RNA–Protein interactions for RNA: ENST00000413288.1

FAM238B-201, Transcript of family with sequence similarity 238 member B, humanhuman

TSL 3

Gene FAM238B, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-201ENST00000413288 TNS2Q63HR2 1409 aa12.61□□□□□ -0.39
FAM238B-201ENST00000413288 SPATA31A6Q5VVP1 1343 aa12.61□□□□□ -0.39
FAM238B-201ENST00000413288 FKBP5Q13451 457 aaPredicted RBP12.6□□□□□ -0.39
FAM238B-201ENST00000413288 SLC4A10Q6U841 1118 aa12.6□□□□□ -0.39
FAM238B-201ENST00000413288 SKAP1Q86WV1 359 aa12.6□□□□□ -0.39
FAM238B-201ENST00000413288 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
FAM238B-201ENST00000413288 KCPQ6ZWJ8 1503 aa12.59□□□□□ -0.39
FAM238B-201ENST00000413288 ZBTB7BO15156 539 aaPredicted RBP12.59□□□□□ -0.39
FAM238B-201ENST00000413288 MEX3CQ5U5Q3 659 aaKnown RBP12.59□□□□□ -0.39
FAM238B-201ENST00000413288 INTS3Q68E01 1043 aaKnown RBP12.59□□□□□ -0.39
FAM238B-201ENST00000413288 UNC5CLQ8IV45 518 aa12.59□□□□□ -0.39
FAM238B-201ENST00000413288 C1orf115Q9H7X2 142 aa12.59□□□□□ -0.39
FAM238B-201ENST00000413288 ZBTB40Q9NUA8 1239 aa12.59□□□□□ -0.39
FAM238B-201ENST00000413288 THRAP3Q9Y2W1 955 aaKnown RBP12.59□□□□□ -0.39
FAM238B-201ENST00000413288 BCL9LQ86UU0 1499 aa12.59□□□□□ -0.39
FAM238B-201ENST00000413288 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
FAM238B-201ENST00000413288 DDB1Q16531 1140 aa12.58□□□□□ -0.4
FAM238B-201ENST00000413288 FMNL2Q96PY5 1086 aa12.58□□□□□ -0.4
FAM238B-201ENST00000413288 CDCA7Q9BWT1 371 aaPredicted RBP12.58□□□□□ -0.4
FAM238B-201ENST00000413288 CHMP4AQ9BY43 222 aa12.58□□□□□ -0.4
FAM238B-201ENST00000413288 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
FAM238B-201ENST00000413288 SOCS7O14512 581 aa12.57□□□□□ -0.4
FAM238B-201ENST00000413288 PROSER3Q2NL68 480 aa12.57□□□□□ -0.4
FAM238B-201ENST00000413288 CHMP4BQ9H444 224 aaKnown RBP12.57□□□□□ -0.4
FAM238B-201ENST00000413288 RWDD1Q9H446 243 aaPredicted RBP12.57□□□□□ -0.4
FAM238B-201ENST00000413288 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
FAM238B-201ENST00000413288 USP21Q9UK80 565 aa12.57□□□□□ -0.4
FAM238B-201ENST00000413288 USP16Q9Y5T5 823 aa12.57□□□□□ -0.4
FAM238B-201ENST00000413288 ARFGEF2Q9Y6D5 1785 aa12.56□□□□□ -0.4
FAM238B-201ENST00000413288 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
FAM238B-201ENST00000413288 VPS72Q15906 364 aa12.56□□□□□ -0.4
FAM238B-201ENST00000413288 PXDNLA1KZ92 1463 aa12.56□□□□□ -0.4
FAM238B-201ENST00000413288 A0A0G2JS52 829 aa12.55□□□□□ -0.4
FAM238B-201ENST00000413288 PTCD1O75127 700 aaKnown RBP12.55□□□□□ -0.4
FAM238B-201ENST00000413288 MYL6BP14649 208 aa12.55□□□□□ -0.4
FAM238B-201ENST00000413288 PIP4K2AP48426 406 aaPredicted RBP12.55□□□□□ -0.4
FAM238B-201ENST00000413288 CCT4P50991 539 aaKnown RBP12.55□□□□□ -0.4
FAM238B-201ENST00000413288 FAM98CQ17RN3 349 aaKnown RBP12.55□□□□□ -0.4
FAM238B-201ENST00000413288 BARGINQ6ZT62 677 aa12.55□□□□□ -0.4
FAM238B-201ENST00000413288 ILDR2Q71H61 639 aa12.55□□□□□ -0.4
FAM238B-201ENST00000413288 FNBP4Q8N3X1 1017 aaPredicted RBP12.55□□□□□ -0.4
FAM238B-201ENST00000413288 PIGBQ92521 554 aa12.55□□□□□ -0.4
FAM238B-201ENST00000413288 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
FAM238B-201ENST00000413288 AIMP1Q12904 312 aaKnown RBP12.54□□□□□ -0.4
FAM238B-201ENST00000413288 PDIA6Q15084 440 aa12.54□□□□□ -0.4
FAM238B-201ENST00000413288 SYTL4Q96C24 671 aaPredicted RBP12.54□□□□□ -0.4
FAM238B-201ENST00000413288 MEIS3Q99687 375 aa12.54□□□□□ -0.4
FAM238B-201ENST00000413288 DDX21Q9NR30 783 aaKnown RBP eCLIP12.54□□□□□ -0.4
FAM238B-201ENST00000413288 TJP1Q07157 1748 aa12.54□□□□□ -0.4
FAM238B-201ENST00000413288 PI4KAP2A4QPH2 592 aa12.53□□□□□ -0.4
FAM238B-201ENST00000413288 MYT1Q01538 1121 aa12.53□□□□□ -0.4
FAM238B-201ENST00000413288 PI4KAP1Q8N8J0 262 aa12.53□□□□□ -0.4
FAM238B-201ENST00000413288 MARCH10Q8NA82 808 aaPredicted RBP12.53□□□□□ -0.4
FAM238B-201ENST00000413288 ACSBG1Q96GR2 724 aa12.53□□□□□ -0.4
FAM238B-201ENST00000413288 HYPKQ9NX55 129 aa12.53□□□□□ -0.4
FAM238B-201ENST00000413288 ASAP1Q9ULH1 1129 aa12.53□□□□□ -0.4
FAM238B-201ENST00000413288 THSD7AQ9UPZ6 1657 aa12.53□□□□□ -0.4
FAM238B-201ENST00000413288 AFF2P51816 1311 aa12.53□□□□□ -0.4
FAM238B-201ENST00000413288 ADCY9O60503 1353 aa12.53□□□□□ -0.4
FAM238B-201ENST00000413288 BCL9O00512 1426 aa12.53□□□□□ -0.4
FAM238B-201ENST00000413288 NUP188Q5SRE5 1749 aa12.52□□□□□ -0.41
FAM238B-201ENST00000413288 PRIM1P49642 420 aaKnown RBP12.52□□□□□ -0.41
FAM238B-201ENST00000413288 RGS3P49796 1198 aa12.52□□□□□ -0.41
FAM238B-201ENST00000413288 HDAC1Q13547 482 aaPredicted RBP12.52□□□□□ -0.41
FAM238B-201ENST00000413288 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
FAM238B-201ENST00000413288 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
FAM238B-201ENST00000413288 ATG3Q9NT62 314 aa12.52□□□□□ -0.41
FAM238B-201ENST00000413288 PDZRN3Q9UPQ7 1066 aa12.52□□□□□ -0.41
FAM238B-201ENST00000413288 XAGE3Q8WTP9 111 aa12.51□□□□□ -0.41
FAM238B-201ENST00000413288 MAP3K2Q9Y2U5 619 aa12.51□□□□□ -0.41
FAM238B-201ENST00000413288 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
FAM238B-201ENST00000413288 KSR2Q6VAB6 950 aa12.5□□□□□ -0.41
FAM238B-201ENST00000413288 COPS6Q7L5N1 327 aa12.5□□□□□ -0.41
FAM238B-201ENST00000413288 SRCIN1Q9C0H9 1055 aa12.5□□□□□ -0.41
FAM238B-201ENST00000413288 ATP10DQ9P241 1426 aa12.5□□□□□ -0.41
FAM238B-201ENST00000413288 BRWD3Q6RI45 1802 aa12.49□□□□□ -0.41
FAM238B-201ENST00000413288 DDX58O95786 925 aaKnown RBP12.49□□□□□ -0.41
FAM238B-201ENST00000413288 A1BGP04217 495 aa12.49□□□□□ -0.41
FAM238B-201ENST00000413288 BEND3Q5T5X7 828 aa12.49□□□□□ -0.41
FAM238B-201ENST00000413288 RIC3Q7Z5B4 369 aa12.49□□□□□ -0.41
FAM238B-201ENST00000413288 DNAJC10Q8IXB1 793 aa12.49□□□□□ -0.41
FAM238B-201ENST00000413288 SIRT2Q8IXJ6 389 aa12.49□□□□□ -0.41
FAM238B-201ENST00000413288 BTAF1O14981 1849 aa12.48□□□□□ -0.41
FAM238B-201ENST00000413288 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
FAM238B-201ENST00000413288 NBPF14Q5TI25 921 aa12.48□□□□□ -0.41
FAM238B-201ENST00000413288 CEP85Q6P2H3 762 aa12.48□□□□□ -0.41
FAM238B-201ENST00000413288 NBPF10Q6P3W6 841 aaKnown RBP12.48□□□□□ -0.41
FAM238B-201ENST00000413288 LRP10Q7Z4F1 713 aa12.48□□□□□ -0.41
FAM238B-201ENST00000413288 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
FAM238B-201ENST00000413288 ANKRD44Q8N8A2 993 aa12.48□□□□□ -0.41
FAM238B-201ENST00000413288 ATRNO75882 1429 aa12.47□□□□□ -0.41
FAM238B-201ENST00000413288 ERBB4Q15303 1308 aa12.47□□□□□ -0.41
FAM238B-201ENST00000413288 GNAI2P04899 355 aa12.47□□□□□ -0.41
FAM238B-201ENST00000413288 GNAI3P08754 354 aa12.47□□□□□ -0.41
FAM238B-201ENST00000413288 RPAP2Q8IXW5 612 aaPredicted RBP12.47□□□□□ -0.41
FAM238B-201ENST00000413288 SMC5Q8IY18 1101 aa12.47□□□□□ -0.41
FAM238B-201ENST00000413288 GJD4Q96KN9 370 aaPredicted RBP12.47□□□□□ -0.41
FAM238B-201ENST00000413288 USP44Q9H0E7 712 aa12.47□□□□□ -0.41
FAM238B-201ENST00000413288 NHSQ6T4R5 1651 aa12.47□□□□□ -0.41
FAM238B-201ENST00000413288 ANKRD36CQ5JPF3 1778 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms