RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 DLG5Q8TDM6 1919 aa23.51■■□□□ 1.35
LSM5-204ENST00000409909 CANXP27824 592 aaKnown RBP23.5■■□□□ 1.35
LSM5-204ENST00000409909 USPL1Q5W0Q7 1092 aa23.5■■□□□ 1.35
LSM5-204ENST00000409909 COL15A1P39059 1388 aa23.5■■□□□ 1.35
LSM5-204ENST00000409909 ZPR1O75312 459 aa23.49■■□□□ 1.35
LSM5-204ENST00000409909 NEFMP07197 916 aa23.49■■□□□ 1.35
LSM5-204ENST00000409909 ZEB1P37275 1124 aaPredicted RBP23.49■■□□□ 1.35
LSM5-204ENST00000409909 TEX13AQ9BXU3 409 aaPredicted RBP23.49■■□□□ 1.35
LSM5-204ENST00000409909 PARP3Q9Y6F1 533 aa23.49■■□□□ 1.35
LSM5-204ENST00000409909 KIF13BQ9NQT8 1826 aa23.48■■□□□ 1.35
LSM5-204ENST00000409909 EIF5P55010 431 aaKnown RBP23.48■■□□□ 1.35
LSM5-204ENST00000409909 DDR1Q08345 913 aa23.48■■□□□ 1.35
LSM5-204ENST00000409909 NFE2L2Q16236 605 aa23.48■■□□□ 1.35
LSM5-204ENST00000409909 NARFQ9UHQ1 456 aa23.48■■□□□ 1.35
LSM5-204ENST00000409909 TM4SF1P30408 202 aa23.47■■□□□ 1.35
LSM5-204ENST00000409909 PNNQ9H307 717 aaKnown RBP23.47■■□□□ 1.35
LSM5-204ENST00000409909 WWC3Q9ULE0 1092 aa23.47■■□□□ 1.35
LSM5-204ENST00000409909 GRIN3BO60391 1043 aa23.46■■□□□ 1.35
LSM5-204ENST00000409909 TAF7Q15545 349 aaPredicted RBP23.46■■□□□ 1.35
LSM5-204ENST00000409909 C10orf71Q711Q0 1435 aa23.46■■□□□ 1.35
LSM5-204ENST00000409909 BCL2L12Q9HB09 334 aa23.46■■□□□ 1.35
LSM5-204ENST00000409909 MIS18AQ9NYP9 233 aa23.46■■□□□ 1.35
LSM5-204ENST00000409909 PRAMEF22A3QJZ6 481 aa23.45■■□□□ 1.34
LSM5-204ENST00000409909 A1BGP04217 495 aa23.45■■□□□ 1.34
LSM5-204ENST00000409909 PRKRIP1Q9H875 184 aaPredicted RBP23.45■■□□□ 1.34
LSM5-204ENST00000409909 USP16Q9Y5T5 823 aa23.45■■□□□ 1.34
LSM5-204ENST00000409909 KIAA1551Q9HCM1 1747 aa23.45■■□□□ 1.34
LSM5-204ENST00000409909 PXDNLA1KZ92 1463 aa23.44■■□□□ 1.34
LSM5-204ENST00000409909 MAPK8IP3Q9UPT6 1336 aa23.44■■□□□ 1.34
LSM5-204ENST00000409909 POLRMTO00411 1230 aaKnown RBP23.44■■□□□ 1.34
LSM5-204ENST00000409909 THUMPD2Q9BTF0 503 aaKnown RBP23.44■■□□□ 1.34
LSM5-204ENST00000409909 A0A0G2JLW4 131 aa23.43■■□□□ 1.34
LSM5-204ENST00000409909 TGFB2P61812 414 aa23.43■■□□□ 1.34
LSM5-204ENST00000409909 N4BP2Q86UW6 1770 aaPredicted RBP23.42■■□□□ 1.34
LSM5-204ENST00000409909 SNRPA1P09661 255 aaKnown RBP23.41■■□□□ 1.34
LSM5-204ENST00000409909 IL6STP40189 918 aaPredicted RBP23.41■■□□□ 1.34
LSM5-204ENST00000409909 NFIXQ14938 502 aa23.41■■□□□ 1.34
LSM5-204ENST00000409909 A0A087WZG4 1122 aa23.4■■□□□ 1.34
LSM5-204ENST00000409909 DPEP1P16444 411 aa23.4■■□□□ 1.34
LSM5-204ENST00000409909 ZNF784Q8NCA9 323 aaPredicted RBP23.4■■□□□ 1.34
LSM5-204ENST00000409909 TBC1D2BQ9UPU7 963 aa23.4■■□□□ 1.34
LSM5-204ENST00000409909 ZNF330Q9Y3S2 320 aaPredicted RBP23.4■■□□□ 1.34
LSM5-204ENST00000409909 PIP4K2AP48426 406 aaPredicted RBP23.39■■□□□ 1.33
LSM5-204ENST00000409909 KCNA3P22001 575 aa23.38■■□□□ 1.33
LSM5-204ENST00000409909 RIPK4P57078 832 aa23.38■■□□□ 1.33
LSM5-204ENST00000409909 CCDC146Q8IYE0 955 aa23.38■■□□□ 1.33
LSM5-204ENST00000409909 KDM3BQ7LBC6 1761 aa23.37■■□□□ 1.33
LSM5-204ENST00000409909 TMPOP42166 694 aaKnown RBP23.37■■□□□ 1.33
LSM5-204ENST00000409909 PNISRQ8TF01 805 aaKnown RBP23.37■■□□□ 1.33
LSM5-204ENST00000409909 ADAMTS8Q9UP79 889 aa23.37■■□□□ 1.33
LSM5-204ENST00000409909 AFDNP55196 1824 aaKnown RBP23.36■■□□□ 1.33
LSM5-204ENST00000409909 NBPF26B4DH59 902 aa23.35■■□□□ 1.33
LSM5-204ENST00000409909 WDR43Q15061 677 aaKnown RBP eCLIP23.35■■□□□ 1.33
LSM5-204ENST00000409909 NBPF10Q6P3W6 841 aaKnown RBP23.35■■□□□ 1.33
LSM5-204ENST00000409909 NBPF15Q8N660 670 aa23.35■■□□□ 1.33
LSM5-204ENST00000409909 NRXN2Q9P2S2 1712 aa23.34■■□□□ 1.33
LSM5-204ENST00000409909 CAMTA2O94983 1202 aa23.34■■□□□ 1.33
LSM5-204ENST00000409909 SERPINB2P05120 415 aa23.34■■□□□ 1.33
LSM5-204ENST00000409909 EIF4A1P60842 406 aaKnown RBP23.34■■□□□ 1.33
LSM5-204ENST00000409909 TBC1D9BQ66K14 1250 aa23.34■■□□□ 1.33
LSM5-204ENST00000409909 BICDL1Q6ZP65 573 aa23.34■■□□□ 1.33
LSM5-204ENST00000409909 RRP7AQ9Y3A4 280 aaKnown RBP23.34■■□□□ 1.33
LSM5-204ENST00000409909 SCN7AQ01118 1682 aa23.34■■□□□ 1.33
LSM5-204ENST00000409909 BRCA1P38398 1863 aaKnown RBP23.33■■□□□ 1.33
LSM5-204ENST00000409909 GIGYF1O75420 1035 aaPredicted RBP23.33■■□□□ 1.33
LSM5-204ENST00000409909 BCS1LQ9Y276 419 aa23.33■■□□□ 1.33
LSM5-204ENST00000409909 CHRNA5P30532 468 aa23.32■■□□□ 1.32
LSM5-204ENST00000409909 DZIP3Q86Y13 1208 aaKnown RBP23.32■■□□□ 1.32
LSM5-204ENST00000409909 RUNDC1Q96C34 613 aa23.32■■□□□ 1.32
LSM5-204ENST00000409909 NEUROD2Q15784 382 aa23.31■■□□□ 1.32
LSM5-204ENST00000409909 NPM2Q86SE8 214 aaKnown RBP23.31■■□□□ 1.32
LSM5-204ENST00000409909 ZNF316A6NFI3 1004 aaPredicted RBP23.29■■□□□ 1.32
LSM5-204ENST00000409909 PIM2Q9P1W9 311 aa23.29■■□□□ 1.32
LSM5-204ENST00000409909 TRIM35Q9UPQ4 493 aa23.29■■□□□ 1.32
LSM5-204ENST00000409909 LAMB4A4D0S4 1761 aa23.28■■□□□ 1.32
LSM5-204ENST00000409909 BCORQ6W2J9 1755 aa23.28■■□□□ 1.32
LSM5-204ENST00000409909 LMOD3Q0VAK6 560 aa23.28■■□□□ 1.32
LSM5-204ENST00000409909 TSPYL4Q9UJ04 414 aa23.28■■□□□ 1.32
LSM5-204ENST00000409909 CARMIL3Q8ND23 1372 aa23.27■■□□□ 1.32
LSM5-204ENST00000409909 CCDC184Q52MB2 194 aa23.25■■□□□ 1.31
LSM5-204ENST00000409909 DALRD3Q5D0E6 543 aaKnown RBP23.25■■□□□ 1.31
LSM5-204ENST00000409909 CLEC4GQ6UXB4 293 aa23.25■■□□□ 1.31
LSM5-204ENST00000409909 SETDB2Q96T68 719 aa23.25■■□□□ 1.31
LSM5-204ENST00000409909 BABAM1Q9NWV8 329 aa23.25■■□□□ 1.31
LSM5-204ENST00000409909 PRR5LQ6MZQ0 368 aa23.24■■□□□ 1.31
LSM5-204ENST00000409909 ARHGAP27Q6ZUM4 889 aa23.24■■□□□ 1.31
LSM5-204ENST00000409909 CCDC24Q8N4L8 307 aa23.24■■□□□ 1.31
LSM5-204ENST00000409909 ARFGEF1Q9Y6D6 1849 aa23.24■■□□□ 1.31
LSM5-204ENST00000409909 ADCY9O60503 1353 aa23.23■■□□□ 1.31
LSM5-204ENST00000409909 ANKRD31Q8N7Z5 1873 aa23.22■■□□□ 1.31
LSM5-204ENST00000409909 C2CD5Q86YS7 1000 aa23.22■■□□□ 1.31
LSM5-204ENST00000409909 NGEFQ8N5V2 710 aa23.22■■□□□ 1.31
LSM5-204ENST00000409909 ATP10DQ9P241 1426 aa23.22■■□□□ 1.31
LSM5-204ENST00000409909 CHL1O00533 1208 aa23.21■■□□□ 1.31
LSM5-204ENST00000409909 HLFQ16534 295 aa23.21■■□□□ 1.31
LSM5-204ENST00000409909 BRIP1Q9BX63 1249 aa23.21■■□□□ 1.31
LSM5-204ENST00000409909 RGL2O15211 777 aa23.2■■□□□ 1.3
LSM5-204ENST00000409909 MYL6BP14649 208 aa23.2■■□□□ 1.3
LSM5-204ENST00000409909 ZNF652Q9Y2D9 606 aa23.2■■□□□ 1.3
LSM5-204ENST00000409909 DLEC1Q9Y238 1755 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms