RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 RAB11FIP3O75154 756 aa9.52□□□□□ -0.88
EPHA4-203ENST00000409938 RAD50Q92878 1312 aa9.52□□□□□ -0.89
EPHA4-203ENST00000409938 MCCP23508 829 aa9.52□□□□□ -0.89
EPHA4-203ENST00000409938 ANP32BQ92688 251 aaKnown RBP9.52□□□□□ -0.89
EPHA4-203ENST00000409938 ZKSCAN5Q9Y2L8 839 aa9.52□□□□□ -0.89
EPHA4-203ENST00000409938 SYCE3A1L190 88 aa9.52□□□□□ -0.89
EPHA4-203ENST00000409938 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.52□□□□□ -0.89
EPHA4-203ENST00000409938 KIAA1211Q6ZU35 1233 aa9.52□□□□□ -0.89
EPHA4-203ENST00000409938 FKBP5Q13451 457 aaPredicted RBP9.51□□□□□ -0.89
EPHA4-203ENST00000409938 TAF7Q15545 349 aaPredicted RBP9.51□□□□□ -0.89
EPHA4-203ENST00000409938 KCNB2Q92953 911 aa9.51□□□□□ -0.89
EPHA4-203ENST00000409938 LSG1Q9H089 658 aaKnown RBP9.51□□□□□ -0.89
EPHA4-203ENST00000409938 SGSM2O43147 1006 aa9.51□□□□□ -0.89
EPHA4-203ENST00000409938 AMOTL2Q9Y2J4 779 aa9.51□□□□□ -0.89
EPHA4-203ENST00000409938 HOXB7P09629 217 aa9.5□□□□□ -0.89
EPHA4-203ENST00000409938 OVOS2A0A0G2JMS6 1433 aa9.5□□□□□ -0.89
EPHA4-203ENST00000409938 NCLP19338 710 aaKnown RBP9.5□□□□□ -0.89
EPHA4-203ENST00000409938 HSP90AA2PQ14568 343 aaPredicted RBP9.5□□□□□ -0.89
EPHA4-203ENST00000409938 ANO2Q9NQ90 1003 aa9.5□□□□□ -0.89
EPHA4-203ENST00000409938 MTX1Q13505 466 aa9.5□□□□□ -0.89
EPHA4-203ENST00000409938 MSNP26038 577 aaKnown RBP9.49□□□□□ -0.89
EPHA4-203ENST00000409938 SNX14Q9Y5W7 946 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 FER1L4A9Z1Z3 1794 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 WDR33Q9C0J8 1336 aaKnown RBP9.49□□□□□ -0.89
EPHA4-203ENST00000409938 ADGRL3Q9HAR2 1447 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 NUTM2FA1L443 756 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 UBTFL1P0CB47 393 aaPredicted RBP9.49□□□□□ -0.89
EPHA4-203ENST00000409938 AMPHP49418 695 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 BEND3Q5T5X7 828 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 HEG1Q9ULI3 1381 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 MRC1P22897 1456 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 ADCY9O60503 1353 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 GADD45BO75293 160 aaPredicted RBP9.49□□□□□ -0.89
EPHA4-203ENST00000409938 PPP1R42Q7Z4L9 355 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 RHPN1Q8TCX5 695 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 RILPL2Q969X0 211 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 PHAXQ9H814 394 aaKnown RBP9.49□□□□□ -0.89
EPHA4-203ENST00000409938 CCDC39Q9UFE4 941 aa9.49□□□□□ -0.89
EPHA4-203ENST00000409938 EIF4A1P60842 406 aaKnown RBP9.48□□□□□ -0.89
EPHA4-203ENST00000409938 USP48Q86UV5 1035 aa9.48□□□□□ -0.89
EPHA4-203ENST00000409938 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
EPHA4-203ENST00000409938 TRIM6-TRIM34B2RNG4 842 aa9.48□□□□□ -0.89
EPHA4-203ENST00000409938 SLC26A8Q96RN1 970 aa9.48□□□□□ -0.89
EPHA4-203ENST00000409938 TSPY26PQ9H489 355 aa9.48□□□□□ -0.89
EPHA4-203ENST00000409938 UVSSAQ2YD98 709 aa9.47□□□□□ -0.89
EPHA4-203ENST00000409938 RUFY3Q7L099 469 aa9.47□□□□□ -0.89
EPHA4-203ENST00000409938 FUCA2Q9BTY2 467 aa9.47□□□□□ -0.89
EPHA4-203ENST00000409938 UPF3BQ9BZI7 483 aaKnown RBP9.47□□□□□ -0.89
EPHA4-203ENST00000409938 PDCL3Q9H2J4 239 aa9.47□□□□□ -0.89
EPHA4-203ENST00000409938 SNRKQ9NRH2 765 aa9.47□□□□□ -0.89
EPHA4-203ENST00000409938 TTC41PQ6P2S7 1318 aa9.47□□□□□ -0.89
EPHA4-203ENST00000409938 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
EPHA4-203ENST00000409938 KIF1BPQ96EK5 621 aa9.47□□□□□ -0.89
EPHA4-203ENST00000409938 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
EPHA4-203ENST00000409938 IL1RAPL2Q9NP60 686 aa9.47□□□□□ -0.89
EPHA4-203ENST00000409938 SOX12O15370 315 aa9.46□□□□□ -0.89
EPHA4-203ENST00000409938 NBPF7P0C2Y1 421 aaPredicted RBP9.46□□□□□ -0.89
EPHA4-203ENST00000409938 HDGFL1Q5TGJ6 251 aa9.46□□□□□ -0.89
EPHA4-203ENST00000409938 SYAP1Q96A49 352 aaPredicted RBP9.46□□□□□ -0.89
EPHA4-203ENST00000409938 SLIT3O75094 1523 aa9.46□□□□□ -0.89
EPHA4-203ENST00000409938 ZSCAN22P10073 491 aaPredicted RBP9.46□□□□□ -0.9
EPHA4-203ENST00000409938 CSPP1Q1MSJ5 1256 aa9.46□□□□□ -0.9
EPHA4-203ENST00000409938 FAM184AQ8NB25 1140 aa9.46□□□□□ -0.9
EPHA4-203ENST00000409938 NGDNQ8NEJ9 315 aaKnown RBP9.46□□□□□ -0.9
EPHA4-203ENST00000409938 HYPKQ9NX55 129 aa9.46□□□□□ -0.9
EPHA4-203ENST00000409938 JCADQ9P266 1359 aa9.46□□□□□ -0.9
EPHA4-203ENST00000409938 AK2P54819 239 aa9.46□□□□□ -0.9
EPHA4-203ENST00000409938 NLRP6P59044 892 aa9.46□□□□□ -0.9
EPHA4-203ENST00000409938 FOXD4L5Q5VV16 416 aaPredicted RBP9.46□□□□□ -0.9
EPHA4-203ENST00000409938 FOXD4L4Q8WXT5 416 aaPredicted RBP9.46□□□□□ -0.9
EPHA4-203ENST00000409938 TM6SF1Q9BZW5 370 aa9.46□□□□□ -0.9
EPHA4-203ENST00000409938 PHF14O94880 888 aa9.45□□□□□ -0.9
EPHA4-203ENST00000409938 XPCQ01831 940 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-203ENST00000409938 ST3GAL1Q11201 340 aa9.45□□□□□ -0.9
EPHA4-203ENST00000409938 NECTIN2Q92692 538 aa9.45□□□□□ -0.9
EPHA4-203ENST00000409938 LIMCH1Q9UPQ0 1083 aa9.45□□□□□ -0.9
EPHA4-203ENST00000409938 EID1Q9Y6B2 187 aa9.45□□□□□ -0.9
EPHA4-203ENST00000409938 SURF6O75683 361 aaKnown RBP9.45□□□□□ -0.9
EPHA4-203ENST00000409938 CCDC183Q5T5S1 534 aa9.45□□□□□ -0.9
EPHA4-203ENST00000409938 IP6K1Q92551 441 aa9.45□□□□□ -0.9
EPHA4-203ENST00000409938 UTYO14607 1347 aa9.45□□□□□ -0.9
EPHA4-203ENST00000409938 SYT1P21579 422 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 CNTROBQ8N137 903 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 ZSWIM6Q9HCJ5 1215 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 C5P01031 1676 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 UBE2HP62256 183 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 PLPPR3Q6T4P5 718 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 DNAAF4Q8WXU2 420 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 PXDNQ92626 1479 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 TRPM3Q9HCF6 1732 aaPredicted RBP9.44□□□□□ -0.9
EPHA4-203ENST00000409938 SRGAP3O43295 1099 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 LETM1O95202 739 aaPredicted RBP9.44□□□□□ -0.9
EPHA4-203ENST00000409938 LARGE1O95461 756 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 F13A1P00488 732 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 HSP90AB4PQ58FF6 505 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 VPS53Q5VIR6 699 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 CHPF2Q9P2E5 772 aa9.44□□□□□ -0.9
EPHA4-203ENST00000409938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.44□□□□□ -0.9
EPHA4-203ENST00000409938 STX6O43752 255 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms