RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 TEX13AQ9BXU3 409 aaPredicted RBP22.37■■□□□ 1.17
COL6A2-205ENST00000413758 BCS1LQ9Y276 419 aa22.37■■□□□ 1.17
COL6A2-205ENST00000413758 UBR2Q8IWV8 1755 aa22.37■■□□□ 1.17
COL6A2-205ENST00000413758 HEG1Q9ULI3 1381 aa22.37■■□□□ 1.17
COL6A2-205ENST00000413758 N4BP2Q86UW6 1770 aaPredicted RBP22.36■■□□□ 1.17
COL6A2-205ENST00000413758 DPEP1P16444 411 aa22.36■■□□□ 1.17
COL6A2-205ENST00000413758 DDR1Q08345 913 aa22.36■■□□□ 1.17
COL6A2-205ENST00000413758 MCM10Q7L590 875 aa22.36■■□□□ 1.17
COL6A2-205ENST00000413758 NARFQ9UHQ1 456 aa22.36■■□□□ 1.17
COL6A2-205ENST00000413758 UTRNP46939 3433 aa22.35■■□□□ 1.17
COL6A2-205ENST00000413758 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
COL6A2-205ENST00000413758 KIF13BQ9NQT8 1826 aa22.35■■□□□ 1.17
COL6A2-205ENST00000413758 CEMIPQ8WUJ3 1361 aa22.35■■□□□ 1.17
COL6A2-205ENST00000413758 SIPA1L3O60292 1781 aaPredicted RBP22.34■■□□□ 1.17
COL6A2-205ENST00000413758 A0A087WZG4 1122 aa22.33■■□□□ 1.17
COL6A2-205ENST00000413758 KCNQ3O43525 872 aa22.33■■□□□ 1.17
COL6A2-205ENST00000413758 DCTN1Q14203 1278 aa22.33■■□□□ 1.17
COL6A2-205ENST00000413758 POLRMTO00411 1230 aaKnown RBP22.32■■□□□ 1.16
COL6A2-205ENST00000413758 GIGYF1O75420 1035 aaPredicted RBP22.32■■□□□ 1.16
COL6A2-205ENST00000413758 TM4SF1P30408 202 aa22.32■■□□□ 1.16
COL6A2-205ENST00000413758 DDX10Q13206 875 aaKnown RBP22.31■■□□□ 1.16
COL6A2-205ENST00000413758 NFIXQ14938 502 aa22.31■■□□□ 1.16
COL6A2-205ENST00000413758 ATP10DQ9P241 1426 aa22.31■■□□□ 1.16
COL6A2-205ENST00000413758 BICDL1Q6ZP65 573 aa22.3■■□□□ 1.16
COL6A2-205ENST00000413758 ARHGAP27Q6ZUM4 889 aa22.3■■□□□ 1.16
COL6A2-205ENST00000413758 ZNF526Q8TF50 670 aaPredicted RBP22.3■■□□□ 1.16
COL6A2-205ENST00000413758 GOLGB1Q14789 3259 aaKnown RBP22.3■■□□□ 1.16
COL6A2-205ENST00000413758 KIAA1551Q9HCM1 1747 aa22.3■■□□□ 1.16
COL6A2-205ENST00000413758 HTATSF1O43719 755 aaKnown RBP22.29■■□□□ 1.16
COL6A2-205ENST00000413758 A1BGP04217 495 aa22.29■■□□□ 1.16
COL6A2-205ENST00000413758 EIF5P55010 431 aaKnown RBP22.29■■□□□ 1.16
COL6A2-205ENST00000413758 PIM2Q9P1W9 311 aa22.29■■□□□ 1.16
COL6A2-205ENST00000413758 PNNQ9H307 717 aaKnown RBP22.28■■□□□ 1.16
COL6A2-205ENST00000413758 BCL2L12Q9HB09 334 aa22.28■■□□□ 1.16
COL6A2-205ENST00000413758 TBC1D2BQ9UPU7 963 aa22.28■■□□□ 1.16
COL6A2-205ENST00000413758 MAPK8IP3Q9UPT6 1336 aa22.28■■□□□ 1.16
COL6A2-205ENST00000413758 SERPINB2P05120 415 aa22.27■■□□□ 1.16
COL6A2-205ENST00000413758 CHRNA5P30532 468 aa22.27■■□□□ 1.16
COL6A2-205ENST00000413758 IL6STP40189 918 aaPredicted RBP22.27■■□□□ 1.16
COL6A2-205ENST00000413758 C1QTNF8P60827 252 aa22.27■■□□□ 1.16
COL6A2-205ENST00000413758 RALBP1Q15311 655 aa22.27■■□□□ 1.16
COL6A2-205ENST00000413758 DALRD3Q5D0E6 543 aaKnown RBP22.27■■□□□ 1.16
COL6A2-205ENST00000413758 GPBP1L1Q9HC44 474 aaPredicted RBP22.27■■□□□ 1.16
COL6A2-205ENST00000413758 TAF7Q15545 349 aaPredicted RBP22.26■■□□□ 1.15
COL6A2-205ENST00000413758 SNRPA1P09661 255 aaKnown RBP22.25■■□□□ 1.15
COL6A2-205ENST00000413758 KCNA3P22001 575 aa22.25■■□□□ 1.15
COL6A2-205ENST00000413758 USP16Q9Y5T5 823 aa22.25■■□□□ 1.15
COL6A2-205ENST00000413758 PIP4K2AP48426 406 aaPredicted RBP22.24■■□□□ 1.15
COL6A2-205ENST00000413758 MIS18AQ9NYP9 233 aa22.24■■□□□ 1.15
COL6A2-205ENST00000413758 PRAMEF22A3QJZ6 481 aa22.23■■□□□ 1.15
COL6A2-205ENST00000413758 NFE2L2Q16236 605 aa22.23■■□□□ 1.15
COL6A2-205ENST00000413758 NPHP1O15259 732 aa22.22■■□□□ 1.15
COL6A2-205ENST00000413758 TBC1D9BQ66K14 1250 aa22.22■■□□□ 1.15
COL6A2-205ENST00000413758 PLEKHF1Q96S99 279 aa22.22■■□□□ 1.15
COL6A2-205ENST00000413758 ADCY9O60503 1353 aa22.22■■□□□ 1.15
COL6A2-205ENST00000413758 AFDNP55196 1824 aaKnown RBP22.22■■□□□ 1.15
COL6A2-205ENST00000413758 SENP3-EIF4A1A0A087X0R7 540 aa22.21■■□□□ 1.15
COL6A2-205ENST00000413758 DZIP3Q86Y13 1208 aaKnown RBP22.21■■□□□ 1.15
COL6A2-205ENST00000413758 BRCA1P38398 1863 aaKnown RBP22.2■■□□□ 1.14
COL6A2-205ENST00000413758 C2CD5Q86YS7 1000 aa22.2■■□□□ 1.14
COL6A2-205ENST00000413758 PNISRQ8TF01 805 aaKnown RBP22.2■■□□□ 1.14
COL6A2-205ENST00000413758 DLG5Q8TDM6 1919 aa22.19■■□□□ 1.14
COL6A2-205ENST00000413758 SETDB2Q96T68 719 aa22.19■■□□□ 1.14
COL6A2-205ENST00000413758 THUMPD2Q9BTF0 503 aaKnown RBP22.19■■□□□ 1.14
COL6A2-205ENST00000413758 SCN7AQ01118 1682 aa22.18■■□□□ 1.14
COL6A2-205ENST00000413758 MYBBP1AQ9BQG0 1328 aaKnown RBP22.18■■□□□ 1.14
COL6A2-205ENST00000413758 H0YIN7 160 aa22.18■■□□□ 1.14
COL6A2-205ENST00000413758 CAMTA2O94983 1202 aa22.18■■□□□ 1.14
COL6A2-205ENST00000413758 CARMIL3Q8ND23 1372 aa22.17■■□□□ 1.14
COL6A2-205ENST00000413758 CCDC24Q8N4L8 307 aa22.17■■□□□ 1.14
COL6A2-205ENST00000413758 ARFGEF1Q9Y6D6 1849 aa22.17■■□□□ 1.14
COL6A2-205ENST00000413758 NRXN2Q9P2S2 1712 aa22.17■■□□□ 1.14
COL6A2-205ENST00000413758 C9orf131Q5VYM1 1079 aa22.16■■□□□ 1.14
COL6A2-205ENST00000413758 ZNF652Q9Y2D9 606 aa22.15■■□□□ 1.14
COL6A2-205ENST00000413758 RIPK4P57078 832 aa22.14■■□□□ 1.13
COL6A2-205ENST00000413758 TTLL6Q8N841 843 aa22.14■■□□□ 1.13
COL6A2-205ENST00000413758 CNBD1Q8NA66 436 aa22.14■■□□□ 1.13
COL6A2-205ENST00000413758 ZNF622Q969S3 477 aaKnown RBP eCLIP22.14■■□□□ 1.13
COL6A2-205ENST00000413758 PDE6BP35913 854 aa22.13■■□□□ 1.13
COL6A2-205ENST00000413758 ST5P78524 1137 aa22.13■■□□□ 1.13
COL6A2-205ENST00000413758 WDR43Q15061 677 aaKnown RBP eCLIP22.13■■□□□ 1.13
COL6A2-205ENST00000413758 PRR5LQ6MZQ0 368 aa22.13■■□□□ 1.13
COL6A2-205ENST00000413758 NGEFQ8N5V2 710 aa22.13■■□□□ 1.13
COL6A2-205ENST00000413758 RNF181Q9P0P0 153 aa22.13■■□□□ 1.13
COL6A2-205ENST00000413758 NBPF26B4DH59 902 aa22.12■■□□□ 1.13
COL6A2-205ENST00000413758 NBPF10Q6P3W6 841 aaKnown RBP22.12■■□□□ 1.13
COL6A2-205ENST00000413758 NBPF15Q8N660 670 aa22.12■■□□□ 1.13
COL6A2-205ENST00000413758 BRIP1Q9BX63 1249 aa22.12■■□□□ 1.13
COL6A2-205ENST00000413758 EIF4A1P60842 406 aaKnown RBP22.11■■□□□ 1.13
COL6A2-205ENST00000413758 NBPF5PQ86XG9 351 aaPredicted RBP22.11■■□□□ 1.13
COL6A2-205ENST00000413758 CCDC146Q8IYE0 955 aa22.11■■□□□ 1.13
COL6A2-205ENST00000413758 TSPYL4Q9UJ04 414 aa22.11■■□□□ 1.13
COL6A2-205ENST00000413758 BCORQ6W2J9 1755 aa22.1■■□□□ 1.13
COL6A2-205ENST00000413758 LMOD3Q0VAK6 560 aa22.1■■□□□ 1.13
COL6A2-205ENST00000413758 NEUROD2Q15784 382 aa22.1■■□□□ 1.13
COL6A2-205ENST00000413758 CLEC4GQ6UXB4 293 aa22.1■■□□□ 1.13
COL6A2-205ENST00000413758 ZNF219Q9P2Y4 722 aaPredicted RBP22.1■■□□□ 1.13
COL6A2-205ENST00000413758 PDZRN3Q9UPQ7 1066 aa22.1■■□□□ 1.13
COL6A2-205ENST00000413758 RRP7AQ9Y3A4 280 aaKnown RBP22.1■■□□□ 1.13
COL6A2-205ENST00000413758 KDM3BQ7LBC6 1761 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms