RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 BAG6P46379 1132 aa3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 EIF4G2P78344 907 aaKnown RBP eCLIP3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 TNP2Q05952 138 aa3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 ESCO1Q5FWF5 840 aa3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 SH3PXD2AQ5TCZ1 1133 aa3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 CD163Q86VB7 1156 aa3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 ZDHHC1Q8WTX9 485 aa3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 C7orf43Q8WVR3 580 aa3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 POM121Q96HA1 1249 aa3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 KRTAP4-8Q9BYQ9 185 aa3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 ATXN7L1Q9ULK2 861 aaPredicted RBP3.93□□□□□ -1.78
RNU2-55P-201ENST00000411146 A6NJY4 79 aa3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 C1QTNF9BB2RNN3 333 aa3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 ATXN7O15265 892 aaPredicted RBP3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 CSB-PGBD3P0DP91 1061 aa3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 CHRNA4P43681 627 aa3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 PCBP4P57723 403 aaKnown RBP3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 LBRQ14739 615 aaKnown RBP3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 DEPDC4Q8N2C3 294 aa3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 PGBD3Q8N328 593 aa3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 SLC4A9Q96Q91 983 aa3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 GDF2Q9UK05 429 aaPredicted RBP3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 MKL2Q9ULH7 1088 aa3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 PCDHGC4Q9Y5F7 938 aa3.92□□□□□ -1.78
RNU2-55P-201ENST00000411146 KHNYNO15037 678 aaKnown RBP3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 AMPD1P23109 780 aa3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 ARSJQ5FYB0 599 aaPredicted RBP3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 EFHC2Q5JST6 749 aa3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 TBC1D9Q6ZT07 1266 aa3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 ALYREFQ86V81 257 aaKnown RBP3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 TNS4Q8IZW8 715 aa3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 GOLGA6L1Q8N7Z2 621 aa3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 GAS2L2Q8NHY3 880 aa3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 ADAMTS19Q8TE59 1207 aa3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 TRIM11Q96F44 468 aa3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 PHF24Q9UPV7 400 aa3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 COG6Q9Y2V7 657 aa3.91□□□□□ -1.78
RNU2-55P-201ENST00000411146 POM121CA8CG34 1229 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 CDK2AP1O14519 115 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 ZBTB7BO15156 539 aaPredicted RBP3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 DGKGP49619 791 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 SFSWAPQ12872 951 aaKnown RBP3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 DOC2BQ14184 412 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 MCM6Q14566 821 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 MTFR1Q15390 333 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 SLCO4C1Q6ZQN7 724 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 C8orf86Q6ZUL3 223 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 CHSY3Q70JA7 882 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 Q8N3U1 123 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 NIFKQ9BYG3 293 aaKnown RBP3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 ALG2Q9H553 416 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 ZNF358Q9NW07 568 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 CABP1Q9NZU7 370 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 KIAA1024Q9UPX6 916 aa3.9□□□□□ -1.79
RNU2-55P-201ENST00000411146 ARAFP10398 606 aa3.89□□□□□ -1.79
RNU2-55P-201ENST00000411146 SKIP12755 728 aa3.89□□□□□ -1.79
RNU2-55P-201ENST00000411146 GTF2E1P29083 439 aaPredicted RBP3.89□□□□□ -1.79
RNU2-55P-201ENST00000411146 EPHA4P54764 986 aa3.89□□□□□ -1.79
RNU2-55P-201ENST00000411146 SEMA3FQ13275 785 aa3.89□□□□□ -1.79
RNU2-55P-201ENST00000411146 COL9A3Q14050 684 aaPredicted RBP3.89□□□□□ -1.79
RNU2-55P-201ENST00000411146 LRRC69Q6ZNQ3 347 aa3.89□□□□□ -1.79
RNU2-55P-201ENST00000411146 SLC30A3Q99726 388 aa3.89□□□□□ -1.79
RNU2-55P-201ENST00000411146 FAM229AH3BQW9 127 aa3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 EFSO43281 561 aa3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 LGR5O75473 907 aa3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 GTF2IP78347 998 aa3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 NCOA4Q13772 614 aa3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 MAP7D1Q3KQU3 841 aa3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 RAB44Q7Z6P3 723 aaPredicted RBP3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 NLRP8Q86W28 1048 aa3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 ZNF592Q92610 1267 aa3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 L3MBTL2Q969R5 705 aa3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 MDFIQ99750 246 aa3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 SCHIP1Q9P0W5 487 aaPredicted RBP3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 STARD13Q9Y3M8 1113 aa3.88□□□□□ -1.79
RNU2-55P-201ENST00000411146 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
RNU2-55P-201ENST00000411146 GNB5O14775 395 aa3.87□□□□□ -1.79
RNU2-55P-201ENST00000411146 NOS2P35228 1153 aa3.87□□□□□ -1.79
RNU2-55P-201ENST00000411146 ZNF280CQ8ND82 737 aa3.87□□□□□ -1.79
RNU2-55P-201ENST00000411146 PLVAPQ9BX97 442 aa3.87□□□□□ -1.79
RNU2-55P-201ENST00000411146 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
RNU2-55P-201ENST00000411146 HCN4Q9Y3Q4 1203 aa3.87□□□□□ -1.79
RNU2-55P-201ENST00000411146 APBB1O00213 710 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 EML1O00423 815 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 CLDN10P78369 228 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 WASHC4Q2M389 1173 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 FOXD4L6Q3SYB3 417 aaPredicted RBP3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 FAM182BQ5T319 152 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 FIGNL1Q6PIW4 674 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 FOXD4L3Q6VB84 417 aaPredicted RBP3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 BICDL1Q6ZP65 573 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 SYT9Q86SS6 491 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 SLC9A9Q8IVB4 645 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 SIRT1Q96EB6 747 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 HSH2DQ96JZ2 352 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 UCN2Q96RP3 112 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 ZDHHC3Q9NYG2 299 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 MARK1Q9P0L2 795 aa3.86□□□□□ -1.79
RNU2-55P-201ENST00000411146 DKK1O94907 266 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms