RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 POLRMTO00411 1230 aaKnown RBP22.28■■□□□ 1.16
SCAMP4-203ENST00000411971 COL15A1P39059 1388 aa22.26■■□□□ 1.15
SCAMP4-203ENST00000411971 GPBP1L1Q9HC44 474 aaPredicted RBP22.26■■□□□ 1.15
SCAMP4-203ENST00000411971 CHRNA5P30532 468 aa22.25■■□□□ 1.15
SCAMP4-203ENST00000411971 ZNF496Q96IT1 587 aaPredicted RBP22.25■■□□□ 1.15
SCAMP4-203ENST00000411971 RSPH6AQ9H0K4 717 aa22.25■■□□□ 1.15
SCAMP4-203ENST00000411971 SBF1O95248 1867 aa22.24■■□□□ 1.15
SCAMP4-203ENST00000411971 KCNQ3O43525 872 aa22.24■■□□□ 1.15
SCAMP4-203ENST00000411971 FCHSD2O94868 740 aa22.24■■□□□ 1.15
SCAMP4-203ENST00000411971 NFIXQ14938 502 aa22.24■■□□□ 1.15
SCAMP4-203ENST00000411971 GNAT3A8MTJ3 354 aa22.23■■□□□ 1.15
SCAMP4-203ENST00000411971 CANXP27824 592 aaKnown RBP22.23■■□□□ 1.15
SCAMP4-203ENST00000411971 PRKAR2BP31323 418 aa22.23■■□□□ 1.15
SCAMP4-203ENST00000411971 VSIG10Q8N0Z9 540 aa22.23■■□□□ 1.15
SCAMP4-203ENST00000411971 NARFQ9UHQ1 456 aa22.23■■□□□ 1.15
SCAMP4-203ENST00000411971 CEMIPQ8WUJ3 1361 aa22.23■■□□□ 1.15
SCAMP4-203ENST00000411971 DLEC1Q9Y238 1755 aa22.22■■□□□ 1.15
SCAMP4-203ENST00000411971 KIF3CO14782 793 aa22.22■■□□□ 1.15
SCAMP4-203ENST00000411971 PPP2R1AP30153 589 aa22.22■■□□□ 1.15
SCAMP4-203ENST00000411971 ARHGAP27Q6ZUM4 889 aa22.22■■□□□ 1.15
SCAMP4-203ENST00000411971 ANKRD31Q8N7Z5 1873 aa22.22■■□□□ 1.15
SCAMP4-203ENST00000411971 ZPR1O75312 459 aa22.21■■□□□ 1.15
SCAMP4-203ENST00000411971 CARMIL3Q8ND23 1372 aa22.21■■□□□ 1.15
SCAMP4-203ENST00000411971 HEG1Q9ULI3 1381 aa22.21■■□□□ 1.15
SCAMP4-203ENST00000411971 SCN7AQ01118 1682 aa22.2■■□□□ 1.15
SCAMP4-203ENST00000411971 EIF5P55010 431 aaKnown RBP22.2■■□□□ 1.14
SCAMP4-203ENST00000411971 ZNF790Q6PG37 636 aa22.2■■□□□ 1.14
SCAMP4-203ENST00000411971 GAS2L2Q8NHY3 880 aa22.2■■□□□ 1.14
SCAMP4-203ENST00000411971 TEFQ10587 303 aa22.18■■□□□ 1.14
SCAMP4-203ENST00000411971 PIM2Q9P1W9 311 aa22.18■■□□□ 1.14
SCAMP4-203ENST00000411971 DLG5Q8TDM6 1919 aa22.18■■□□□ 1.14
SCAMP4-203ENST00000411971 PRAMEF22A3QJZ6 481 aa22.17■■□□□ 1.14
SCAMP4-203ENST00000411971 TTC5Q8N0Z6 440 aa22.17■■□□□ 1.14
SCAMP4-203ENST00000411971 A1BGP04217 495 aa22.16■■□□□ 1.14
SCAMP4-203ENST00000411971 CCDC88AQ3V6T2 1871 aa22.15■■□□□ 1.14
SCAMP4-203ENST00000411971 BCORQ6W2J9 1755 aa22.15■■□□□ 1.14
SCAMP4-203ENST00000411971 COL11A2P13942 1736 aaPredicted RBP22.15■■□□□ 1.14
SCAMP4-203ENST00000411971 SERPINB2P05120 415 aa22.15■■□□□ 1.14
SCAMP4-203ENST00000411971 DCTN1Q14203 1278 aa22.15■■□□□ 1.14
SCAMP4-203ENST00000411971 DALRD3Q5D0E6 543 aaKnown RBP22.15■■□□□ 1.14
SCAMP4-203ENST00000411971 PIP4K2AP48426 406 aaPredicted RBP22.14■■□□□ 1.13
SCAMP4-203ENST00000411971 PRELPP51888 382 aa22.14■■□□□ 1.13
SCAMP4-203ENST00000411971 C9orf131Q5VYM1 1079 aa22.14■■□□□ 1.13
SCAMP4-203ENST00000411971 TBC1D9BQ66K14 1250 aa22.14■■□□□ 1.13
SCAMP4-203ENST00000411971 BICDL1Q6ZP65 573 aa22.14■■□□□ 1.13
SCAMP4-203ENST00000411971 MCM10Q7L590 875 aa22.14■■□□□ 1.13
SCAMP4-203ENST00000411971 NMRK2Q9NPI5 230 aa22.14■■□□□ 1.13
SCAMP4-203ENST00000411971 U2AF1L5P0DN76 240 aaPredicted RBP22.13■■□□□ 1.13
SCAMP4-203ENST00000411971 U2AF1Q01081 240 aaKnown RBP eCLIP22.13■■□□□ 1.13
SCAMP4-203ENST00000411971 CCDC24Q8N4L8 307 aa22.13■■□□□ 1.13
SCAMP4-203ENST00000411971 CFAP53Q96M91 514 aa22.13■■□□□ 1.13
SCAMP4-203ENST00000411971 TBC1D2BQ9UPU7 963 aa22.13■■□□□ 1.13
SCAMP4-203ENST00000411971 USP16Q9Y5T5 823 aa22.13■■□□□ 1.13
SCAMP4-203ENST00000411971 STARD3NLO95772 234 aa22.12■■□□□ 1.13
SCAMP4-203ENST00000411971 BTBD11A6QL63 1104 aa22.11■■□□□ 1.13
SCAMP4-203ENST00000411971 RASSF7Q02833 373 aa22.11■■□□□ 1.13
SCAMP4-203ENST00000411971 FMNL2Q96PY5 1086 aa22.11■■□□□ 1.13
SCAMP4-203ENST00000411971 ZNF330Q9Y3S2 320 aaPredicted RBP22.11■■□□□ 1.13
SCAMP4-203ENST00000411971 CACNA1SQ13698 1873 aa22.1■■□□□ 1.13
SCAMP4-203ENST00000411971 CAMTA2O94983 1202 aa22.08■■□□□ 1.13
SCAMP4-203ENST00000411971 HSPA6P17066 643 aa22.08■■□□□ 1.13
SCAMP4-203ENST00000411971 IL6STP40189 918 aaPredicted RBP22.08■■□□□ 1.13
SCAMP4-203ENST00000411971 NUDCQ9Y266 331 aa22.08■■□□□ 1.13
SCAMP4-203ENST00000411971 RNF181Q9P0P0 153 aa22.07■■□□□ 1.12
SCAMP4-203ENST00000411971 PRR5LQ6MZQ0 368 aa22.06■■□□□ 1.12
SCAMP4-203ENST00000411971 C2CD5Q86YS7 1000 aa22.06■■□□□ 1.12
SCAMP4-203ENST00000411971 TEX13AQ9BXU3 409 aaPredicted RBP22.06■■□□□ 1.12
SCAMP4-203ENST00000411971 MIS18AQ9NYP9 233 aa22.06■■□□□ 1.12
SCAMP4-203ENST00000411971 KDM3BQ7LBC6 1761 aa22.05■■□□□ 1.12
SCAMP4-203ENST00000411971 A0A087WZG4 1122 aa22.05■■□□□ 1.12
SCAMP4-203ENST00000411971 SLX4Q8IY92 1834 aa22.05■■□□□ 1.12
SCAMP4-203ENST00000411971 TIAM2Q8IVF5 1701 aa22.05■■□□□ 1.12
SCAMP4-203ENST00000411971 NBPF26B4DH59 902 aa22.04■■□□□ 1.12
SCAMP4-203ENST00000411971 NBPF10Q6P3W6 841 aaKnown RBP22.04■■□□□ 1.12
SCAMP4-203ENST00000411971 NBPF15Q8N660 670 aa22.04■■□□□ 1.12
SCAMP4-203ENST00000411971 FER1L6Q2WGJ9 1857 aa22.04■■□□□ 1.12
SCAMP4-203ENST00000411971 LAMB4A4D0S4 1761 aa22.03■■□□□ 1.12
SCAMP4-203ENST00000411971 NFKBIEO00221 500 aa22.03■■□□□ 1.12
SCAMP4-203ENST00000411971 PLEKHF1Q96S99 279 aa22.03■■□□□ 1.12
SCAMP4-203ENST00000411971 DZIP3Q86Y13 1208 aaKnown RBP22.02■■□□□ 1.12
SCAMP4-203ENST00000411971 TTLL6Q8N841 843 aa22.02■■□□□ 1.12
SCAMP4-203ENST00000411971 TNRC6CQ9HCJ0 1690 aaKnown RBP22.01■■□□□ 1.11
SCAMP4-203ENST00000411971 RTF1Q92541 710 aaKnown RBP22.01■■□□□ 1.11
SCAMP4-203ENST00000411971 TOMM70O94826 608 aa22■■□□□ 1.11
SCAMP4-203ENST00000411971 THUMPD2Q9BTF0 503 aaKnown RBP22■■□□□ 1.11
SCAMP4-203ENST00000411971 DICER1Q9UPY3 1922 aaKnown RBP22■■□□□ 1.11
SCAMP4-203ENST00000411971 ARFGEF2Q9Y6D5 1785 aa21.99■■□□□ 1.11
SCAMP4-203ENST00000411971 H0YIN7 160 aa21.99■■□□□ 1.11
SCAMP4-203ENST00000411971 SNRPA1P09661 255 aaKnown RBP21.99■■□□□ 1.11
SCAMP4-203ENST00000411971 RRAGCQ9HB90 399 aa21.99■■□□□ 1.11
SCAMP4-203ENST00000411971 ZNF219Q9P2Y4 722 aaPredicted RBP21.99■■□□□ 1.11
SCAMP4-203ENST00000411971 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
SCAMP4-203ENST00000411971 BRIP1Q9BX63 1249 aa21.98■■□□□ 1.11
SCAMP4-203ENST00000411971 TAF7Q15545 349 aaPredicted RBP21.97■■□□□ 1.11
SCAMP4-203ENST00000411971 ZNF622Q969S3 477 aaKnown RBP eCLIP21.97■■□□□ 1.11
SCAMP4-203ENST00000411971 WDR90Q96KV7 1748 aa21.97■■□□□ 1.11
SCAMP4-203ENST00000411971 SETDB2Q96T68 719 aa21.96■■□□□ 1.11
SCAMP4-203ENST00000411971 NUP98P52948 1817 aa21.96■■□□□ 1.11
SCAMP4-203ENST00000411971 C21orf2O43822 256 aa21.95■■□□□ 1.1
SCAMP4-203ENST00000411971 HTRA3P83110 453 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms