RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 MEGF6O75095 1541 aa16■□□□□ 0.15
LITAF-203ENST00000413364 GIGYF1O75420 1035 aaPredicted RBP16■□□□□ 0.15
LITAF-203ENST00000413364 MTERF4Q7Z6M4 381 aaKnown RBP16■□□□□ 0.15
LITAF-203ENST00000413364 C16orf71Q8IYS4 520 aaPredicted RBP16■□□□□ 0.15
LITAF-203ENST00000413364 USP44Q9H0E7 712 aa16■□□□□ 0.15
LITAF-203ENST00000413364 GSPT1P15170 499 aaKnown RBP15.99■□□□□ 0.15
LITAF-203ENST00000413364 ATP8B2P98198 1209 aa15.99■□□□□ 0.15
LITAF-203ENST00000413364 TTC22Q5TAA0 569 aa15.99■□□□□ 0.15
LITAF-203ENST00000413364 SMARCA5O60264 1052 aaPredicted RBP15.99■□□□□ 0.15
LITAF-203ENST00000413364 TERF1P54274 439 aa15.99■□□□□ 0.15
LITAF-203ENST00000413364 TBC1D9Q6ZT07 1266 aa15.99■□□□□ 0.15
LITAF-203ENST00000413364 SRCIN1Q9C0H9 1055 aa15.99■□□□□ 0.15
LITAF-203ENST00000413364 DBF4Q9UBU7 674 aaPredicted RBP15.99■□□□□ 0.15
LITAF-203ENST00000413364 ZNF335Q9H4Z2 1342 aaPredicted RBP15.98■□□□□ 0.15
LITAF-203ENST00000413364 CDC45O75419 566 aa15.98■□□□□ 0.15
LITAF-203ENST00000413364 PHKG2P15735 406 aa15.98■□□□□ 0.15
LITAF-203ENST00000413364 RBM25P49756 843 aaKnown RBP15.98■□□□□ 0.15
LITAF-203ENST00000413364 KDM6AO15550 1401 aaPredicted RBP15.98■□□□□ 0.15
LITAF-203ENST00000413364 GOLGA6L3A6NEY3 463 aa15.98■□□□□ 0.15
LITAF-203ENST00000413364 APBB1O00213 710 aa15.98■□□□□ 0.15
LITAF-203ENST00000413364 UBTFL1P0CB47 393 aaPredicted RBP15.98■□□□□ 0.15
LITAF-203ENST00000413364 PAXIP1Q6ZW49 1069 aaPredicted RBP15.98■□□□□ 0.15
LITAF-203ENST00000413364 OTUD7AQ8TE49 926 aaPredicted RBP15.98■□□□□ 0.15
LITAF-203ENST00000413364 DNAAF4Q8WXU2 420 aa15.98■□□□□ 0.15
LITAF-203ENST00000413364 SLAIN2Q9P270 581 aa15.98■□□□□ 0.15
LITAF-203ENST00000413364 LRRFIP2Q9Y608 721 aaKnown RBP15.98■□□□□ 0.15
LITAF-203ENST00000413364 ESPNB1AK53 854 aa15.97■□□□□ 0.15
LITAF-203ENST00000413364 TBC1D2Q9BYX2 928 aa15.97■□□□□ 0.15
LITAF-203ENST00000413364 SOS2Q07890 1332 aaPredicted RBP15.97■□□□□ 0.15
LITAF-203ENST00000413364 SLC52A2Q9HAB3 445 aa15.97■□□□□ 0.15
LITAF-203ENST00000413364 SCN11AQ9UI33 1791 aa15.97■□□□□ 0.15
LITAF-203ENST00000413364 PNMA6EA0A0J9YXQ4 647 aa15.96■□□□□ 0.15
LITAF-203ENST00000413364 PI4KAP2A4QPH2 592 aa15.96■□□□□ 0.15
LITAF-203ENST00000413364 BEND3Q5T5X7 828 aa15.96■□□□□ 0.15
LITAF-203ENST00000413364 IFNL2Q8IZJ0 200 aa15.96■□□□□ 0.15
LITAF-203ENST00000413364 PI4KAP1Q8N8J0 262 aa15.96■□□□□ 0.15
LITAF-203ENST00000413364 ADCY9O60503 1353 aa15.96■□□□□ 0.15
LITAF-203ENST00000413364 XRCC6P12956 609 aaKnown RBP eCLIP15.96■□□□□ 0.14
LITAF-203ENST00000413364 ANXA1P04083 346 aa15.95■□□□□ 0.14
LITAF-203ENST00000413364 EXOC6BQ9Y2D4 811 aa15.94■□□□□ 0.14
LITAF-203ENST00000413364 PKD1L3Q7Z443 1732 aa15.94■□□□□ 0.14
LITAF-203ENST00000413364 ZNF790Q6PG37 636 aa15.94■□□□□ 0.14
LITAF-203ENST00000413364 OSBPL3Q9H4L5 887 aa15.94■□□□□ 0.14
LITAF-203ENST00000413364 HYPKQ9NX55 129 aa15.94■□□□□ 0.14
LITAF-203ENST00000413364 IBTKQ9P2D0 1353 aaPredicted RBP15.94■□□□□ 0.14
LITAF-203ENST00000413364 MRC1P22897 1456 aa15.94■□□□□ 0.14
LITAF-203ENST00000413364 FSD2A1L4K1 749 aa15.93■□□□□ 0.14
LITAF-203ENST00000413364 PRAMEF22A3QJZ6 481 aa15.93■□□□□ 0.14
LITAF-203ENST00000413364 PROSER3Q2NL68 480 aa15.93■□□□□ 0.14
LITAF-203ENST00000413364 SSH3Q8TE77 659 aa15.93■□□□□ 0.14
LITAF-203ENST00000413364 DCAF5Q96JK2 942 aa15.93■□□□□ 0.14
LITAF-203ENST00000413364 LRRCC1Q9C099 1032 aa15.93■□□□□ 0.14
LITAF-203ENST00000413364 CYP27B1O15528 508 aa15.93■□□□□ 0.14
LITAF-203ENST00000413364 HSP90AB1P08238 724 aaKnown RBP15.92■□□□□ 0.14
LITAF-203ENST00000413364 KSR2Q6VAB6 950 aa15.92■□□□□ 0.14
LITAF-203ENST00000413364 PRDM11Q9NQV5 511 aa15.92■□□□□ 0.14
LITAF-203ENST00000413364 ALDH1L1O75891 902 aa15.92■□□□□ 0.14
LITAF-203ENST00000413364 SDSP20132 328 aa15.92■□□□□ 0.14
LITAF-203ENST00000413364 PDE1AP54750 535 aa15.92■□□□□ 0.14
LITAF-203ENST00000413364 SLC39A6Q13433 755 aa15.92■□□□□ 0.14
LITAF-203ENST00000413364 NFATC2IPQ8NCF5 419 aa15.92■□□□□ 0.14
LITAF-203ENST00000413364 DDX21Q9NR30 783 aaKnown RBP eCLIP15.92■□□□□ 0.14
LITAF-203ENST00000413364 WDR17Q8IZU2 1322 aa15.91■□□□□ 0.14
LITAF-203ENST00000413364 POLA2Q14181 598 aa15.91■□□□□ 0.14
LITAF-203ENST00000413364 SALL3Q9BXA9 1300 aa15.91■□□□□ 0.14
LITAF-203ENST00000413364 NBPF7P0C2Y1 421 aaPredicted RBP15.91■□□□□ 0.14
LITAF-203ENST00000413364 MAP3K2Q9Y2U5 619 aa15.91■□□□□ 0.14
LITAF-203ENST00000413364 BRD2P25440 801 aaKnown RBP15.9■□□□□ 0.14
LITAF-203ENST00000413364 DMTNQ08495 405 aa15.9■□□□□ 0.14
LITAF-203ENST00000413364 PPP1R42Q7Z4L9 355 aa15.9■□□□□ 0.14
LITAF-203ENST00000413364 ANTXR1Q9H6X2 564 aa15.9■□□□□ 0.14
LITAF-203ENST00000413364 MRE11P49959 708 aa15.89■□□□□ 0.13
LITAF-203ENST00000413364 PDIA6Q15084 440 aa15.89■□□□□ 0.13
LITAF-203ENST00000413364 ISY1Q9ULR0 285 aaKnown RBP15.89■□□□□ 0.13
LITAF-203ENST00000413364 RAB11FIP3O75154 756 aa15.89■□□□□ 0.13
LITAF-203ENST00000413364 DDX58O95786 925 aaKnown RBP15.89■□□□□ 0.13
LITAF-203ENST00000413364 CASC1Q6TDU7 716 aa15.89■□□□□ 0.13
LITAF-203ENST00000413364 KIAA1211Q6ZU35 1233 aa15.89■□□□□ 0.13
LITAF-203ENST00000413364 SNX21Q969T3 373 aa15.89■□□□□ 0.13
LITAF-203ENST00000413364 COL5A2P05997 1499 aaPredicted RBP15.89■□□□□ 0.13
LITAF-203ENST00000413364 HSCBQ8IWL3 235 aa15.88■□□□□ 0.13
LITAF-203ENST00000413364 KIF2CQ99661 725 aa15.88■□□□□ 0.13
LITAF-203ENST00000413364 C5P01031 1676 aa15.88■□□□□ 0.13
LITAF-203ENST00000413364 ABCA3Q99758 1704 aa15.88■□□□□ 0.13
LITAF-203ENST00000413364 PARP4Q9UKK3 1724 aaKnown RBP15.88■□□□□ 0.13
LITAF-203ENST00000413364 ZNF496Q96IT1 587 aaPredicted RBP15.88■□□□□ 0.13
LITAF-203ENST00000413364 SLKQ9H2G2 1235 aaPredicted RBP15.88■□□□□ 0.13
LITAF-203ENST00000413364 STAP2Q9UGK3 403 aa15.88■□□□□ 0.13
LITAF-203ENST00000413364 SRGAP3O43295 1099 aa15.87■□□□□ 0.13
LITAF-203ENST00000413364 KIF20AO95235 890 aa15.87■□□□□ 0.13
LITAF-203ENST00000413364 MX1P20591 662 aa15.87■□□□□ 0.13
LITAF-203ENST00000413364 TOM1L2Q6ZVM7 507 aa15.87■□□□□ 0.13
LITAF-203ENST00000413364 TTC5Q8N0Z6 440 aa15.87■□□□□ 0.13
LITAF-203ENST00000413364 HDAC5Q9UQL6 1122 aa15.87■□□□□ 0.13
LITAF-203ENST00000413364 CABP4P57796 275 aa15.87■□□□□ 0.13
LITAF-203ENST00000413364 LINS1Q8NG48 757 aa15.87■□□□□ 0.13
LITAF-203ENST00000413364 NHSL1Q5SYE7 1610 aa15.86■□□□□ 0.13
LITAF-203ENST00000413364 SURF6O75683 361 aaKnown RBP15.86■□□□□ 0.13
LITAF-203ENST00000413364 SNRPA1P09661 255 aaKnown RBP15.86■□□□□ 0.13
LITAF-203ENST00000413364 MTX1Q13505 466 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms