RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
RFFL-203ENST00000413582 PRELPP51888 382 aa13.16□□□□□ -0.3
RFFL-203ENST00000413582 C1orf141Q5JVX7 400 aa13.16□□□□□ -0.3
RFFL-203ENST00000413582 NFATC2IPQ8NCF5 419 aa13.16□□□□□ -0.3
RFFL-203ENST00000413582 USPL1Q5W0Q7 1092 aa13.15□□□□□ -0.3
RFFL-203ENST00000413582 GLTPD2A6NH11 291 aa13.14□□□□□ -0.31
RFFL-203ENST00000413582 HSPA1AP0DMV8 641 aaKnown RBP13.14□□□□□ -0.31
RFFL-203ENST00000413582 HSPA1BP0DMV9 641 aaKnown RBP13.14□□□□□ -0.31
RFFL-203ENST00000413582 LMNB1P20700 586 aa13.14□□□□□ -0.31
RFFL-203ENST00000413582 NFIXQ14938 502 aa13.14□□□□□ -0.31
RFFL-203ENST00000413582 DNAJC10Q8IXB1 793 aa13.14□□□□□ -0.31
RFFL-203ENST00000413582 COL15A1P39059 1388 aa13.14□□□□□ -0.31
RFFL-203ENST00000413582 ANKRD31Q8N7Z5 1873 aa13.13□□□□□ -0.31
RFFL-203ENST00000413582 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
RFFL-203ENST00000413582 ZPR1O75312 459 aa13.13□□□□□ -0.31
RFFL-203ENST00000413582 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
RFFL-203ENST00000413582 UBR2Q8IWV8 1755 aa13.12□□□□□ -0.31
RFFL-203ENST00000413582 VEGFAP15692 232 aaPredicted RBP13.12□□□□□ -0.31
RFFL-203ENST00000413582 COL11A2P13942 1736 aaPredicted RBP13.12□□□□□ -0.31
RFFL-203ENST00000413582 FER1L6Q2WGJ9 1857 aa13.11□□□□□ -0.31
RFFL-203ENST00000413582 NFKBIEO00221 500 aa13.11□□□□□ -0.31
RFFL-203ENST00000413582 CYP19A1P11511 503 aaPredicted RBP13.11□□□□□ -0.31
RFFL-203ENST00000413582 SULT6B1Q6IMI4 303 aa13.11□□□□□ -0.31
RFFL-203ENST00000413582 POLR3GLQ9BT43 218 aa13.11□□□□□ -0.31
RFFL-203ENST00000413582 SLC52A2Q9HAB3 445 aa13.11□□□□□ -0.31
RFFL-203ENST00000413582 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
RFFL-203ENST00000413582 NARFQ9UHQ1 456 aa13.11□□□□□ -0.31
RFFL-203ENST00000413582 ZBTB1Q9Y2K1 713 aa13.11□□□□□ -0.31
RFFL-203ENST00000413582 SCN7AQ01118 1682 aa13.11□□□□□ -0.31
RFFL-203ENST00000413582 POTECB2RU33 542 aa13.1□□□□□ -0.31
RFFL-203ENST00000413582 TTLL6Q8N841 843 aa13.1□□□□□ -0.31
RFFL-203ENST00000413582 SERPINB2P05120 415 aa13.09□□□□□ -0.31
RFFL-203ENST00000413582 IL13P35225 146 aa13.09□□□□□ -0.31
RFFL-203ENST00000413582 AKAP4Q5JQC9 854 aa13.09□□□□□ -0.31
RFFL-203ENST00000413582 PANK3Q9H999 370 aa13.09□□□□□ -0.31
RFFL-203ENST00000413582 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
RFFL-203ENST00000413582 C2CD5Q86YS7 1000 aa13.08□□□□□ -0.32
RFFL-203ENST00000413582 MORC1Q86VD1 984 aa13.07□□□□□ -0.32
RFFL-203ENST00000413582 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
RFFL-203ENST00000413582 CACNA1SQ13698 1873 aa13.06□□□□□ -0.32
RFFL-203ENST00000413582 H0YIN7 160 aa13.06□□□□□ -0.32
RFFL-203ENST00000413582 RNMTO43148 476 aaKnown RBP13.06□□□□□ -0.32
RFFL-203ENST00000413582 ARFGEF2Q9Y6D5 1785 aa13.06□□□□□ -0.32
RFFL-203ENST00000413582 SLX4Q8IY92 1834 aa13.05□□□□□ -0.32
RFFL-203ENST00000413582 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
RFFL-203ENST00000413582 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
RFFL-203ENST00000413582 DPY19L2Q6NUT2 758 aa13.04□□□□□ -0.32
RFFL-203ENST00000413582 BICDL1Q6ZP65 573 aa13.04□□□□□ -0.32
RFFL-203ENST00000413582 PIAS4Q8N2W9 510 aaPredicted RBP13.04□□□□□ -0.32
RFFL-203ENST00000413582 TIMELESSQ9UNS1 1208 aa13.04□□□□□ -0.32
RFFL-203ENST00000413582 LTBP3Q9NS15 1303 aa13.04□□□□□ -0.32
RFFL-203ENST00000413582 SIPA1L3O60292 1781 aaPredicted RBP13.04□□□□□ -0.32
RFFL-203ENST00000413582 BCORQ6W2J9 1755 aa13.03□□□□□ -0.32
RFFL-203ENST00000413582 POTEIP0CG38 1075 aa13.03□□□□□ -0.32
RFFL-203ENST00000413582 POTEJP0CG39 1038 aa13.03□□□□□ -0.32
RFFL-203ENST00000413582 CANXP27824 592 aaKnown RBP13.03□□□□□ -0.32
RFFL-203ENST00000413582 EIF5P55010 431 aaKnown RBP13.03□□□□□ -0.32
RFFL-203ENST00000413582 ERFEQ4G0M1 354 aa13.03□□□□□ -0.32
RFFL-203ENST00000413582 MKRN1Q9UHC7 482 aaKnown RBP13.03□□□□□ -0.32
RFFL-203ENST00000413582 C21orf2O43822 256 aa13.02□□□□□ -0.33
RFFL-203ENST00000413582 TBC1D9BQ66K14 1250 aa13.02□□□□□ -0.33
RFFL-203ENST00000413582 PRR5LQ6MZQ0 368 aa13.02□□□□□ -0.33
RFFL-203ENST00000413582 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
RFFL-203ENST00000413582 ZNF622Q969S3 477 aaKnown RBP eCLIP13.02□□□□□ -0.33
RFFL-203ENST00000413582 BRIP1Q9BX63 1249 aa13.02□□□□□ -0.33
RFFL-203ENST00000413582 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
RFFL-203ENST00000413582 CNTNAP1P78357 1384 aa13.02□□□□□ -0.33
RFFL-203ENST00000413582 SCN4AP35499 1836 aa13.02□□□□□ -0.33
RFFL-203ENST00000413582 HMOX1P09601 288 aa13.01□□□□□ -0.33
RFFL-203ENST00000413582 HSPA5P11021 654 aaKnown RBP13.01□□□□□ -0.33
RFFL-203ENST00000413582 PDE6BP35913 854 aa13.01□□□□□ -0.33
RFFL-203ENST00000413582 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
RFFL-203ENST00000413582 TAOK3Q9H2K8 898 aa13.01□□□□□ -0.33
RFFL-203ENST00000413582 PDZRN3Q9UPQ7 1066 aa13.01□□□□□ -0.33
RFFL-203ENST00000413582 A0A087WZG4 1122 aa13□□□□□ -0.33
RFFL-203ENST00000413582 FOXN1O15353 648 aa13□□□□□ -0.33
RFFL-203ENST00000413582 CCDC24Q8N4L8 307 aa13□□□□□ -0.33
RFFL-203ENST00000413582 ADAMTSL1Q8N6G6 1762 aa12.99□□□□□ -0.33
RFFL-203ENST00000413582 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
RFFL-203ENST00000413582 PASKQ96RG2 1323 aa12.99□□□□□ -0.33
RFFL-203ENST00000413582 DDNO94850 711 aaPredicted RBP12.99□□□□□ -0.33
RFFL-203ENST00000413582 STARD3NLO95772 234 aa12.99□□□□□ -0.33
RFFL-203ENST00000413582 EIF4G2P78344 907 aaKnown RBP eCLIP12.99□□□□□ -0.33
RFFL-203ENST00000413582 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
RFFL-203ENST00000413582 ZNF496Q96IT1 587 aaPredicted RBP12.99□□□□□ -0.33
RFFL-203ENST00000413582 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
RFFL-203ENST00000413582 PRPF40BQ6NWY9 871 aaKnown RBP12.98□□□□□ -0.33
RFFL-203ENST00000413582 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
RFFL-203ENST00000413582 CNBD1Q8NA66 436 aa12.98□□□□□ -0.33
RFFL-203ENST00000413582 L3MBTL3Q96JM7 780 aaPredicted RBP12.98□□□□□ -0.33
RFFL-203ENST00000413582 TBC1D2BQ9UPU7 963 aa12.98□□□□□ -0.33
RFFL-203ENST00000413582 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
RFFL-203ENST00000413582 SRGNP10124 158 aa12.97□□□□□ -0.33
RFFL-203ENST00000413582 IL6STP40189 918 aaPredicted RBP12.97□□□□□ -0.33
RFFL-203ENST00000413582 STYK1Q6J9G0 422 aa12.97□□□□□ -0.33
RFFL-203ENST00000413582 LDHDQ86WU2 507 aa12.97□□□□□ -0.33
RFFL-203ENST00000413582 CNKSR1Q969H4 720 aa12.97□□□□□ -0.33
RFFL-203ENST00000413582 PRDM10Q9NQV6 1147 aa12.97□□□□□ -0.33
RFFL-203ENST00000413582 ZNF330Q9Y3S2 320 aaPredicted RBP12.97□□□□□ -0.33
RFFL-203ENST00000413582 IQCA1LA6NCM1 817 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms