RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 CCDC96Q2M329 555 aa29.37■■■□□ 2.29
SPIRE1-202ENST00000409402 HMGB1P09429 215 aaKnown RBP29.36■■■□□ 2.29
SPIRE1-202ENST00000409402 ST5P78524 1137 aa29.35■■■□□ 2.29
SPIRE1-202ENST00000409402 ZNF213O14771 459 aa29.35■■■□□ 2.29
SPIRE1-202ENST00000409402 LDHCP07864 332 aa29.35■■■□□ 2.29
SPIRE1-202ENST00000409402 TTF1Q15361 905 aaPredicted RBP29.34■■■□□ 2.29
SPIRE1-202ENST00000409402 NOM1Q5C9Z4 860 aaKnown RBP29.34■■■□□ 2.29
SPIRE1-202ENST00000409402 LDHAL6AQ6ZMR3 332 aa29.34■■■□□ 2.29
SPIRE1-202ENST00000409402 CUL5Q93034 780 aa29.34■■■□□ 2.29
SPIRE1-202ENST00000409402 PLCH2O75038 1416 aa29.33■■■□□ 2.29
SPIRE1-202ENST00000409402 PIK3R4Q99570 1358 aa29.32■■■□□ 2.28
SPIRE1-202ENST00000409402 DESP17661 470 aa29.32■■■□□ 2.28
SPIRE1-202ENST00000409402 SPC24Q8NBT2 197 aa29.32■■■□□ 2.28
SPIRE1-202ENST00000409402 ZCRB1Q8TBF4 217 aaKnown RBP29.32■■■□□ 2.28
SPIRE1-202ENST00000409402 ZNF622Q969S3 477 aaKnown RBP eCLIP29.32■■■□□ 2.28
SPIRE1-202ENST00000409402 TRIM21P19474 475 aaKnown RBP29.31■■■□□ 2.28
SPIRE1-202ENST00000409402 NUP62CLQ9H1M0 184 aa29.31■■■□□ 2.28
SPIRE1-202ENST00000409402 SLC12A7Q9Y666 1083 aa29.31■■■□□ 2.28
SPIRE1-202ENST00000409402 PAXIP1Q6ZW49 1069 aaPredicted RBP29.31■■■□□ 2.28
SPIRE1-202ENST00000409402 CIZ1Q9ULV3 898 aaPredicted RBP29.31■■■□□ 2.28
SPIRE1-202ENST00000409402 PPP4R3AQ6IN85 833 aa29.31■■■□□ 2.28
SPIRE1-202ENST00000409402 SEPT11Q9NVA2 429 aaKnown RBP29.31■■■□□ 2.28
SPIRE1-202ENST00000409402 ERLIN2O94905 339 aa29.3■■■□□ 2.28
SPIRE1-202ENST00000409402 ATP5J2-PTCD1G3V325 749 aa29.3■■■□□ 2.28
SPIRE1-202ENST00000409402 NBPF6Q5VWK0 638 aa29.29■■■□□ 2.28
SPIRE1-202ENST00000409402 SPTY2D1Q68D10 685 aaPredicted RBP29.29■■■□□ 2.28
SPIRE1-202ENST00000409402 NBPF5PQ86XG9 351 aaPredicted RBP29.29■■■□□ 2.28
SPIRE1-202ENST00000409402 NBPF4Q96M43 638 aa29.29■■■□□ 2.28
SPIRE1-202ENST00000409402 SCLT1Q96NL6 688 aa29.29■■■□□ 2.28
SPIRE1-202ENST00000409402 EHMT1Q9H9B1 1298 aa29.29■■■□□ 2.28
SPIRE1-202ENST00000409402 CCDC83Q8IWF9 413 aa29.29■■■□□ 2.28
SPIRE1-202ENST00000409402 GPATCH8Q9UKJ3 1502 aaKnown RBP29.29■■■□□ 2.28
SPIRE1-202ENST00000409402 PPP1R12BO60237 982 aaPredicted RBP29.28■■■□□ 2.28
SPIRE1-202ENST00000409402 BAG3O95817 575 aa29.28■■■□□ 2.28
SPIRE1-202ENST00000409402 WDR78Q5VTH9 848 aa29.28■■■□□ 2.28
SPIRE1-202ENST00000409402 A2MP01023 1474 aa29.28■■■□□ 2.28
SPIRE1-202ENST00000409402 THOC2Q8NI27 1593 aaKnown RBP29.28■■■□□ 2.28
SPIRE1-202ENST00000409402 PHAXQ9H814 394 aaKnown RBP29.27■■■□□ 2.28
SPIRE1-202ENST00000409402 RPRD2Q5VT52 1461 aaKnown RBP29.27■■■□□ 2.28
SPIRE1-202ENST00000409402 EVI5LQ96CN4 794 aa29.27■■■□□ 2.28
SPIRE1-202ENST00000409402 SMTNL1A8MU46 457 aa29.27■■■□□ 2.28
SPIRE1-202ENST00000409402 IBSPP21815 317 aaPredicted RBP29.27■■■□□ 2.28
SPIRE1-202ENST00000409402 UBE3BQ7Z3V4 1068 aa29.27■■■□□ 2.28
SPIRE1-202ENST00000409402 CCDC152Q4G0S7 254 aa29.27■■■□□ 2.28
SPIRE1-202ENST00000409402 CCDC181Q5TID7 509 aa29.26■■■□□ 2.28
SPIRE1-202ENST00000409402 UPF3BQ9BZI7 483 aaKnown RBP29.26■■■□□ 2.27
SPIRE1-202ENST00000409402 SH2B1Q9NRF2 756 aaPredicted RBP29.26■■■□□ 2.27
SPIRE1-202ENST00000409402 C11orf95C9JLR9 678 aaPredicted RBP29.26■■■□□ 2.27
SPIRE1-202ENST00000409402 MBIPQ9NS73 344 aa29.26■■■□□ 2.27
SPIRE1-202ENST00000409402 RAPGEF6Q8TEU7 1601 aa29.26■■■□□ 2.27
SPIRE1-202ENST00000409402 RAB34Q9BZG1 259 aa29.26■■■□□ 2.27
SPIRE1-202ENST00000409402 DNAI2Q9GZS0 605 aa29.26■■■□□ 2.27
SPIRE1-202ENST00000409402 RIMS2Q9UQ26 1411 aa29.25■■■□□ 2.27
SPIRE1-202ENST00000409402 DUOX2Q9NRD8 1548 aa29.25■■■□□ 2.27
SPIRE1-202ENST00000409402 ZNF518AQ6AHZ1 1483 aa29.25■■■□□ 2.27
SPIRE1-202ENST00000409402 IFIT3O14879 490 aaKnown RBP29.25■■■□□ 2.27
SPIRE1-202ENST00000409402 CATIPQ7Z7H3 387 aa29.25■■■□□ 2.27
SPIRE1-202ENST00000409402 SMARCC1Q92922 1105 aaPredicted RBP29.25■■■□□ 2.27
SPIRE1-202ENST00000409402 PI4KAP2A4QPH2 592 aa29.25■■■□□ 2.27
SPIRE1-202ENST00000409402 PI4KAP1Q8N8J0 262 aa29.25■■■□□ 2.27
SPIRE1-202ENST00000409402 ECHDC1Q9NTX5 307 aa29.25■■■□□ 2.27
SPIRE1-202ENST00000409402 C8orf76Q96K31 380 aa29.24■■■□□ 2.27
SPIRE1-202ENST00000409402 CHMP4BP1P59074 171 aa29.24■■■□□ 2.27
SPIRE1-202ENST00000409402 ANKRD13DQ6ZTN6 518 aa29.24■■■□□ 2.27
SPIRE1-202ENST00000409402 FEZ1Q99689 392 aa29.24■■■□□ 2.27
SPIRE1-202ENST00000409402 CABP5Q9NP86 173 aa29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 HLA-DOAP06340 250 aa29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 ATP6V1AP38606 617 aa29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 DISP3Q9P2K9 1392 aa29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 SSRP1Q08945 709 aaKnown RBP29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 C8orf37Q96NL8 207 aa29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 FAM83GA6ND36 823 aa29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 TMEM266Q2M3C6 531 aa29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 PPIP5K1Q6PFW1 1433 aa29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 GOLGA8AA7E2F4 631 aa29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 GOLGA8BA8MQT2 603 aa29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 GOLIM4O00461 696 aa29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 EIF5P55010 431 aaKnown RBP29.23■■■□□ 2.27
SPIRE1-202ENST00000409402 IL16Q14005 1332 aa29.22■■■□□ 2.27
SPIRE1-202ENST00000409402 MYO1BO43795 1136 aa29.22■■■□□ 2.27
SPIRE1-202ENST00000409402 TRIM27P14373 513 aa29.22■■■□□ 2.27
SPIRE1-202ENST00000409402 SKIDA1Q1XH10 827 aa29.21■■■□□ 2.27
SPIRE1-202ENST00000409402 ACSBG1Q96GR2 724 aa29.21■■■□□ 2.27
SPIRE1-202ENST00000409402 POTEJP0CG39 1038 aa29.21■■■□□ 2.27
SPIRE1-202ENST00000409402 PDE4BQ07343 736 aa29.21■■■□□ 2.27
SPIRE1-202ENST00000409402 UQCRFS1P1P0C7P4 283 aa29.2■■■□□ 2.27
SPIRE1-202ENST00000409402 GSTO1P78417 241 aa29.2■■■□□ 2.27
SPIRE1-202ENST00000409402 SETDB2Q96T68 719 aa29.2■■■□□ 2.27
SPIRE1-202ENST00000409402 WDR7Q9Y4E6 1490 aa29.2■■■□□ 2.27
SPIRE1-202ENST00000409402 DDB1Q16531 1140 aa29.2■■■□□ 2.27
SPIRE1-202ENST00000409402 CCDC194A0A1B0GVG4 234 aa29.2■■■□□ 2.27
SPIRE1-202ENST00000409402 ATP10BO94823 1461 aa29.2■■■□□ 2.26
SPIRE1-202ENST00000409402 NLRP5P59047 1200 aa29.19■■■□□ 2.26
SPIRE1-202ENST00000409402 HMGN5P82970 282 aaKnown RBP29.19■■■□□ 2.26
SPIRE1-202ENST00000409402 FERMT3Q86UX7 667 aa29.19■■■□□ 2.26
SPIRE1-202ENST00000409402 CCDC82Q8N4S0 544 aa29.19■■■□□ 2.26
SPIRE1-202ENST00000409402 BIVM-ERCC5R4GMW8 1640 aa29.19■■■□□ 2.26
SPIRE1-202ENST00000409402 TSG101Q99816 390 aa29.18■■■□□ 2.26
SPIRE1-202ENST00000409402 CCDC12Q8WUD4 166 aaPredicted RBP29.18■■■□□ 2.26
SPIRE1-202ENST00000409402 NEBLO76041 1014 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms