RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 CHRNA5P30532 468 aa12.35□□□□□ -0.43
MRPL48-204ENST00000411840 SLC39A6Q13433 755 aa12.35□□□□□ -0.43
MRPL48-204ENST00000411840 MTHFSDQ2M296 383 aaKnown RBP12.35□□□□□ -0.43
MRPL48-204ENST00000411840 KIF7Q2M1P5 1343 aa12.35□□□□□ -0.43
MRPL48-204ENST00000411840 PER1O15534 1290 aaPredicted RBP12.34□□□□□ -0.43
MRPL48-204ENST00000411840 DIAPH1O60610 1272 aaKnown RBP12.34□□□□□ -0.43
MRPL48-204ENST00000411840 APLP1P51693 650 aa12.34□□□□□ -0.43
MRPL48-204ENST00000411840 SOS1Q07889 1333 aaPredicted RBP12.34□□□□□ -0.43
MRPL48-204ENST00000411840 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
MRPL48-204ENST00000411840 NARFQ9UHQ1 456 aa12.33□□□□□ -0.44
MRPL48-204ENST00000411840 N4BP2Q86UW6 1770 aaPredicted RBP12.33□□□□□ -0.44
MRPL48-204ENST00000411840 NFIXQ14938 502 aa12.32□□□□□ -0.44
MRPL48-204ENST00000411840 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
MRPL48-204ENST00000411840 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
MRPL48-204ENST00000411840 DNAJC5GQ8N7S2 189 aa12.32□□□□□ -0.44
MRPL48-204ENST00000411840 RNF181Q9P0P0 153 aa12.32□□□□□ -0.44
MRPL48-204ENST00000411840 C16orf71Q8IYS4 520 aaPredicted RBP12.31□□□□□ -0.44
MRPL48-204ENST00000411840 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
MRPL48-204ENST00000411840 ZBTB1Q9Y2K1 713 aa12.31□□□□□ -0.44
MRPL48-204ENST00000411840 KDM2BQ8NHM5 1336 aa12.31□□□□□ -0.44
MRPL48-204ENST00000411840 TJP1Q07157 1748 aa12.31□□□□□ -0.44
MRPL48-204ENST00000411840 SERPINB2P05120 415 aa12.3□□□□□ -0.44
MRPL48-204ENST00000411840 CANXP27824 592 aaKnown RBP12.3□□□□□ -0.44
MRPL48-204ENST00000411840 RBM46Q8TBY0 533 aaKnown RBP12.3□□□□□ -0.44
MRPL48-204ENST00000411840 RRAGCQ9HB90 399 aa12.3□□□□□ -0.44
MRPL48-204ENST00000411840 COL15A1P39059 1388 aa12.3□□□□□ -0.44
MRPL48-204ENST00000411840 KCPQ6ZWJ8 1503 aa12.29□□□□□ -0.44
MRPL48-204ENST00000411840 STARD3NLO95772 234 aa12.29□□□□□ -0.44
MRPL48-204ENST00000411840 CNGB1Q14028 1251 aaPredicted RBP12.29□□□□□ -0.44
MRPL48-204ENST00000411840 TTC5Q8N0Z6 440 aa12.29□□□□□ -0.44
MRPL48-204ENST00000411840 MYH14Q7Z406 1995 aaKnown RBP12.29□□□□□ -0.44
MRPL48-204ENST00000411840 MRC1P22897 1456 aa12.28□□□□□ -0.44
MRPL48-204ENST00000411840 U2SURPO15042 1029 aaKnown RBP12.28□□□□□ -0.44
MRPL48-204ENST00000411840 EIF5P55010 431 aaKnown RBP12.28□□□□□ -0.44
MRPL48-204ENST00000411840 FSTL1Q12841 308 aa12.28□□□□□ -0.44
MRPL48-204ENST00000411840 IL17REQ8NFR9 667 aa12.28□□□□□ -0.44
MRPL48-204ENST00000411840 ADAMTS7Q9UKP4 1686 aa12.27□□□□□ -0.45
MRPL48-204ENST00000411840 A0A087WZG4 1122 aa12.27□□□□□ -0.45
MRPL48-204ENST00000411840 GNAT3A8MTJ3 354 aa12.27□□□□□ -0.45
MRPL48-204ENST00000411840 H0YIN7 160 aa12.27□□□□□ -0.45
MRPL48-204ENST00000411840 TEFQ10587 303 aa12.27□□□□□ -0.45
MRPL48-204ENST00000411840 BICDL1Q6ZP65 573 aa12.27□□□□□ -0.45
MRPL48-204ENST00000411840 C2CD5Q86YS7 1000 aa12.27□□□□□ -0.45
MRPL48-204ENST00000411840 TTLL6Q8N841 843 aa12.27□□□□□ -0.45
MRPL48-204ENST00000411840 ZNF496Q96IT1 587 aaPredicted RBP12.27□□□□□ -0.45
MRPL48-204ENST00000411840 SCN11AQ9UI33 1791 aa12.26□□□□□ -0.45
MRPL48-204ENST00000411840 RASSF7Q02833 373 aa12.26□□□□□ -0.45
MRPL48-204ENST00000411840 ZNF790Q6PG37 636 aa12.26□□□□□ -0.45
MRPL48-204ENST00000411840 TEX13AQ9BXU3 409 aaPredicted RBP12.26□□□□□ -0.45
MRPL48-204ENST00000411840 LMNB1P20700 586 aa12.25□□□□□ -0.45
MRPL48-204ENST00000411840 PRELPP51888 382 aa12.25□□□□□ -0.45
MRPL48-204ENST00000411840 HTRA3P83110 453 aa12.25□□□□□ -0.45
MRPL48-204ENST00000411840 GAS2L2Q8NHY3 880 aa12.25□□□□□ -0.45
MRPL48-204ENST00000411840 TBC1D2BQ9UPU7 963 aa12.25□□□□□ -0.45
MRPL48-204ENST00000411840 TBC1D9BQ66K14 1250 aa12.24□□□□□ -0.45
MRPL48-204ENST00000411840 BRIP1Q9BX63 1249 aa12.24□□□□□ -0.45
MRPL48-204ENST00000411840 HEG1Q9ULI3 1381 aa12.24□□□□□ -0.45
MRPL48-204ENST00000411840 ZC3H4Q9UPT8 1303 aaKnown RBP12.24□□□□□ -0.45
MRPL48-204ENST00000411840 ZNF330Q9Y3S2 320 aaPredicted RBP12.24□□□□□ -0.45
MRPL48-204ENST00000411840 BRCA1P38398 1863 aaKnown RBP12.23□□□□□ -0.45
MRPL48-204ENST00000411840 CARMIL3Q8ND23 1372 aa12.23□□□□□ -0.45
MRPL48-204ENST00000411840 NPC1L1Q9UHC9 1359 aa12.23□□□□□ -0.45
MRPL48-204ENST00000411840 GLTPD2A6NH11 291 aa12.23□□□□□ -0.45
MRPL48-204ENST00000411840 A1BGP04217 495 aa12.23□□□□□ -0.45
MRPL48-204ENST00000411840 VEGFAP15692 232 aaPredicted RBP12.23□□□□□ -0.45
MRPL48-204ENST00000411840 IL6STP40189 918 aaPredicted RBP12.23□□□□□ -0.45
MRPL48-204ENST00000411840 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
MRPL48-204ENST00000411840 PHACTR3Q96KR7 559 aa12.23□□□□□ -0.45
MRPL48-204ENST00000411840 FMNL2Q96PY5 1086 aa12.23□□□□□ -0.45
MRPL48-204ENST00000411840 COL3A1P02461 1466 aaPredicted RBP12.22□□□□□ -0.45
MRPL48-204ENST00000411840 NFKBIEO00221 500 aa12.22□□□□□ -0.45
MRPL48-204ENST00000411840 PDE6BP35913 854 aa12.22□□□□□ -0.45
MRPL48-204ENST00000411840 PRR5LQ6MZQ0 368 aa12.22□□□□□ -0.45
MRPL48-204ENST00000411840 NPM2Q86SE8 214 aaKnown RBP12.22□□□□□ -0.45
MRPL48-204ENST00000411840 SMC1BQ8NDV3 1235 aa12.22□□□□□ -0.45
MRPL48-204ENST00000411840 ZNF622Q969S3 477 aaKnown RBP eCLIP12.22□□□□□ -0.45
MRPL48-204ENST00000411840 KLRG1Q96E93 195 aa12.22□□□□□ -0.45
MRPL48-204ENST00000411840 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
MRPL48-204ENST00000411840 PDZRN3Q9UPQ7 1066 aa12.22□□□□□ -0.45
MRPL48-204ENST00000411840 ARFGEF1Q9Y6D6 1849 aa12.22□□□□□ -0.45
MRPL48-204ENST00000411840 BTBD11A6QL63 1104 aa12.21□□□□□ -0.45
MRPL48-204ENST00000411840 KCNQ3O43525 872 aa12.21□□□□□ -0.45
MRPL48-204ENST00000411840 C21orf2O43822 256 aa12.21□□□□□ -0.45
MRPL48-204ENST00000411840 PRKAR2BP31323 418 aa12.21□□□□□ -0.45
MRPL48-204ENST00000411840 JMYQ8N9B5 988 aa12.21□□□□□ -0.45
MRPL48-204ENST00000411840 CFAP53Q96M91 514 aa12.21□□□□□ -0.45
MRPL48-204ENST00000411840 SETDB2Q96T68 719 aa12.21□□□□□ -0.45
MRPL48-204ENST00000411840 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.45
MRPL48-204ENST00000411840 CEMIPQ8WUJ3 1361 aa12.2□□□□□ -0.46
MRPL48-204ENST00000411840 RSPH6AQ9H0K4 717 aa12.2□□□□□ -0.46
MRPL48-204ENST00000411840 NRXN2Q9P2S2 1712 aa12.2□□□□□ -0.46
MRPL48-204ENST00000411840 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
MRPL48-204ENST00000411840 DPY19L2Q6NUT2 758 aa12.19□□□□□ -0.46
MRPL48-204ENST00000411840 USP16Q9Y5T5 823 aa12.19□□□□□ -0.46
MRPL48-204ENST00000411840 POTECB2RU33 542 aa12.18□□□□□ -0.46
MRPL48-204ENST00000411840 NPHP1O15259 732 aa12.18□□□□□ -0.46
MRPL48-204ENST00000411840 ERFEQ4G0M1 354 aa12.18□□□□□ -0.46
MRPL48-204ENST00000411840 DZIP3Q86Y13 1208 aaKnown RBP12.18□□□□□ -0.46
MRPL48-204ENST00000411840 CNBD1Q8NA66 436 aa12.18□□□□□ -0.46
MRPL48-204ENST00000411840 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms