RNA–Protein interactions for RNA: ENST00000411066.1

RN7SKP259-201, Transcript of RNA, 7SK small nuclear pseudogene 259, humanhuman

BASIC

Gene RN7SKP259, Length 333 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP259-201ENST00000411066 LRRFIP2Q9Y608 721 aaKnown RBP13.33□□□□□ -0.28
RN7SKP259-201ENST00000411066 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
RN7SKP259-201ENST00000411066 SNRPA1P09661 255 aaKnown RBP13.32□□□□□ -0.28
RN7SKP259-201ENST00000411066 EVA1CP58658 441 aa13.32□□□□□ -0.28
RN7SKP259-201ENST00000411066 TTC22Q5TAA0 569 aa13.32□□□□□ -0.28
RN7SKP259-201ENST00000411066 SSH3Q8TE77 659 aa13.32□□□□□ -0.28
RN7SKP259-201ENST00000411066 FMNL2Q96PY5 1086 aa13.32□□□□□ -0.28
RN7SKP259-201ENST00000411066 OSBPL3Q9H4L5 887 aa13.32□□□□□ -0.28
RN7SKP259-201ENST00000411066 LAMB4A4D0S4 1761 aa13.32□□□□□ -0.28
RN7SKP259-201ENST00000411066 ROBO1Q9Y6N7 1651 aa13.31□□□□□ -0.28
RN7SKP259-201ENST00000411066 RAB11FIP3O75154 756 aa13.31□□□□□ -0.28
RN7SKP259-201ENST00000411066 CDC45O75419 566 aa13.31□□□□□ -0.28
RN7SKP259-201ENST00000411066 MYT1Q01538 1121 aa13.31□□□□□ -0.28
RN7SKP259-201ENST00000411066 SLC39A6Q13433 755 aa13.31□□□□□ -0.28
RN7SKP259-201ENST00000411066 POLA2Q14181 598 aa13.31□□□□□ -0.28
RN7SKP259-201ENST00000411066 PDIA6Q15084 440 aa13.31□□□□□ -0.28
RN7SKP259-201ENST00000411066 ZNF496Q96IT1 587 aaPredicted RBP13.31□□□□□ -0.28
RN7SKP259-201ENST00000411066 C22orf23Q9BZE7 217 aa13.31□□□□□ -0.28
RN7SKP259-201ENST00000411066 ERBB4Q15303 1308 aa13.31□□□□□ -0.28
RN7SKP259-201ENST00000411066 LTBP4Q8N2S1 1624 aa13.31□□□□□ -0.28
RN7SKP259-201ENST00000411066 SHANK3Q9BYB0 1731 aa13.3□□□□□ -0.28
RN7SKP259-201ENST00000411066 PNMA6EA0A0J9YXQ4 647 aa13.3□□□□□ -0.28
RN7SKP259-201ENST00000411066 ANXA1P04083 346 aa13.3□□□□□ -0.28
RN7SKP259-201ENST00000411066 MFAP1P55081 439 aaKnown RBP13.3□□□□□ -0.28
RN7SKP259-201ENST00000411066 PROSER3Q2NL68 480 aa13.3□□□□□ -0.28
RN7SKP259-201ENST00000411066 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
RN7SKP259-201ENST00000411066 LRRCC1Q9C099 1032 aa13.3□□□□□ -0.28
RN7SKP259-201ENST00000411066 MAP3K2Q9Y2U5 619 aa13.3□□□□□ -0.28
RN7SKP259-201ENST00000411066 UBR2Q8IWV8 1755 aa13.3□□□□□ -0.28
RN7SKP259-201ENST00000411066 PAPPAQ13219 1627 aa13.29□□□□□ -0.28
RN7SKP259-201ENST00000411066 PRAMEF22A3QJZ6 481 aa13.29□□□□□ -0.28
RN7SKP259-201ENST00000411066 GSPT1P15170 499 aaKnown RBP13.29□□□□□ -0.28
RN7SKP259-201ENST00000411066 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
RN7SKP259-201ENST00000411066 MTX1Q13505 466 aa13.29□□□□□ -0.28
RN7SKP259-201ENST00000411066 LARP1Q6PKG0 1096 aaKnown RBP13.29□□□□□ -0.28
RN7SKP259-201ENST00000411066 UTYO14607 1347 aa13.29□□□□□ -0.28
RN7SKP259-201ENST00000411066 GLI3P10071 1580 aa13.28□□□□□ -0.28
RN7SKP259-201ENST00000411066 SMARCA5O60264 1052 aaPredicted RBP13.28□□□□□ -0.28
RN7SKP259-201ENST00000411066 HSP90AB4PQ58FF6 505 aa13.28□□□□□ -0.28
RN7SKP259-201ENST00000411066 TBC1D9Q6ZT07 1266 aa13.28□□□□□ -0.28
RN7SKP259-201ENST00000411066 C16orf71Q8IYS4 520 aaPredicted RBP13.28□□□□□ -0.28
RN7SKP259-201ENST00000411066 STRN4Q9NRL3 753 aa13.28□□□□□ -0.28
RN7SKP259-201ENST00000411066 AOX1Q06278 1338 aa13.28□□□□□ -0.28
RN7SKP259-201ENST00000411066 SALL3Q9BXA9 1300 aa13.28□□□□□ -0.28
RN7SKP259-201ENST00000411066 PDE1AP54750 535 aa13.27□□□□□ -0.29
RN7SKP259-201ENST00000411066 PPP1R42Q7Z4L9 355 aa13.27□□□□□ -0.29
RN7SKP259-201ENST00000411066 STAP2Q9UGK3 403 aa13.27□□□□□ -0.29
RN7SKP259-201ENST00000411066 EXOC6BQ9Y2D4 811 aa13.27□□□□□ -0.29
RN7SKP259-201ENST00000411066 NBPF7P0C2Y1 421 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP259-201ENST00000411066 NEXNQ0ZGT2 675 aa13.26□□□□□ -0.29
RN7SKP259-201ENST00000411066 TNS2Q63HR2 1409 aa13.26□□□□□ -0.29
RN7SKP259-201ENST00000411066 CASC1Q6TDU7 716 aa13.26□□□□□ -0.29
RN7SKP259-201ENST00000411066 LRP10Q7Z4F1 713 aa13.26□□□□□ -0.29
RN7SKP259-201ENST00000411066 RIC3Q7Z5B4 369 aa13.26□□□□□ -0.29
RN7SKP259-201ENST00000411066 OTUD7AQ8TE49 926 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP259-201ENST00000411066 C9orf78Q9NZ63 289 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP259-201ENST00000411066 USP16Q9Y5T5 823 aa13.26□□□□□ -0.29
RN7SKP259-201ENST00000411066 PLCH1Q4KWH8 1693 aa13.25□□□□□ -0.29
RN7SKP259-201ENST00000411066 DISP2A7MBM2 1401 aa13.25□□□□□ -0.29
RN7SKP259-201ENST00000411066 APBB1O00213 710 aa13.25□□□□□ -0.29
RN7SKP259-201ENST00000411066 GRM8O00222 908 aa13.25□□□□□ -0.29
RN7SKP259-201ENST00000411066 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
RN7SKP259-201ENST00000411066 KIF1BPQ96EK5 621 aa13.25□□□□□ -0.29
RN7SKP259-201ENST00000411066 METTL22Q9BUU2 404 aaPredicted RBP13.25□□□□□ -0.29
RN7SKP259-201ENST00000411066 COL16A1Q07092 1604 aaPredicted RBP13.24□□□□□ -0.29
RN7SKP259-201ENST00000411066 KCPQ6ZWJ8 1503 aa13.24□□□□□ -0.29
RN7SKP259-201ENST00000411066 SRGAP3O43295 1099 aa13.24□□□□□ -0.29
RN7SKP259-201ENST00000411066 SDSP20132 328 aa13.24□□□□□ -0.29
RN7SKP259-201ENST00000411066 AIMP1Q12904 312 aaKnown RBP13.24□□□□□ -0.29
RN7SKP259-201ENST00000411066 COPS6Q7L5N1 327 aa13.24□□□□□ -0.29
RN7SKP259-201ENST00000411066 BTG4Q9NY30 223 aa13.24□□□□□ -0.29
RN7SKP259-201ENST00000411066 TUBGCP6Q96RT7 1819 aa13.24□□□□□ -0.29
RN7SKP259-201ENST00000411066 COL15A1P39059 1388 aa13.23□□□□□ -0.29
RN7SKP259-201ENST00000411066 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
RN7SKP259-201ENST00000411066 MYL6BP14649 208 aa13.23□□□□□ -0.29
RN7SKP259-201ENST00000411066 MX1P20591 662 aa13.23□□□□□ -0.29
RN7SKP259-201ENST00000411066 SLC4A3P48751 1232 aa13.23□□□□□ -0.29
RN7SKP259-201ENST00000411066 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
RN7SKP259-201ENST00000411066 ERC1Q8IUD2 1116 aa13.23□□□□□ -0.29
RN7SKP259-201ENST00000411066 LRP6O75581 1613 aa13.23□□□□□ -0.29
RN7SKP259-201ENST00000411066 TOGARAM1Q9Y4F4 1720 aa13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 NEURL1BA8MQ27 555 aa13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 IGKV5-2P06315 115 aa13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 CWF19L2Q2TBE0 894 aaKnown RBP13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 PLBD2Q8NHP8 589 aa13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 RHPN1Q8TCX5 695 aa13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 SNX21Q969T3 373 aa13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 TBC1D2Q9BYX2 928 aa13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 USP35Q9P2H5 1018 aa13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 WNK3Q9BYP7 1800 aa13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 ARFGEF2Q9Y6D5 1785 aa13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 PHLPP1O60346 1717 aa13.22□□□□□ -0.29
RN7SKP259-201ENST00000411066 GCKRQ14397 625 aa13.21□□□□□ -0.29
RN7SKP259-201ENST00000411066 CDCA7Q9BWT1 371 aaPredicted RBP13.21□□□□□ -0.29
RN7SKP259-201ENST00000411066 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
RN7SKP259-201ENST00000411066 USP42Q9H9J4 1324 aaKnown RBP13.2□□□□□ -0.3
RN7SKP259-201ENST00000411066 REC8O95072 547 aa13.2□□□□□ -0.3
RN7SKP259-201ENST00000411066 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
RN7SKP259-201ENST00000411066 SUCLG2Q96I99 432 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms