RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PCNTO95613 3336 aa17.26■□□□□ 0.35
CHRNA1-205ENST00000409542 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
CHRNA1-205ENST00000409542 FSTL1Q12841 308 aa17.25■□□□□ 0.35
CHRNA1-205ENST00000409542 SLC39A6Q13433 755 aa17.25■□□□□ 0.35
CHRNA1-205ENST00000409542 MORC1Q86VD1 984 aa17.25■□□□□ 0.35
CHRNA1-205ENST00000409542 KDM2BQ8NHM5 1336 aa17.25■□□□□ 0.35
CHRNA1-205ENST00000409542 AFDNP55196 1824 aaKnown RBP17.25■□□□□ 0.35
CHRNA1-205ENST00000409542 JMYQ8N9B5 988 aa17.24■□□□□ 0.35
CHRNA1-205ENST00000409542 SOS1Q07889 1333 aaPredicted RBP17.24■□□□□ 0.35
CHRNA1-205ENST00000409542 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
CHRNA1-205ENST00000409542 SLC52A2Q9HAB3 445 aa17.24■□□□□ 0.35
CHRNA1-205ENST00000409542 ZPR1O75312 459 aa17.23■□□□□ 0.35
CHRNA1-205ENST00000409542 NFIXQ14938 502 aa17.23■□□□□ 0.35
CHRNA1-205ENST00000409542 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
CHRNA1-205ENST00000409542 BCL2L12Q9HB09 334 aa17.23■□□□□ 0.35
CHRNA1-205ENST00000409542 TNRC6CQ9HCJ0 1690 aaKnown RBP17.22■□□□□ 0.35
CHRNA1-205ENST00000409542 RNMTO43148 476 aaKnown RBP17.21■□□□□ 0.35
CHRNA1-205ENST00000409542 ZBTB1Q9Y2K1 713 aa17.21■□□□□ 0.35
CHRNA1-205ENST00000409542 NRXN2Q9P2S2 1712 aa17.21■□□□□ 0.34
CHRNA1-205ENST00000409542 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
CHRNA1-205ENST00000409542 VIRMAQ69YN4 1812 aaKnown RBP17.2■□□□□ 0.34
CHRNA1-205ENST00000409542 SERPINB2P05120 415 aa17.19■□□□□ 0.34
CHRNA1-205ENST00000409542 COL15A1P39059 1388 aa17.19■□□□□ 0.34
CHRNA1-205ENST00000409542 EIF4G2P78344 907 aaKnown RBP eCLIP17.19■□□□□ 0.34
CHRNA1-205ENST00000409542 CARMIL3Q8ND23 1372 aa17.19■□□□□ 0.34
CHRNA1-205ENST00000409542 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
CHRNA1-205ENST00000409542 HMOX1P09601 288 aa17.18■□□□□ 0.34
CHRNA1-205ENST00000409542 SMC1BQ8NDV3 1235 aa17.18■□□□□ 0.34
CHRNA1-205ENST00000409542 GTF3C3Q9Y5Q9 886 aa17.18■□□□□ 0.34
CHRNA1-205ENST00000409542 CCDC88AQ3V6T2 1871 aa17.18■□□□□ 0.34
CHRNA1-205ENST00000409542 MRC1P22897 1456 aa17.18■□□□□ 0.34
CHRNA1-205ENST00000409542 GLTPD2A6NH11 291 aa17.18■□□□□ 0.34
CHRNA1-205ENST00000409542 LMNB1P20700 586 aa17.18■□□□□ 0.34
CHRNA1-205ENST00000409542 DLEC1Q9Y238 1755 aa17.17■□□□□ 0.34
CHRNA1-205ENST00000409542 POTECB2RU33 542 aa17.17■□□□□ 0.34
CHRNA1-205ENST00000409542 MTHFSDQ2M296 383 aaKnown RBP17.17■□□□□ 0.34
CHRNA1-205ENST00000409542 TTLL6Q8N841 843 aa17.17■□□□□ 0.34
CHRNA1-205ENST00000409542 NFKBIEO00221 500 aa17.16■□□□□ 0.34
CHRNA1-205ENST00000409542 CAPN15O75808 1086 aa17.16■□□□□ 0.34
CHRNA1-205ENST00000409542 BICDL1Q6ZP65 573 aa17.16■□□□□ 0.34
CHRNA1-205ENST00000409542 C2CD5Q86YS7 1000 aa17.16■□□□□ 0.34
CHRNA1-205ENST00000409542 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
CHRNA1-205ENST00000409542 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
CHRNA1-205ENST00000409542 KNSTRNQ9Y448 316 aa17.15■□□□□ 0.34
CHRNA1-205ENST00000409542 VEGFAP15692 232 aaPredicted RBP17.14■□□□□ 0.33
CHRNA1-205ENST00000409542 CCDC24Q8N4L8 307 aa17.14■□□□□ 0.33
CHRNA1-205ENST00000409542 TIAM2Q8IVF5 1701 aa17.14■□□□□ 0.33
CHRNA1-205ENST00000409542 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
CHRNA1-205ENST00000409542 ANKRD31Q8N7Z5 1873 aa17.13■□□□□ 0.33
CHRNA1-205ENST00000409542 EIF5P55010 431 aaKnown RBP17.12■□□□□ 0.33
CHRNA1-205ENST00000409542 TBC1D9BQ66K14 1250 aa17.12■□□□□ 0.33
CHRNA1-205ENST00000409542 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
CHRNA1-205ENST00000409542 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
CHRNA1-205ENST00000409542 H0YIN7 160 aa17.12■□□□□ 0.33
CHRNA1-205ENST00000409542 TNS4Q8IZW8 715 aa17.12■□□□□ 0.33
CHRNA1-205ENST00000409542 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
CHRNA1-205ENST00000409542 C21orf2O43822 256 aa17.1■□□□□ 0.33
CHRNA1-205ENST00000409542 HSPA1AP0DMV8 641 aaKnown RBP17.1■□□□□ 0.33
CHRNA1-205ENST00000409542 HSPA1BP0DMV9 641 aaKnown RBP17.1■□□□□ 0.33
CHRNA1-205ENST00000409542 ZNF622Q969S3 477 aaKnown RBP eCLIP17.1■□□□□ 0.33
CHRNA1-205ENST00000409542 TBC1D2BQ9UPU7 963 aa17.09■□□□□ 0.33
CHRNA1-205ENST00000409542 COL11A2P13942 1736 aaPredicted RBP17.08■□□□□ 0.33
CHRNA1-205ENST00000409542 PRR5LQ6MZQ0 368 aa17.08■□□□□ 0.32
CHRNA1-205ENST00000409542 ZNF496Q96IT1 587 aaPredicted RBP17.08■□□□□ 0.32
CHRNA1-205ENST00000409542 FER1L6Q2WGJ9 1857 aa17.08■□□□□ 0.32
CHRNA1-205ENST00000409542 POTEIP0CG38 1075 aa17.07■□□□□ 0.32
CHRNA1-205ENST00000409542 POTEJP0CG39 1038 aa17.07■□□□□ 0.32
CHRNA1-205ENST00000409542 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
CHRNA1-205ENST00000409542 DICER1Q9UPY3 1922 aaKnown RBP17.07■□□□□ 0.32
CHRNA1-205ENST00000409542 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
CHRNA1-205ENST00000409542 STARD3NLO95772 234 aa17.06■□□□□ 0.32
CHRNA1-205ENST00000409542 BRIP1Q9BX63 1249 aa17.06■□□□□ 0.32
CHRNA1-205ENST00000409542 HEG1Q9ULI3 1381 aa17.06■□□□□ 0.32
CHRNA1-205ENST00000409542 A0A087WZG4 1122 aa17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 PER1O15534 1290 aaPredicted RBP17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 A1BGP04217 495 aa17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 ERFEQ4G0M1 354 aa17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 TTC5Q8N0Z6 440 aa17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 KIF7Q2M1P5 1343 aa17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 SCN7AQ01118 1682 aa17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 KCNQ3O43525 872 aa17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 DDNO94850 711 aaPredicted RBP17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 DPY19L2Q6NUT2 758 aa17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 ZNF790Q6PG37 636 aa17.05■□□□□ 0.32
CHRNA1-205ENST00000409542 PDE6BP35913 854 aa17.04■□□□□ 0.32
CHRNA1-205ENST00000409542 SIPA1L3O60292 1781 aaPredicted RBP17.03■□□□□ 0.32
CHRNA1-205ENST00000409542 CAMTA2O94983 1202 aa17.03■□□□□ 0.32
CHRNA1-205ENST00000409542 COL3A1P02461 1466 aaPredicted RBP17.03■□□□□ 0.32
CHRNA1-205ENST00000409542 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
CHRNA1-205ENST00000409542 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.32
CHRNA1-205ENST00000409542 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
CHRNA1-205ENST00000409542 MKRN1Q9UHC7 482 aaKnown RBP17.02■□□□□ 0.32
CHRNA1-205ENST00000409542 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
CHRNA1-205ENST00000409542 TEFQ10587 303 aa17.01■□□□□ 0.31
CHRNA1-205ENST00000409542 CNGB1Q14028 1251 aaPredicted RBP17.01■□□□□ 0.31
CHRNA1-205ENST00000409542 PRAMEF22A3QJZ6 481 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms