UL62 973 aaPredicted RBP13.24□□□□□ -0.29
HCG27-202ENST00000414008 MON2Q7Z3U7 1717 aa13.24□□□□□ -0.29
HCG27-202ENST00000414008 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
HCG27-202ENST00000414008 NR1I2O75469 434 aa13.23□□□□□ -0.29
HCG27-202ENST00000414008 RXRBP28702 533 aa13.23□□□□□ -0.29
HCG27-202ENST00000414008 ATP6V1AP38606 617 aa13.23□□□□□ -0.29
HCG27-202ENST00000414008 FUT2Q10981 343 aa13.23□□□□□ -0.29
HCG27-202ENST00000414008 CHRNA2Q15822 529 aa13.23□□□□□ -0.29
HCG27-202ENST00000414008 BTG4Q9NY30 223 aa13.23□□□□□ -0.29
HCG27-202ENST00000414008 NRKQ7Z2Y5 1582 aa13.23□□□□□ -0.29
HCG27-202ENST00000414008 SLIT2O94813 1529 aa13.23□□□□□ -0.29
HCG27-202ENST00000414008 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
HCG27-202ENST00000414008 ABCA3Q99758 1704 aa13.22□□□□□ -0.29
HCG27-202ENST00000414008 CPDO75976 1380 aa13.22□□□□□ -0.29
HCG27-202ENST00000414008 PIK3C2AO00443 1686 aa13.22□□□□□ -0.29
HCG27-202ENST00000414008 FYB1O15117 783 aa13.22□□□□□ -0.29
HCG27-202ENST00000414008 COG3Q96JB2 828 aa13.22□□□□□ -0.29
HCG27-202ENST00000414008 PANK3Q9H999 370 aa13.22□□□□□ -0.29
HCG27-202ENST00000414008 ZBTB7CA1YPR0 619 aa13.21□□□□□ -0.29
HCG27-202ENST00000414008 KDM4AO75164 1064 aa13.21□□□□□ -0.29
HCG27-202ENST00000414008 ZPR1O75312 459 aa13.21□□□□□ -0.29
HCG27-202ENST00000414008 RBM6P78332 1123 aaKnown RBP13.21□□□□□ -0.29
HCG27-202ENST00000414008 ZNF516Q92618 1163 aa13.21□□□□□ -0.29
HCG27-202ENST00000414008 MARF1Q9Y4F3 1742 aaKnown RBP13.21□□□□□ -0.3
HCG27-202ENST00000414008 CRYBG1Q9Y4K1 1723 aa13.21□□□□□ -0.3
HCG27-202ENST00000414008 SLIT3O75094 1523 aa13.2□□□□□ -0.3
HCG27-202ENST00000414008 PUS10Q3MIT2 529 aaKnown RBP13.2□□□□□ -0.3
HCG27-202ENST00000414008 ARHGEF25Q86VW2 580 aa13.2□□□□□ -0.3
HCG27-202ENST00000414008 GGNBP2Q9H3C7 697 aa13.2□□□□□ -0.3
HCG27-202ENST00000414008 NSD3Q9BZ95 1437 aa13.2□□□□□ -0.3
HCG27-202ENST00000414008 PHRF1Q9P1Y6 1649 aaKnown RBP13.2□□□□□ -0.3
HCG27-202ENST00000414008 CCDC7Q96M83 1385 aa13.2□□□□□ -0.3
HCG27-202ENST00000414008 WASHC2AQ641Q2 1341 aa13.19□□□□□ -0.3
HCG27-202ENST00000414008 MYOM1P52179 1685 aa13.19□□□□□ -0.3
HCG27-202ENST00000414008 EVA1CP58658 441 aa13.19□□□□□ -0.3
HCG27-202ENST00000414008 USP46P62068 366 aa13.19□□□□□ -0.3
HCG27-202ENST00000414008 VPS72Q15906 364 aa13.19□□□□□ -0.3
HCG27-202ENST00000414008 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
HCG27-202ENST00000414008 GJD4Q96KN9 370 aaPredicted RBP13.19□□□□□ -0.3
HCG27-202ENST00000414008 CCDC9Q9Y3X0 531 aaKnown RBP13.19□□□□□ -0.3
HCG27-202ENST00000414008 ATRNO75882 1429 aa13.19□□□□□ -0.3
HCG27-202ENST00000414008 CGNL1Q0VF96 1302 aa13.18□□□□□ -0.3
HCG27-202ENST00000414008 SCUBE3Q8IX30 993 aa13.18□□□□□ -0.3
HCG27-202ENST00000414008 OVOS2A0A0J9YW53 1432 aa13.18□□□□□ -0.3
HCG27-202ENST00000414008 OVOS2Q6IE36 1432 aa13.18□□□□□ -0.3
HCG27-202ENST00000414008 AATKQ6ZMQ8 1374 aa13.18□□□□□ -0.3
HCG27-202ENST00000414008 COL14A1Q05707 1796 aaKnown RBP13.17□□□□□ -0.3
HCG27-202ENST00000414008 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
HCG27-202ENST00000414008 MORN1Q5T089 497 aa13.16□□□□□ -0.3
HCG27-202ENST00000414008 KNSTRNQ9Y448 316 aa13.16□□□□□ -0.3
HCG27-202ENST00000414008 A0A0G2JS52 829 aa13.15□□□□□ -0.3
HCG27-202ENST00000414008 BEGAINQ9BUH8 593 aa13.15□□□□□ -0.3
HCG27-202ENST00000414008 NWD2Q9ULI1 1742 aa13.15□□□□□ -0.3
HCG27-202ENST00000414008 PLCH1Q4KWH8 1693 aa13.15□□□□□ -0.31
HCG27-202ENST00000414008 NFAT5O94916 1531 aa13.14□□□□□ -0.31
HCG27-202ENST00000414008 FBLN1P23142 703 aa13.14□□□□□ -0.31
HCG27-202ENST00000414008 USP54Q70EL1 1684 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms