RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 FILIP1Q7Z7B0 1213 aa6.91□□□□□ -1.3
R3HDM1-202ENST00000409478 CACTINQ8WUQ7 758 aaKnown RBP6.91□□□□□ -1.3
R3HDM1-202ENST00000409478 CBX8Q9HC52 389 aa6.91□□□□□ -1.3
R3HDM1-202ENST00000409478 CASQ1P31415 396 aa6.91□□□□□ -1.3
R3HDM1-202ENST00000409478 GTF2A1P52655 376 aaPredicted RBP6.91□□□□□ -1.3
R3HDM1-202ENST00000409478 NRBP1Q9UHY1 535 aa6.91□□□□□ -1.3
R3HDM1-202ENST00000409478 KIF1BO60333 1816 aa6.91□□□□□ -1.3
R3HDM1-202ENST00000409478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.91□□□□□ -1.3
R3HDM1-202ENST00000409478 PNPLA6Q8IY17 1366 aa6.91□□□□□ -1.3
R3HDM1-202ENST00000409478 ANO6Q4KMQ2 910 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 NOM1Q5C9Z4 860 aaKnown RBP6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 CERS3Q8IU89 383 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 FANCAO15360 1455 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 LRRC7Q96NW7 1537 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 DHX16O60231 1041 aaKnown RBP6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 PNMA6AP0CW24 399 aaPredicted RBP6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 SRPK2P78362 688 aaKnown RBP6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 NFE2L2Q16236 605 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 TPRNQ4KMQ1 711 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 AXDND1Q5T1B0 1012 aaPredicted RBP6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 TMCO3Q6UWJ1 677 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 KRBA2Q6ZNG9 492 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 TSPYL6Q8N831 410 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 GTF3C6Q969F1 213 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 TNMDQ9H2S6 317 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 DDX19AQ9NUU7 478 aaKnown RBP6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 ZFYVE9O95405 1425 aa6.9□□□□□ -1.3
R3HDM1-202ENST00000409478 ZNF853P0CG23 659 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 MLECQ14165 292 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 SARM1Q6SZW1 724 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 SECISBP2LQ93073 1101 aaKnown RBP6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 MRFAP1L1Q96HT8 127 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 SLC26A8Q96RN1 970 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 UPF3BQ9BZI7 483 aaKnown RBP6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 L2HGDHQ9H9P8 463 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 LIMCH1Q9UPQ0 1083 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 TRAK1Q9UPV9 953 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 TPM1P09493 284 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 CHGAP10645 457 aaKnown RBP6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 CHMLP26374 656 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 HSPA4P34932 840 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 CLCN6P51797 869 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 DNM1Q05193 864 aaKnown RBP6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 LMOD3Q0VAK6 560 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 ICE2Q659A1 982 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 SYT10Q6XYQ8 523 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 VWDEQ8N2E2 1590 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 ANKRD26Q9UPS8 1709 aa6.9□□□□□ -1.31
R3HDM1-202ENST00000409478 GLI2P10070 1586 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 MYO1CO00159 1063 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 SKILP12757 684 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 PLA2G4AP47712 749 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 KRT85P78386 507 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 RBM43Q6ZSC3 357 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 AK7Q96M32 723 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 MBIPQ9NS73 344 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 LRRFIP2Q9Y608 721 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 ERBB3P21860 1342 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 APBB1O00213 710 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 ZSCAN26Q16670 478 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 CCAR2Q8N163 923 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 GOLGA5Q8TBA6 731 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 CLGNO14967 610 aa6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 DHX8Q14562 1220 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 MYCBPQ99417 103 aaPredicted RBP6.89□□□□□ -1.31
R3HDM1-202ENST00000409478 GOLGA6L19H0YKK7 550 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 ZRANB2O95218 330 aaKnown RBP eCLIP6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 PRKAR2BP31323 418 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 ZNF165P49910 485 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 CCDC144BQ3MJ40 725 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 CCDC144CPQ8IYA2 1237 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 CCDC191Q8NCU4 936 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 NEK11Q8NG66 645 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 C14orf93Q9H972 538 aaKnown RBP6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 POLKQ9UBT6 870 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 AATKQ6ZMQ8 1374 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 ADGRB1O14514 1584 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 TCHHQ07283 1943 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 GOLGA6L4A6NEF3 574 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 GSDMDP57764 484 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 PSD3Q9NYI0 1048 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 MTMR6Q9Y217 621 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 KIAA0232Q92628 1395 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 USP27XA6NNY8 438 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 SNW1Q13573 536 aaKnown RBP6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 ERCC6LQ2NKX8 1250 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 ZSCAN31Q96LW9 406 aaPredicted RBP6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 TTC14Q96N46 770 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 SRRTQ9BXP5 876 aaKnown RBP6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 CLSTN2Q9H4D0 955 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 ESF1Q9H501 851 aaKnown RBP6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 CPSF1Q10570 1443 aaKnown RBP6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 AOX1Q06278 1338 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 TTC21BQ7Z4L5 1316 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 MSH6P52701 1360 aa6.88□□□□□ -1.31
R3HDM1-202ENST00000409478 TULP4Q9NRJ4 1543 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 SRLQ86TD4 932 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 C10orf67Q8IYJ2 551 aa6.87□□□□□ -1.31
R3HDM1-202ENST00000409478 IQUBQ8NA54 791 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms