RNA–Protein interactions for RNA: ENST00000410804.1

RNU4-6P-201, Transcript of RNA, U4 small nuclear 6, pseudogene, humanhuman

BASIC

Gene RNU4-6P, Length 122 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-6P-201ENST00000410804 TMEM259Q4ZIN3 620 aa6.37□□□□□ -1.39
RNU4-6P-201ENST00000410804 KANK4Q5T7N3 995 aaPredicted RBP6.37□□□□□ -1.39
RNU4-6P-201ENST00000410804 CFDP1Q9UEE9 299 aaPredicted RBP6.37□□□□□ -1.39
RNU4-6P-201ENST00000410804 PCDHB9Q9Y5E1 797 aa6.37□□□□□ -1.39
RNU4-6P-201ENST00000410804 ZBBXA8MT70 800 aa6.36□□□□□ -1.39
RNU4-6P-201ENST00000410804 RHOQP17081 205 aa6.36□□□□□ -1.39
RNU4-6P-201ENST00000410804 RNF144AP50876 292 aaPredicted RBP6.36□□□□□ -1.39
RNU4-6P-201ENST00000410804 TRIM52Q96A61 297 aa6.36□□□□□ -1.39
RNU4-6P-201ENST00000410804 GOPCQ9HD26 462 aa6.36□□□□□ -1.39
RNU4-6P-201ENST00000410804 CUEDC1Q9NWM3 386 aaPredicted RBP6.36□□□□□ -1.39
RNU4-6P-201ENST00000410804 SUPT6HQ7KZ85 1726 aaKnown RBP6.36□□□□□ -1.39
RNU4-6P-201ENST00000410804 ABCA6Q8N139 1617 aa6.36□□□□□ -1.39
RNU4-6P-201ENST00000410804 MADDQ8WXG6 1647 aa6.36□□□□□ -1.39
RNU4-6P-201ENST00000410804 HECW2Q9P2P5 1572 aa6.35□□□□□ -1.39
RNU4-6P-201ENST00000410804 ZMYM4Q5VZL5 1548 aa6.35□□□□□ -1.39
RNU4-6P-201ENST00000410804 ZNF518AQ6AHZ1 1483 aa6.35□□□□□ -1.39
RNU4-6P-201ENST00000410804 ATP5J2-PTCD1G3V325 749 aa6.35□□□□□ -1.39
RNU4-6P-201ENST00000410804 ARHGEF15O94989 841 aa6.35□□□□□ -1.39
RNU4-6P-201ENST00000410804 ADAMTS2O95450 1211 aa6.35□□□□□ -1.39
RNU4-6P-201ENST00000410804 FBXO45P0C2W1 286 aa6.35□□□□□ -1.39
RNU4-6P-201ENST00000410804 GJD4Q96KN9 370 aaPredicted RBP6.35□□□□□ -1.39
RNU4-6P-201ENST00000410804 RIMS1Q86UR5 1692 aaKnown RBP6.35□□□□□ -1.39
RNU4-6P-201ENST00000410804 DIP2CQ9Y2E4 1556 aa6.35□□□□□ -1.39
RNU4-6P-201ENST00000410804 CAMSAP2Q08AD1 1489 aa6.34□□□□□ -1.39
RNU4-6P-201ENST00000410804 LRRC9Q6ZRR7 1453 aa6.34□□□□□ -1.39
RNU4-6P-201ENST00000410804 C9orf84Q5VXU9 1444 aa6.34□□□□□ -1.39
RNU4-6P-201ENST00000410804 BCORL1Q5H9F3 1711 aa6.34□□□□□ -1.39
RNU4-6P-201ENST00000410804 MEN1O00255 615 aa6.34□□□□□ -1.39
RNU4-6P-201ENST00000410804 MARSP56192 900 aaKnown RBP6.34□□□□□ -1.39
RNU4-6P-201ENST00000410804 LYPD4Q6UWN0 246 aa6.34□□□□□ -1.39
RNU4-6P-201ENST00000410804 IL27Q8NEV9 243 aa6.34□□□□□ -1.39
RNU4-6P-201ENST00000410804 SPAG9O60271 1321 aaKnown RBP6.33□□□□□ -1.4
RNU4-6P-201ENST00000410804 KDM5CP41229 1560 aa6.33□□□□□ -1.4
RNU4-6P-201ENST00000410804 A0A1W2PRU2 124 aa6.33□□□□□ -1.4
RNU4-6P-201ENST00000410804 IRS1P35568 1242 aa6.33□□□□□ -1.4
RNU4-6P-201ENST00000410804 SRSF11Q05519 484 aaKnown RBP6.33□□□□□ -1.4
RNU4-6P-201ENST00000410804 GAS6Q14393 721 aa6.33□□□□□ -1.4
RNU4-6P-201ENST00000410804 ATP10AO60312 1499 aa6.33□□□□□ -1.4
RNU4-6P-201ENST00000410804 ATP7AQ04656 1500 aa6.32□□□□□ -1.4
RNU4-6P-201ENST00000410804 SUZ12Q15022 739 aaKnown RBP6.32□□□□□ -1.4
RNU4-6P-201ENST00000410804 NEUROD2Q15784 382 aa6.32□□□□□ -1.4
RNU4-6P-201ENST00000410804 CC2D2BQ6DHV5 1058 aa6.32□□□□□ -1.4
RNU4-6P-201ENST00000410804 RIPOR1Q6ZS17 1223 aa6.32□□□□□ -1.4
RNU4-6P-201ENST00000410804 PTPRMP28827 1452 aa6.32□□□□□ -1.4
RNU4-6P-201ENST00000410804 ADAMTSL3P82987 1691 aa6.32□□□□□ -1.4
RNU4-6P-201ENST00000410804 MAGI2Q86UL8 1455 aa6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 GPR25O00155 361 aa6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 CELA2BP08218 269 aaPredicted RBP6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 GPC1P35052 558 aa6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 CEBPAP49715 358 aaPredicted RBP6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 ERVK-9P63128 1117 aa6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 MAP3K10Q02779 954 aa6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 POU4F2Q12837 409 aa6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 DBN1Q16643 649 aa6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 SLC27A3Q5K4L6 730 aa6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 RNF20Q5VTR2 975 aa6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 ZNF837Q96EG3 531 aaPredicted RBP6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 FER1L4A9Z1Z3 1794 aa6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 KIDINS220Q9ULH0 1771 aa6.31□□□□□ -1.4
RNU4-6P-201ENST00000410804 CCDC141Q6ZP82 1450 aa6.3□□□□□ -1.4
RNU4-6P-201ENST00000410804 PLEKHH2Q8IVE3 1493 aa6.3□□□□□ -1.4
RNU4-6P-201ENST00000410804 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
RNU4-6P-201ENST00000410804 CCDC125Q86Z20 511 aa6.3□□□□□ -1.4
RNU4-6P-201ENST00000410804 TRIM22Q8IYM9 498 aa6.3□□□□□ -1.4
RNU4-6P-201ENST00000410804 SCARF2Q96GP6 870 aaPredicted RBP6.3□□□□□ -1.4
RNU4-6P-201ENST00000410804 GMCL1Q96IK5 515 aa6.3□□□□□ -1.4
RNU4-6P-201ENST00000410804 NLRP3Q96P20 1036 aa6.3□□□□□ -1.4
RNU4-6P-201ENST00000410804 GAS2L1Q99501 681 aaPredicted RBP6.3□□□□□ -1.4
RNU4-6P-201ENST00000410804 KRTAP4-6Q9BYQ5 205 aa6.3□□□□□ -1.4
RNU4-6P-201ENST00000410804 INO80Q9ULG1 1556 aaPredicted RBP6.3□□□□□ -1.4
RNU4-6P-201ENST00000410804 MLH3Q9UHC1 1453 aa6.29□□□□□ -1.4
RNU4-6P-201ENST00000410804 SCTRP47872 440 aa6.29□□□□□ -1.4
RNU4-6P-201ENST00000410804 NR1H3Q13133 447 aa6.29□□□□□ -1.4
RNU4-6P-201ENST00000410804 MYOM3Q5VTT5 1437 aa6.29□□□□□ -1.4
RNU4-6P-201ENST00000410804 GGT6Q6P531 493 aa6.29□□□□□ -1.4
RNU4-6P-201ENST00000410804 FOXR1Q6PIV2 292 aa6.29□□□□□ -1.4
RNU4-6P-201ENST00000410804 ESF1Q9H501 851 aaKnown RBP6.29□□□□□ -1.4
RNU4-6P-201ENST00000410804 MBIPQ9NS73 344 aa6.29□□□□□ -1.4
RNU4-6P-201ENST00000410804 DYRK1BQ9Y463 629 aa6.29□□□□□ -1.4
RNU4-6P-201ENST00000410804 PCDHB11Q9Y5F2 797 aa6.29□□□□□ -1.4
RNU4-6P-201ENST00000410804 A2MP01023 1474 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 MBD5Q9P267 1494 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 KIAA1107Q9UPP5 1409 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 HSPA2P54652 639 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 MCCD1P59942 119 aaPredicted RBP6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 CLN3Q13286 438 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 FAM50AQ14320 339 aaKnown RBP6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 GPAT2Q6NUI2 795 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 KANK3Q6NY19 840 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 CYP2U1Q7Z449 544 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 GTPBP3Q969Y2 492 aaKnown RBP6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 GRIP2Q9C0E4 1043 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 ENAMQ9NRM1 1142 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 CHIC2Q9UKJ5 165 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 ZNF330Q9Y3S2 320 aaPredicted RBP6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 DNMT3AQ9Y6K1 912 aaPredicted RBP6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 PTPN23Q9H3S7 1636 aa6.28□□□□□ -1.4
RNU4-6P-201ENST00000410804 MAP3K1Q13233 1512 aa6.27□□□□□ -1.41
RNU4-6P-201ENST00000410804 H7C1W4 665 aa6.27□□□□□ -1.41
RNU4-6P-201ENST00000410804 ITGAEP38570 1179 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms