RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 INTS4Q96HW7 963 aaKnown RBP18.19■□□□□ 0.5
TTC39A-208ENST00000413473 TMEM63CQ9P1W3 806 aa18.19■□□□□ 0.5
TTC39A-208ENST00000413473 MARF1Q9Y4F3 1742 aaKnown RBP18.19■□□□□ 0.5
TTC39A-208ENST00000413473 EIF4A1P60842 406 aaKnown RBP18.19■□□□□ 0.5
TTC39A-208ENST00000413473 NBPF6Q5VWK0 638 aa18.18■□□□□ 0.5
TTC39A-208ENST00000413473 NBPF4Q96M43 638 aa18.18■□□□□ 0.5
TTC39A-208ENST00000413473 IL17RAQ96F46 866 aa18.18■□□□□ 0.5
TTC39A-208ENST00000413473 CHPF2Q9P2E5 772 aa18.18■□□□□ 0.5
TTC39A-208ENST00000413473 CEMIPQ8WUJ3 1361 aa18.17■□□□□ 0.5
TTC39A-208ENST00000413473 PI4KAP2A4QPH2 592 aa18.17■□□□□ 0.5
TTC39A-208ENST00000413473 PI4KAP1Q8N8J0 262 aa18.17■□□□□ 0.5
TTC39A-208ENST00000413473 PI4K2BQ8TCG2 481 aa18.17■□□□□ 0.5
TTC39A-208ENST00000413473 IP6K1Q92551 441 aa18.17■□□□□ 0.5
TTC39A-208ENST00000413473 KCNQ3O43525 872 aa18.17■□□□□ 0.5
TTC39A-208ENST00000413473 PHF8Q9UPP1 1060 aa18.17■□□□□ 0.5
TTC39A-208ENST00000413473 HSPA4P34932 840 aa18.16■□□□□ 0.5
TTC39A-208ENST00000413473 DNAAF4Q8WXU2 420 aa18.16■□□□□ 0.5
TTC39A-208ENST00000413473 SYCE3A1L190 88 aa18.16■□□□□ 0.5
TTC39A-208ENST00000413473 ZBTB7CA1YPR0 619 aa18.16■□□□□ 0.5
TTC39A-208ENST00000413473 ANXA1P04083 346 aa18.16■□□□□ 0.5
TTC39A-208ENST00000413473 BEND3Q5T5X7 828 aa18.16■□□□□ 0.5
TTC39A-208ENST00000413473 ZSCAN30Q86W11 494 aa18.16■□□□□ 0.5
TTC39A-208ENST00000413473 KIF1BPQ96EK5 621 aa18.16■□□□□ 0.5
TTC39A-208ENST00000413473 LRSAM1Q6UWE0 723 aa18.15■□□□□ 0.5
TTC39A-208ENST00000413473 N4BP2Q86UW6 1770 aaPredicted RBP18.15■□□□□ 0.5
TTC39A-208ENST00000413473 EPB41L2O43491 1005 aaKnown RBP18.14■□□□□ 0.5
TTC39A-208ENST00000413473 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.5
TTC39A-208ENST00000413473 MBD3O95983 291 aa18.14■□□□□ 0.49
TTC39A-208ENST00000413473 SGSM2O43147 1006 aa18.14■□□□□ 0.49
TTC39A-208ENST00000413473 FOXD4L6Q3SYB3 417 aaPredicted RBP18.14■□□□□ 0.49
TTC39A-208ENST00000413473 FOXD4L3Q6VB84 417 aaPredicted RBP18.14■□□□□ 0.49
TTC39A-208ENST00000413473 HOXB7P09629 217 aa18.13■□□□□ 0.49
TTC39A-208ENST00000413473 TEFQ10587 303 aa18.13■□□□□ 0.49
TTC39A-208ENST00000413473 BTBD11A6QL63 1104 aa18.12■□□□□ 0.49
TTC39A-208ENST00000413473 MPRIPQ6WCQ1 1025 aa18.12■□□□□ 0.49
TTC39A-208ENST00000413473 CNTROBQ8N137 903 aa18.12■□□□□ 0.49
TTC39A-208ENST00000413473 RAD50Q92878 1312 aa18.12■□□□□ 0.49
TTC39A-208ENST00000413473 LRRC59Q96AG4 307 aaKnown RBP18.12■□□□□ 0.49
TTC39A-208ENST00000413473 PDLIM2Q96JY6 352 aa18.12■□□□□ 0.49
TTC39A-208ENST00000413473 CHMP4AQ9BY43 222 aa18.11■□□□□ 0.49
TTC39A-208ENST00000413473 SNX14Q9Y5W7 946 aa18.11■□□□□ 0.49
TTC39A-208ENST00000413473 MSNP26038 577 aaKnown RBP18.11■□□□□ 0.49
TTC39A-208ENST00000413473 ZNF530Q6P9A1 599 aaPredicted RBP18.11■□□□□ 0.49
TTC39A-208ENST00000413473 CWC27Q6UX04 472 aaKnown RBP18.11■□□□□ 0.49
TTC39A-208ENST00000413473 LSG1Q9H089 658 aaKnown RBP18.11■□□□□ 0.49
TTC39A-208ENST00000413473 USP54Q70EL1 1684 aa18.11■□□□□ 0.49
TTC39A-208ENST00000413473 LTN1O94822 1766 aa18.11■□□□□ 0.49
TTC39A-208ENST00000413473 PSME1Q06323 249 aa18.1■□□□□ 0.49
TTC39A-208ENST00000413473 OS9Q13438 667 aaPredicted RBP18.1■□□□□ 0.49
TTC39A-208ENST00000413473 HSP90AB4PQ58FF6 505 aa18.1■□□□□ 0.49
TTC39A-208ENST00000413473 RASEFQ8IZ41 740 aa18.1■□□□□ 0.49
TTC39A-208ENST00000413473 GDPD2Q9HCC8 539 aa18.1■□□□□ 0.49
TTC39A-208ENST00000413473 PLEKHG5O94827 1062 aa18.09■□□□□ 0.49
TTC39A-208ENST00000413473 AKAP4Q5JQC9 854 aa18.09■□□□□ 0.49
TTC39A-208ENST00000413473 SPG7Q9UQ90 795 aa18.09■□□□□ 0.49
TTC39A-208ENST00000413473 ADCY9O60503 1353 aa18.09■□□□□ 0.49
TTC39A-208ENST00000413473 WDR33Q9C0J8 1336 aaKnown RBP18.09■□□□□ 0.49
TTC39A-208ENST00000413473 KIAA1211Q6ZU35 1233 aa18.09■□□□□ 0.49
TTC39A-208ENST00000413473 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.49
TTC39A-208ENST00000413473 HS1BP3Q53T59 392 aa18.08■□□□□ 0.49
TTC39A-208ENST00000413473 ESCO1Q5FWF5 840 aa18.08■□□□□ 0.49
TTC39A-208ENST00000413473 LARP6Q9BRS8 491 aaKnown RBP18.08■□□□□ 0.49
TTC39A-208ENST00000413473 GADD45BO75293 160 aaPredicted RBP18.08■□□□□ 0.48
TTC39A-208ENST00000413473 RNF214Q8ND24 703 aa18.08■□□□□ 0.48
TTC39A-208ENST00000413473 DBF4Q9UBU7 674 aaPredicted RBP18.08■□□□□ 0.48
TTC39A-208ENST00000413473 USP48Q86UV5 1035 aa18.07■□□□□ 0.48
TTC39A-208ENST00000413473 TTC14Q96N46 770 aa18.07■□□□□ 0.48
TTC39A-208ENST00000413473 MED1Q15648 1581 aaPredicted RBP18.07■□□□□ 0.48
TTC39A-208ENST00000413473 TCHHQ07283 1943 aa18.07■□□□□ 0.48
TTC39A-208ENST00000413473 GLRX3O76003 335 aaKnown RBP18.07■□□□□ 0.48
TTC39A-208ENST00000413473 AK2P54819 239 aa18.07■□□□□ 0.48
TTC39A-208ENST00000413473 KCNH5Q8NCM2 988 aa18.07■□□□□ 0.48
TTC39A-208ENST00000413473 C9orf78Q9NZ63 289 aaPredicted RBP18.07■□□□□ 0.48
TTC39A-208ENST00000413473 CLASRPQ8N2M8 674 aaKnown RBP18.07■□□□□ 0.48
TTC39A-208ENST00000413473 MAP3K2Q9Y2U5 619 aa18.07■□□□□ 0.48
TTC39A-208ENST00000413473 FER1L4A9Z1Z3 1794 aa18.06■□□□□ 0.48
TTC39A-208ENST00000413473 TTC41PQ6P2S7 1318 aa18.06■□□□□ 0.48
TTC39A-208ENST00000413473 NFAT5O94916 1531 aa18.06■□□□□ 0.48
TTC39A-208ENST00000413473 RNMTO43148 476 aaKnown RBP18.06■□□□□ 0.48
TTC39A-208ENST00000413473 MTX1Q13505 466 aa18.06■□□□□ 0.48
TTC39A-208ENST00000413473 PROSER3Q2NL68 480 aa18.06■□□□□ 0.48
TTC39A-208ENST00000413473 NOL7Q9UMY1 257 aaKnown RBP18.06■□□□□ 0.48
TTC39A-208ENST00000413473 USP42Q9H9J4 1324 aaKnown RBP18.05■□□□□ 0.48
TTC39A-208ENST00000413473 CPA1P15085 419 aa18.05■□□□□ 0.48
TTC39A-208ENST00000413473 RUFY3Q7L099 469 aa18.05■□□□□ 0.48
TTC39A-208ENST00000413473 SYAP1Q96A49 352 aaPredicted RBP18.05■□□□□ 0.48
TTC39A-208ENST00000413473 DIAPH3Q9NSV4 1193 aa18.05■□□□□ 0.48
TTC39A-208ENST00000413473 LIMCH1Q9UPQ0 1083 aa18.05■□□□□ 0.48
TTC39A-208ENST00000413473 PA2G4Q9UQ80 394 aaKnown RBP18.05■□□□□ 0.48
TTC39A-208ENST00000413473 KDM3BQ7LBC6 1761 aa18.05■□□□□ 0.48
TTC39A-208ENST00000413473 RPAP1Q9BWH6 1393 aaPredicted RBP18.04■□□□□ 0.48
TTC39A-208ENST00000413473 GIGYF1O75420 1035 aaPredicted RBP18.04■□□□□ 0.48
TTC39A-208ENST00000413473 PRKCSHP14314 528 aaPredicted RBP18.04■□□□□ 0.48
TTC39A-208ENST00000413473 AMOTQ4VCS5 1084 aa18.04■□□□□ 0.48
TTC39A-208ENST00000413473 C1orf141Q5JVX7 400 aa18.04■□□□□ 0.48
TTC39A-208ENST00000413473 TSPY26PQ9H489 355 aa18.04■□□□□ 0.48
TTC39A-208ENST00000413473 RGPD2P0DJD1 1756 aa18.04■□□□□ 0.48
TTC39A-208ENST00000413473 OFD1O75665 1012 aa18.04■□□□□ 0.48
TTC39A-208ENST00000413473 CWF19L2Q2TBE0 894 aaKnown RBP18.04■□□□□ 0.48
TTC39A-208ENST00000413473 KSR2Q6VAB6 950 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms