RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 KCPQ6ZWJ8 1503 aa25.15■■□□□ 1.62
ITGA6-204ENST00000412899 COL15A1P39059 1388 aa25.15■■□□□ 1.62
ITGA6-204ENST00000412899 U2SURPO15042 1029 aaKnown RBP25.14■■□□□ 1.62
ITGA6-204ENST00000412899 TTC5Q8N0Z6 440 aa25.14■■□□□ 1.62
ITGA6-204ENST00000412899 ARFGEF1Q9Y6D6 1849 aa25.14■■□□□ 1.61
ITGA6-204ENST00000412899 NMRK2Q9NPI5 230 aa25.13■■□□□ 1.61
ITGA6-204ENST00000412899 VIRMAQ69YN4 1812 aaKnown RBP25.13■■□□□ 1.61
ITGA6-204ENST00000412899 CANXP27824 592 aaKnown RBP25.12■■□□□ 1.61
ITGA6-204ENST00000412899 NFIXQ14938 502 aa25.12■■□□□ 1.61
ITGA6-204ENST00000412899 RNF181Q9P0P0 153 aa25.11■■□□□ 1.61
ITGA6-204ENST00000412899 TEFQ10587 303 aa25.1■■□□□ 1.61
ITGA6-204ENST00000412899 NPC1L1Q9UHC9 1359 aa25.09■■□□□ 1.61
ITGA6-204ENST00000412899 STARD3NLO95772 234 aa25.09■■□□□ 1.61
ITGA6-204ENST00000412899 SERPINB2P05120 415 aa25.09■■□□□ 1.61
ITGA6-204ENST00000412899 GAS2L2Q8NHY3 880 aa25.09■■□□□ 1.61
ITGA6-204ENST00000412899 BCL2L12Q9HB09 334 aa25.09■■□□□ 1.61
ITGA6-204ENST00000412899 GNAT3A8MTJ3 354 aa25.08■■□□□ 1.61
ITGA6-204ENST00000412899 APLP1P51693 650 aa25.08■■□□□ 1.61
ITGA6-204ENST00000412899 C16orf71Q8IYS4 520 aaPredicted RBP25.08■■□□□ 1.61
ITGA6-204ENST00000412899 COL3A1P02461 1466 aaPredicted RBP25.07■■□□□ 1.6
ITGA6-204ENST00000412899 KDM2BQ8NHM5 1336 aa25.07■■□□□ 1.6
ITGA6-204ENST00000412899 IL17REQ8NFR9 667 aa25.06■■□□□ 1.6
ITGA6-204ENST00000412899 UBR2Q8IWV8 1755 aa25.05■■□□□ 1.6
ITGA6-204ENST00000412899 A0A087WZG4 1122 aa25.05■■□□□ 1.6
ITGA6-204ENST00000412899 ZNF790Q6PG37 636 aa25.05■■□□□ 1.6
ITGA6-204ENST00000412899 BICDL1Q6ZP65 573 aa25.05■■□□□ 1.6
ITGA6-204ENST00000412899 ZNF496Q96IT1 587 aaPredicted RBP25.05■■□□□ 1.6
ITGA6-204ENST00000412899 EIF5P55010 431 aaKnown RBP25.04■■□□□ 1.6
ITGA6-204ENST00000412899 IFFO2Q5TF58 517 aa25.04■■□□□ 1.6
ITGA6-204ENST00000412899 TEX13AQ9BXU3 409 aaPredicted RBP25.04■■□□□ 1.6
ITGA6-204ENST00000412899 AFDNP55196 1824 aaKnown RBP25.04■■□□□ 1.6
ITGA6-204ENST00000412899 HEG1Q9ULI3 1381 aa25.04■■□□□ 1.6
ITGA6-204ENST00000412899 CEP350Q5VT06 3117 aa25.03■■□□□ 1.6
ITGA6-204ENST00000412899 ZNF330Q9Y3S2 320 aaPredicted RBP25.03■■□□□ 1.6
ITGA6-204ENST00000412899 C2CD5Q86YS7 1000 aa25.02■■□□□ 1.6
ITGA6-204ENST00000412899 RBM46Q8TBY0 533 aaKnown RBP25.02■■□□□ 1.6
ITGA6-204ENST00000412899 CFAP53Q96M91 514 aa25.02■■□□□ 1.6
ITGA6-204ENST00000412899 NRXN2Q9P2S2 1712 aa25.02■■□□□ 1.6
ITGA6-204ENST00000412899 H0YIN7 160 aa25.01■■□□□ 1.59
ITGA6-204ENST00000412899 RASSF7Q02833 373 aa25.01■■□□□ 1.59
ITGA6-204ENST00000412899 TTLL6Q8N841 843 aa25.01■■□□□ 1.59
ITGA6-204ENST00000412899 NPM2Q86SE8 214 aaKnown RBP25■■□□□ 1.59
ITGA6-204ENST00000412899 FMNL2Q96PY5 1086 aa25■■□□□ 1.59
ITGA6-204ENST00000412899 RRAGCQ9HB90 399 aa25■■□□□ 1.59
ITGA6-204ENST00000412899 PRKAR2BP31323 418 aa24.99■■□□□ 1.59
ITGA6-204ENST00000412899 TBC1D9BQ66K14 1250 aa24.99■■□□□ 1.59
ITGA6-204ENST00000412899 TBC1D2BQ9UPU7 963 aa24.99■■□□□ 1.59
ITGA6-204ENST00000412899 CARMIL3Q8ND23 1372 aa24.98■■□□□ 1.59
ITGA6-204ENST00000412899 BTBD11A6QL63 1104 aa24.97■■□□□ 1.59
ITGA6-204ENST00000412899 LMNB1P20700 586 aa24.97■■□□□ 1.59
ITGA6-204ENST00000412899 IL6STP40189 918 aaPredicted RBP24.97■■□□□ 1.59
ITGA6-204ENST00000412899 PHACTR3Q96KR7 559 aa24.97■■□□□ 1.59
ITGA6-204ENST00000412899 NUDCQ9Y266 331 aa24.97■■□□□ 1.59
ITGA6-204ENST00000412899 SBF1O95248 1867 aa24.97■■□□□ 1.59
ITGA6-204ENST00000412899 FSTL1Q12841 308 aa24.96■■□□□ 1.59
ITGA6-204ENST00000412899 CEMIPQ8WUJ3 1361 aa24.95■■□□□ 1.59
ITGA6-204ENST00000412899 ZC3H4Q9UPT8 1303 aaKnown RBP24.95■■□□□ 1.58
ITGA6-204ENST00000412899 A1BGP04217 495 aa24.95■■□□□ 1.58
ITGA6-204ENST00000412899 DNAJC5GQ8N7S2 189 aa24.95■■□□□ 1.58
ITGA6-204ENST00000412899 RSPH6AQ9H0K4 717 aa24.95■■□□□ 1.58
ITGA6-204ENST00000412899 SIPA1L3O60292 1781 aaPredicted RBP24.95■■□□□ 1.58
ITGA6-204ENST00000412899 DLEC1Q9Y238 1755 aa24.95■■□□□ 1.58
ITGA6-204ENST00000412899 PDE6BP35913 854 aa24.94■■□□□ 1.58
ITGA6-204ENST00000412899 ZNF622Q969S3 477 aaKnown RBP eCLIP24.94■■□□□ 1.58
ITGA6-204ENST00000412899 NPHP1O15259 732 aa24.93■■□□□ 1.58
ITGA6-204ENST00000412899 KCNQ3O43525 872 aa24.93■■□□□ 1.58
ITGA6-204ENST00000412899 CCDC24Q8N4L8 307 aa24.93■■□□□ 1.58
ITGA6-204ENST00000412899 BRIP1Q9BX63 1249 aa24.93■■□□□ 1.58
ITGA6-204ENST00000412899 PDZRN3Q9UPQ7 1066 aa24.93■■□□□ 1.58
ITGA6-204ENST00000412899 TNRC6CQ9HCJ0 1690 aaKnown RBP24.92■■□□□ 1.58
ITGA6-204ENST00000412899 U2AF1L5P0DN76 240 aaPredicted RBP24.92■■□□□ 1.58
ITGA6-204ENST00000412899 U2AF1Q01081 240 aaKnown RBP eCLIP24.92■■□□□ 1.58
ITGA6-204ENST00000412899 PRR5LQ6MZQ0 368 aa24.92■■□□□ 1.58
ITGA6-204ENST00000412899 RTF1Q92541 710 aaKnown RBP24.92■■□□□ 1.58
ITGA6-204ENST00000412899 PRELPP51888 382 aa24.91■■□□□ 1.58
ITGA6-204ENST00000412899 SETDB2Q96T68 719 aa24.91■■□□□ 1.58
ITGA6-204ENST00000412899 SCN7AQ01118 1682 aa24.91■■□□□ 1.58
ITGA6-204ENST00000412899 GLTPD2A6NH11 291 aa24.9■■□□□ 1.58
ITGA6-204ENST00000412899 DZIP3Q86Y13 1208 aaKnown RBP24.9■■□□□ 1.58
ITGA6-204ENST00000412899 ZNF219Q9P2Y4 722 aaPredicted RBP24.9■■□□□ 1.58
ITGA6-204ENST00000412899 USP16Q9Y5T5 823 aa24.9■■□□□ 1.58
ITGA6-204ENST00000412899 WDR90Q96KV7 1748 aa24.89■■□□□ 1.58
ITGA6-204ENST00000412899 NFKBIEO00221 500 aa24.89■■□□□ 1.58
ITGA6-204ENST00000412899 CAMTA2O94983 1202 aa24.89■■□□□ 1.58
ITGA6-204ENST00000412899 HTRA3P83110 453 aa24.89■■□□□ 1.58
ITGA6-204ENST00000412899 SMC1BQ8NDV3 1235 aa24.89■■□□□ 1.58
ITGA6-204ENST00000412899 C21orf2O43822 256 aa24.88■■□□□ 1.57
ITGA6-204ENST00000412899 VEGFAP15692 232 aaPredicted RBP24.88■■□□□ 1.57
ITGA6-204ENST00000412899 PPP2R1AP30153 589 aa24.88■■□□□ 1.57
ITGA6-204ENST00000412899 CNBD1Q8NA66 436 aa24.88■■□□□ 1.57
ITGA6-204ENST00000412899 PIP4K2AP48426 406 aaPredicted RBP24.87■■□□□ 1.57
ITGA6-204ENST00000412899 ST5P78524 1137 aa24.87■■□□□ 1.57
ITGA6-204ENST00000412899 MCM10Q7L590 875 aa24.87■■□□□ 1.57
ITGA6-204ENST00000412899 ANKRD31Q8N7Z5 1873 aa24.87■■□□□ 1.57
ITGA6-204ENST00000412899 SNRPA1P09661 255 aaKnown RBP24.86■■□□□ 1.57
ITGA6-204ENST00000412899 PRAMEF22A3QJZ6 481 aa24.85■■□□□ 1.57
ITGA6-204ENST00000412899 DPY19L2Q6NUT2 758 aa24.85■■□□□ 1.57
ITGA6-204ENST00000412899 KLRG1Q96E93 195 aa24.85■■□□□ 1.57
ITGA6-204ENST00000412899 DCTN1Q14203 1278 aa24.83■■□□□ 1.57
ITGA6-204ENST00000412899 CNKSR1Q969H4 720 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms