RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 KIAA1024Q9UPX6 916 aa7.57□□□□□ -1.2
LSM5-205ENST00000409952 EPHA4P54764 986 aa7.56□□□□□ -1.2
LSM5-205ENST00000409952 TMEM164Q5U3C3 297 aa7.56□□□□□ -1.2
LSM5-205ENST00000409952 FAM177A1Q8N128 213 aaPredicted RBP7.56□□□□□ -1.2
LSM5-205ENST00000409952 LARGE2Q8N3Y3 721 aa7.56□□□□□ -1.2
LSM5-205ENST00000409952 GMCL1Q96IK5 515 aa7.56□□□□□ -1.2
LSM5-205ENST00000409952 CUEDC1Q9NWM3 386 aaPredicted RBP7.56□□□□□ -1.2
LSM5-205ENST00000409952 MKRN1Q9UHC7 482 aaKnown RBP7.56□□□□□ -1.2
LSM5-205ENST00000409952 CDK2AP1O14519 115 aa7.55□□□□□ -1.2
LSM5-205ENST00000409952 ARID4AP29374 1257 aaPredicted RBP7.55□□□□□ -1.2
LSM5-205ENST00000409952 ATP1A2P50993 1020 aa7.55□□□□□ -1.2
LSM5-205ENST00000409952 FOXK2Q01167 660 aa7.55□□□□□ -1.2
LSM5-205ENST00000409952 TLR1Q15399 786 aa7.55□□□□□ -1.2
LSM5-205ENST00000409952 C4orf17Q53FE4 359 aa7.55□□□□□ -1.2
LSM5-205ENST00000409952 SIX5Q8N196 739 aa7.55□□□□□ -1.2
LSM5-205ENST00000409952 RHBDD1Q8TEB9 315 aa7.55□□□□□ -1.2
LSM5-205ENST00000409952 ZNF358Q9NW07 568 aa7.55□□□□□ -1.2
LSM5-205ENST00000409952 ZMIZ1Q9ULJ6 1067 aa7.55□□□□□ -1.2
LSM5-205ENST00000409952 A6NJY4 79 aa7.54□□□□□ -1.2
LSM5-205ENST00000409952 M0R2N6 131 aa7.54□□□□□ -1.2
LSM5-205ENST00000409952 ZNF16P17020 682 aaPredicted RBP7.54□□□□□ -1.2
LSM5-205ENST00000409952 KRT76Q01546 638 aa7.54□□□□□ -1.2
LSM5-205ENST00000409952 PHLDB3Q6NSJ2 640 aa7.54□□□□□ -1.2
LSM5-205ENST00000409952 TRIM22Q8IYM9 498 aa7.54□□□□□ -1.2
LSM5-205ENST00000409952 STK32AQ8WU08 396 aa7.54□□□□□ -1.2
LSM5-205ENST00000409952 BACH1O14867 736 aa7.53□□□□□ -1.2
LSM5-205ENST00000409952 THBS1P07996 1170 aa7.53□□□□□ -1.2
LSM5-205ENST00000409952 TCF3P15923 654 aa7.53□□□□□ -1.2
LSM5-205ENST00000409952 GNASQ5JWF2 1037 aa7.53□□□□□ -1.2
LSM5-205ENST00000409952 OGFOD1Q8N543 542 aa7.53□□□□□ -1.2
LSM5-205ENST00000409952 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.53□□□□□ -1.2
LSM5-205ENST00000409952 BCL2L13Q9BXK5 485 aa7.53□□□□□ -1.2
LSM5-205ENST00000409952 TIMMDC1Q9NPL8 285 aa7.53□□□□□ -1.2
LSM5-205ENST00000409952 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
LSM5-205ENST00000409952 NOVA2Q9UNW9 492 aaKnown RBP7.53□□□□□ -1.2
LSM5-205ENST00000409952 USP3Q9Y6I4 520 aa7.53□□□□□ -1.2
LSM5-205ENST00000409952 A0A1B0GTH6 734 aa7.52□□□□□ -1.21
LSM5-205ENST00000409952 F11P03951 625 aa7.52□□□□□ -1.21
LSM5-205ENST00000409952 DBN1Q16643 649 aa7.52□□□□□ -1.21
LSM5-205ENST00000409952 CCDC102BQ68D86 513 aa7.52□□□□□ -1.21
LSM5-205ENST00000409952 POTEAQ6S8J7 498 aa7.52□□□□□ -1.21
LSM5-205ENST00000409952 SCHIP1Q9P0W5 487 aaPredicted RBP7.52□□□□□ -1.21
LSM5-205ENST00000409952 SOWAHDA6NJG2 315 aa7.51□□□□□ -1.21
LSM5-205ENST00000409952 SSFA2P28290 1259 aa7.51□□□□□ -1.21
LSM5-205ENST00000409952 PTK7Q13308 1070 aa7.51□□□□□ -1.21
LSM5-205ENST00000409952 UBAP2LQ14157 1087 aaKnown RBP7.51□□□□□ -1.21
LSM5-205ENST00000409952 TMEM214Q6NUQ4 689 aaKnown RBP7.51□□□□□ -1.21
LSM5-205ENST00000409952 SV2AQ7L0J3 742 aa7.51□□□□□ -1.21
LSM5-205ENST00000409952 VWA5B2Q8N398 1253 aa7.51□□□□□ -1.21
LSM5-205ENST00000409952 TPCN2Q8NHX9 752 aa7.51□□□□□ -1.21
LSM5-205ENST00000409952 ZNF837Q96EG3 531 aaPredicted RBP7.51□□□□□ -1.21
LSM5-205ENST00000409952 SERTAD1Q9UHV2 236 aa7.51□□□□□ -1.21
LSM5-205ENST00000409952 FAM196BA6NMK8 535 aa7.5□□□□□ -1.21
LSM5-205ENST00000409952 NOM1Q5C9Z4 860 aaKnown RBP7.5□□□□□ -1.21
LSM5-205ENST00000409952 C8orf37Q96NL8 207 aa7.5□□□□□ -1.21
LSM5-205ENST00000409952 NIFKQ9BYG3 293 aaKnown RBP7.5□□□□□ -1.21
LSM5-205ENST00000409952 H7C1W4 665 aa7.49□□□□□ -1.21
LSM5-205ENST00000409952 RASA1P20936 1047 aa7.49□□□□□ -1.21
LSM5-205ENST00000409952 MSX1P28360 303 aa7.49□□□□□ -1.21
LSM5-205ENST00000409952 MARSP56192 900 aaKnown RBP7.49□□□□□ -1.21
LSM5-205ENST00000409952 PSME1Q06323 249 aa7.49□□□□□ -1.21
LSM5-205ENST00000409952 LBRQ14739 615 aaKnown RBP7.49□□□□□ -1.21
LSM5-205ENST00000409952 CRTC2Q53ET0 693 aaPredicted RBP7.49□□□□□ -1.21
LSM5-205ENST00000409952 RNFT1Q5M7Z0 435 aa7.49□□□□□ -1.21
LSM5-205ENST00000409952 ZSCAN1Q8NBB4 408 aa7.49□□□□□ -1.21
LSM5-205ENST00000409952 C1orf216Q8TAB5 229 aa7.49□□□□□ -1.21
LSM5-205ENST00000409952 GIPC2Q8TF65 315 aa7.49□□□□□ -1.21
LSM5-205ENST00000409952 CRISPLD1Q9H336 500 aa7.49□□□□□ -1.21
LSM5-205ENST00000409952 ATP4AP20648 1035 aa7.48□□□□□ -1.21
LSM5-205ENST00000409952 GTF2E1P29083 439 aaPredicted RBP7.48□□□□□ -1.21
LSM5-205ENST00000409952 PHKA2P46019 1235 aa7.48□□□□□ -1.21
LSM5-205ENST00000409952 GAS6Q14393 721 aa7.48□□□□□ -1.21
LSM5-205ENST00000409952 TEAD4Q15561 434 aa7.48□□□□□ -1.21
LSM5-205ENST00000409952 ZDHHC1Q8WTX9 485 aa7.48□□□□□ -1.21
LSM5-205ENST00000409952 DRC1Q96MC2 740 aa7.48□□□□□ -1.21
LSM5-205ENST00000409952 CANXP27824 592 aaKnown RBP7.47□□□□□ -1.21
LSM5-205ENST00000409952 TNS4Q8IZW8 715 aa7.47□□□□□ -1.21
LSM5-205ENST00000409952 C7orf43Q8WVR3 580 aa7.47□□□□□ -1.21
LSM5-205ENST00000409952 SREK1Q8WXA9 508 aaKnown RBP7.47□□□□□ -1.21
LSM5-205ENST00000409952 GAS2L1Q99501 681 aaPredicted RBP7.47□□□□□ -1.21
LSM5-205ENST00000409952 COL25A1Q9BXS0 654 aaPredicted RBP7.47□□□□□ -1.21
LSM5-205ENST00000409952 ZDHHC3Q9NYG2 299 aa7.47□□□□□ -1.21
LSM5-205ENST00000409952 CDC14CA4D256 554 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L15C9J2P7 530 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L10C9JJH3 530 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L13C9JLJ4 530 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L12C9JPN9 530 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L11C9JVI0 530 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L21D6R901 530 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L18D6R9N7 530 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L22D6RA61 530 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L17D6RBQ6 530 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L19D6RCP7 530 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L20D6RJB6 530 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 SLURP2P0DP57 97 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 VAMP1P23763 118 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 PLA2G4AP47712 749 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 HIRAP54198 1017 aaPredicted RBP7.46□□□□□ -1.22
LSM5-205ENST00000409952 SEC13P55735 322 aa7.46□□□□□ -1.22
LSM5-205ENST00000409952 USP17L24Q0WX57 530 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms