RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 CACNA2D4Q7Z3S7 1137 aa21.35■■□□□ 1.01
HCG11-201ENST00000411553 POLA1P09884 1462 aaPredicted RBP21.35■■□□□ 1.01
HCG11-201ENST00000411553 FOXO3O43524 673 aa21.35■■□□□ 1.01
HCG11-201ENST00000411553 SSRP1Q08945 709 aaKnown RBP21.35■■□□□ 1.01
HCG11-201ENST00000411553 KLHL10Q6JEL2 608 aa21.35■■□□□ 1.01
HCG11-201ENST00000411553 VPS36Q86VN1 386 aa21.35■■□□□ 1.01
HCG11-201ENST00000411553 WDR78Q5VTH9 848 aa21.35■■□□□ 1.01
HCG11-201ENST00000411553 A0A087WZG4 1122 aa21.34■■□□□ 1.01
HCG11-201ENST00000411553 CCDC194A0A1B0GVG4 234 aa21.34■■□□□ 1.01
HCG11-201ENST00000411553 FGFR1OPO95684 399 aaKnown RBP21.34■■□□□ 1.01
HCG11-201ENST00000411553 AMOTL2Q9Y2J4 779 aa21.34■■□□□ 1.01
HCG11-201ENST00000411553 SYCE3A1L190 88 aa21.34■■□□□ 1.01
HCG11-201ENST00000411553 F6X3S4 739 aa21.34■■□□□ 1.01
HCG11-201ENST00000411553 CCDC82Q8N4S0 544 aa21.34■■□□□ 1.01
HCG11-201ENST00000411553 NGLY1Q96IV0 654 aa21.34■■□□□ 1.01
HCG11-201ENST00000411553 CCDC102AQ96A19 550 aa21.34■■□□□ 1.01
HCG11-201ENST00000411553 IFIT3O14879 490 aaKnown RBP21.33■■□□□ 1.01
HCG11-201ENST00000411553 SYNJ1O43426 1573 aa21.33■■□□□ 1.01
HCG11-201ENST00000411553 GOLGA8AA7E2F4 631 aa21.33■■□□□ 1.01
HCG11-201ENST00000411553 GOLGA8BA8MQT2 603 aa21.33■■□□□ 1.01
HCG11-201ENST00000411553 KIF20AO95235 890 aa21.33■■□□□ 1.01
HCG11-201ENST00000411553 SFPQP23246 707 aaKnown RBP eCLIP21.33■■□□□ 1.01
HCG11-201ENST00000411553 NLRP5P59047 1200 aa21.33■■□□□ 1.01
HCG11-201ENST00000411553 CCDC97Q96F63 343 aaPredicted RBP21.33■■□□□ 1.01
HCG11-201ENST00000411553 EMILIN1Q9Y6C2 1016 aa21.33■■□□□ 1.01
HCG11-201ENST00000411553 TIAM1Q13009 1591 aa21.33■■□□□ 1.01
HCG11-201ENST00000411553 RARSP54136 660 aaKnown RBP21.33■■□□□ 1.01
HCG11-201ENST00000411553 CATIPQ7Z7H3 387 aa21.33■■□□□ 1
HCG11-201ENST00000411553 C6orf229H3BNL8 230 aa21.32■■□□□ 1
HCG11-201ENST00000411553 TEX13AQ9BXU3 409 aaPredicted RBP21.32■■□□□ 1
HCG11-201ENST00000411553 ZNF219Q9P2Y4 722 aaPredicted RBP21.32■■□□□ 1
HCG11-201ENST00000411553 WASLO00401 505 aaPredicted RBP21.32■■□□□ 1
HCG11-201ENST00000411553 CCDC184Q52MB2 194 aa21.32■■□□□ 1
HCG11-201ENST00000411553 CCDC150Q8NCX0 1101 aa21.32■■□□□ 1
HCG11-201ENST00000411553 CD109Q6YHK3 1445 aa21.32■■□□□ 1
HCG11-201ENST00000411553 ZSCAN12O43309 604 aa21.31■■□□□ 1
HCG11-201ENST00000411553 LRPPRCP42704 1394 aaKnown RBP21.31■■□□□ 1
HCG11-201ENST00000411553 GPTP24298 496 aa21.31■■□□□ 1
HCG11-201ENST00000411553 ANAPC15P60006 121 aa21.31■■□□□ 1
HCG11-201ENST00000411553 TAF3Q5VWG9 929 aa21.31■■□□□ 1
HCG11-201ENST00000411553 UBXN4Q92575 508 aa21.31■■□□□ 1
HCG11-201ENST00000411553 GUCY1B3Q02153 619 aa21.31■■□□□ 1
HCG11-201ENST00000411553 PLEKHH1Q9ULM0 1364 aa21.31■■□□□ 1
HCG11-201ENST00000411553 ZBTB3Q9H5J0 574 aa21.31■■□□□ 1
HCG11-201ENST00000411553 UQCRHLA0A096LP55 91 aa21.3■■□□□ 1
HCG11-201ENST00000411553 BAG4O95429 457 aaKnown RBP21.3■■□□□ 1
HCG11-201ENST00000411553 UQCRHP07919 91 aa21.3■■□□□ 1
HCG11-201ENST00000411553 TTF1Q15361 905 aaPredicted RBP21.3■■□□□ 1
HCG11-201ENST00000411553 CDC5LQ99459 802 aaKnown RBP21.3■■□□□ 1
HCG11-201ENST00000411553 KIF2AO00139 706 aaPredicted RBP21.3■■□□□ 1
HCG11-201ENST00000411553 LDHCP07864 332 aa21.3■■□□□ 1
HCG11-201ENST00000411553 CCDC183Q5T5S1 534 aa21.29■■□□□ 1
HCG11-201ENST00000411553 GBP3Q9H0R5 595 aa21.29■■□□□ 1
HCG11-201ENST00000411553 PTPRCP08575 1304 aa21.29■■□□□ 1
HCG11-201ENST00000411553 CCDC12Q8WUD4 166 aaPredicted RBP21.29■■□□□ 1
HCG11-201ENST00000411553 ARHGEF11O15085 1522 aa21.28■■□□□ 1
HCG11-201ENST00000411553 EVI5LQ96CN4 794 aa21.28■■□□□ 1
HCG11-201ENST00000411553 LIMCH1Q9UPQ0 1083 aa21.28■■□□□ 1
HCG11-201ENST00000411553 CDK13Q14004 1512 aaKnown RBP21.28■■□□□ 1
HCG11-201ENST00000411553 KIF5CO60282 957 aa21.28■■□□□ 1
HCG11-201ENST00000411553 TOP1P11387 765 aaKnown RBP21.28■■□□□ 1
HCG11-201ENST00000411553 PAXIP1Q6ZW49 1069 aaPredicted RBP21.28■■□□□ 1
HCG11-201ENST00000411553 CCDC91Q7Z6B0 441 aa21.28■■□□□ 1
HCG11-201ENST00000411553 FLIIQ13045 1269 aa21.27■■□□□ 1
HCG11-201ENST00000411553 IFNL2Q8IZJ0 200 aa21.27■■□□□ 1
HCG11-201ENST00000411553 CRACR2AQ9BSW2 395 aa21.27■■□□□ 1
HCG11-201ENST00000411553 CNNM3Q8NE01 707 aa21.27■■□□□ 1
HCG11-201ENST00000411553 FEZ1Q99689 392 aa21.27■■□□□ 1
HCG11-201ENST00000411553 NKTRP30414 1462 aaKnown RBP21.27■■□□□ 1
HCG11-201ENST00000411553 DDX46Q7L014 1031 aaKnown RBP21.27■■□□□ 1
HCG11-201ENST00000411553 MAP3K2Q9Y2U5 619 aa21.27■■□□□ 1
HCG11-201ENST00000411553 TTC21BQ7Z4L5 1316 aa21.27■■□□□ 1
HCG11-201ENST00000411553 KRT28Q7Z3Y7 464 aa21.27■■□□□ 1
HCG11-201ENST00000411553 CWC25Q9NXE8 425 aaPredicted RBP21.27■■□□□ 1
HCG11-201ENST00000411553 PRXQ9BXM0 1461 aa21.27■□□□□ 0.99
HCG11-201ENST00000411553 CTAGE5O15320 804 aa21.27■□□□□ 0.99
HCG11-201ENST00000411553 KIF5BP33176 963 aa21.26■□□□□ 0.99
HCG11-201ENST00000411553 LDHAL6AQ6ZMR3 332 aa21.26■□□□□ 0.99
HCG11-201ENST00000411553 BAG3O95817 575 aa21.26■□□□□ 0.99
HCG11-201ENST00000411553 MYCNP04198 464 aaPredicted RBP21.26■□□□□ 0.99
HCG11-201ENST00000411553 KIAA0586Q9BVV6 1533 aa21.26■□□□□ 0.99
HCG11-201ENST00000411553 MAGI1Q96QZ7 1491 aaPredicted RBP21.25■□□□□ 0.99
HCG11-201ENST00000411553 PTPN14Q15678 1187 aa21.25■□□□□ 0.99
HCG11-201ENST00000411553 PPP1R42Q7Z4L9 355 aa21.25■□□□□ 0.99
HCG11-201ENST00000411553 CABP5Q9NP86 173 aa21.25■□□□□ 0.99
HCG11-201ENST00000411553 CCT2P78371 535 aaKnown RBP21.25■□□□□ 0.99
HCG11-201ENST00000411553 ECHDC1Q9NTX5 307 aa21.25■□□□□ 0.99
HCG11-201ENST00000411553 PDE4BQ07343 736 aa21.25■□□□□ 0.99
HCG11-201ENST00000411553 CALML4Q96GE6 196 aa21.25■□□□□ 0.99
HCG11-201ENST00000411553 GOLIM4O00461 696 aa21.25■□□□□ 0.99
HCG11-201ENST00000411553 CETN1Q12798 172 aa21.24■□□□□ 0.99
HCG11-201ENST00000411553 LIG1P18858 919 aa21.24■□□□□ 0.99
HCG11-201ENST00000411553 CCDC178Q5BJE1 867 aa21.24■□□□□ 0.99
HCG11-201ENST00000411553 SPTY2D1Q68D10 685 aaPredicted RBP21.24■□□□□ 0.99
HCG11-201ENST00000411553 USO1O60763 962 aaKnown RBP21.24■□□□□ 0.99
HCG11-201ENST00000411553 CASQ1P31415 396 aa21.24■□□□□ 0.99
HCG11-201ENST00000411553 LUZP1Q86V48 1076 aa21.24■□□□□ 0.99
HCG11-201ENST00000411553 DYDC1Q8WWB3 177 aa21.24■□□□□ 0.99
HCG11-201ENST00000411553 NUP88Q99567 741 aaPredicted RBP21.24■□□□□ 0.99
HCG11-201ENST00000411553 AMPD3Q01432 767 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms