RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 FHDC1Q9C0D6 1143 aaPredicted RBP6.78□□□□□ -1.32
RNU2-28P-201ENST00000410457 UNCXA6NJT0 531 aa6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 ZIC2O95409 532 aaPredicted RBP6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 ZNF16P17020 682 aaPredicted RBP6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 FOXC1Q12948 553 aa6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 CBLBQ13191 982 aa6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 TBCELQ5QJ74 424 aa6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 COX20Q5RI15 118 aa6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 ALKBH2Q6NS38 261 aa6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 ZNF295-AS1Q8N0V1 137 aa6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 RBCK1Q9BYM8 510 aa6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 SAP130Q9H0E3 1048 aa6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 QTRT2Q9H974 415 aaKnown RBP6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 STIM2Q9P246 746 aa6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 USP3Q9Y6I4 520 aa6.77□□□□□ -1.33
RNU2-28P-201ENST00000410457 SERTM1A2A2V5 107 aa6.76□□□□□ -1.33
RNU2-28P-201ENST00000410457 EML1O00423 815 aa6.76□□□□□ -1.33
RNU2-28P-201ENST00000410457 TNFRSF10BO14763 440 aa6.76□□□□□ -1.33
RNU2-28P-201ENST00000410457 NDUFB5O43674 189 aa6.76□□□□□ -1.33
RNU2-28P-201ENST00000410457 MPSTP25325 297 aa6.76□□□□□ -1.33
RNU2-28P-201ENST00000410457 WDR4P57081 412 aaKnown RBP6.76□□□□□ -1.33
RNU2-28P-201ENST00000410457 CENPCQ03188 943 aa6.76□□□□□ -1.33
RNU2-28P-201ENST00000410457 PPARGC1BQ86YN6 1023 aaKnown RBP6.76□□□□□ -1.33
RNU2-28P-201ENST00000410457 NLRP3Q96P20 1036 aa6.76□□□□□ -1.33
RNU2-28P-201ENST00000410457 CITED4Q96RK1 184 aa6.76□□□□□ -1.33
RNU2-28P-201ENST00000410457 PRKD2Q9BZL6 878 aa6.76□□□□□ -1.33
RNU2-28P-201ENST00000410457 TTC24A2A3L6 582 aaPredicted RBP6.75□□□□□ -1.33
RNU2-28P-201ENST00000410457 GDF9O60383 454 aa6.75□□□□□ -1.33
RNU2-28P-201ENST00000410457 TIMP2P16035 220 aa6.75□□□□□ -1.33
RNU2-28P-201ENST00000410457 TREML4Q6UXN2 200 aa6.75□□□□□ -1.33
RNU2-28P-201ENST00000410457 FBXO33Q7Z6M2 555 aa6.75□□□□□ -1.33
RNU2-28P-201ENST00000410457 CYP4X1Q8N118 509 aa6.75□□□□□ -1.33
RNU2-28P-201ENST00000410457 ABTB2Q8N961 1025 aa6.75□□□□□ -1.33
RNU2-28P-201ENST00000410457 GIPC2Q8TF65 315 aa6.75□□□□□ -1.33
RNU2-28P-201ENST00000410457 ZFAND3Q9H8U3 227 aa6.75□□□□□ -1.33
RNU2-28P-201ENST00000410457 TOR4AQ9NXH8 423 aa6.75□□□□□ -1.33
RNU2-28P-201ENST00000410457 J3QL48 77 aa6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 GPC1P35052 558 aa6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 NOS2P35228 1153 aa6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 EIF1AXP47813 144 aaKnown RBP6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 RTN1Q16799 776 aa6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 ZNF326Q5BKZ1 582 aaKnown RBP6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 MEIOBQ8N635 442 aa6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 ZDHHC1Q8WTX9 485 aa6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 NIFKQ9BYG3 293 aaKnown RBP6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 BRPF3Q9ULD4 1205 aa6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 LRFN2Q9ULH4 789 aa6.74□□□□□ -1.33
RNU2-28P-201ENST00000410457 MEN1O00255 615 aa6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 BRD2P25440 801 aaKnown RBP6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 PRR20EP86478 221 aa6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 PRR20CP86479 221 aa6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 PRR20DP86480 221 aa6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 PRR20BP86481 221 aa6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 PRR20AP86496 221 aa6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 ALDH16A1Q8IZ83 802 aa6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 RHBDD1Q8TEB9 315 aa6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 L3MBTL2Q969R5 705 aa6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 MRRFQ96E11 262 aaKnown RBP6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 AGBL1Q96MI9 1066 aa6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 ZSCAN10Q96SZ4 725 aaPredicted RBP6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 CABP1Q9NZU7 370 aa6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 KIAA1522Q9P206 1035 aaPredicted RBP6.73□□□□□ -1.33
RNU2-28P-201ENST00000410457 FZD6O60353 706 aa6.72□□□□□ -1.33
RNU2-28P-201ENST00000410457 SMPD1P17405 629 aa6.72□□□□□ -1.33
RNU2-28P-201ENST00000410457 VAMP1P23763 118 aa6.72□□□□□ -1.33
RNU2-28P-201ENST00000410457 GTF2E1P29083 439 aaPredicted RBP6.72□□□□□ -1.33
RNU2-28P-201ENST00000410457 RELBQ01201 579 aa6.72□□□□□ -1.33
RNU2-28P-201ENST00000410457 C1orf53Q5VUE5 145 aa6.72□□□□□ -1.33
RNU2-28P-201ENST00000410457 TMC7Q7Z402 723 aa6.72□□□□□ -1.33
RNU2-28P-201ENST00000410457 DMRTB1Q96MA1 342 aa6.72□□□□□ -1.33
RNU2-28P-201ENST00000410457 IGSF5Q9NSI5 407 aa6.72□□□□□ -1.33
RNU2-28P-201ENST00000410457 ZNF232Q9UNY5 417 aa6.72□□□□□ -1.33
RNU2-28P-201ENST00000410457 TREHO43280 583 aa6.71□□□□□ -1.34
RNU2-28P-201ENST00000410457 PDE3BQ13370 1112 aa6.71□□□□□ -1.34
RNU2-28P-201ENST00000410457 C11orf91Q3C1V1 193 aa6.71□□□□□ -1.34
RNU2-28P-201ENST00000410457 SH3PXD2AQ5TCZ1 1133 aa6.71□□□□□ -1.34
RNU2-28P-201ENST00000410457 TMEM214Q6NUQ4 689 aaKnown RBP6.71□□□□□ -1.34
RNU2-28P-201ENST00000410457 TSEN34Q9BSV6 310 aaKnown RBP6.71□□□□□ -1.34
RNU2-28P-201ENST00000410457 GRIP2Q9C0E4 1043 aa6.71□□□□□ -1.34
RNU2-28P-201ENST00000410457 PDZRN3Q9UPQ7 1066 aa6.71□□□□□ -1.34
RNU2-28P-201ENST00000410457 RNF144AP50876 292 aaPredicted RBP6.7□□□□□ -1.34
RNU2-28P-201ENST00000410457 FMR1Q06787 632 aaKnown RBP eCLIP6.7□□□□□ -1.34
RNU2-28P-201ENST00000410457 EAPPQ56P03 285 aaPredicted RBP6.7□□□□□ -1.34
RNU2-28P-201ENST00000410457 GNASQ5JWF2 1037 aa6.7□□□□□ -1.34
RNU2-28P-201ENST00000410457 NGLY1Q96IV0 654 aa6.7□□□□□ -1.34
RNU2-28P-201ENST00000410457 FAM129BQ96TA1 746 aa6.7□□□□□ -1.34
RNU2-28P-201ENST00000410457 PHACTR1Q9C0D0 580 aa6.7□□□□□ -1.34
RNU2-28P-201ENST00000410457 BCL11AQ9H165 835 aa6.7□□□□□ -1.34
RNU2-28P-201ENST00000410457 ZNF395Q9H8N7 513 aaPredicted RBP6.7□□□□□ -1.34
RNU2-28P-201ENST00000410457 TNFRSF10AO00220 468 aa6.69□□□□□ -1.34
RNU2-28P-201ENST00000410457 SPINT1O43278 529 aa6.69□□□□□ -1.34
RNU2-28P-201ENST00000410457 IGHA2P01877 340 aa6.69□□□□□ -1.34
RNU2-28P-201ENST00000410457 USP5P45974 858 aa6.69□□□□□ -1.34
RNU2-28P-201ENST00000410457 FGD1P98174 961 aa6.69□□□□□ -1.34
RNU2-28P-201ENST00000410457 DGKZQ13574 1117 aa6.69□□□□□ -1.34
RNU2-28P-201ENST00000410457 AAMPQ13685 434 aa6.69□□□□□ -1.34
RNU2-28P-201ENST00000410457 HIF1AQ16665 826 aa6.69□□□□□ -1.34
RNU2-28P-201ENST00000410457 ALKBH8Q96BT7 664 aaKnown RBP6.69□□□□□ -1.34
RNU2-28P-201ENST00000410457 CCDC87Q9NVE4 849 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms