RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 RRAGCQ9HB90 399 aa17.96■□□□□ 0.47
TUBA3D-202ENST00000409047 CCDC88AQ3V6T2 1871 aa17.96■□□□□ 0.47
TUBA3D-202ENST00000409047 CYP19A1P11511 503 aaPredicted RBP17.95■□□□□ 0.46
TUBA3D-202ENST00000409047 RASSF7Q02833 373 aa17.95■□□□□ 0.46
TUBA3D-202ENST00000409047 NFIXQ14938 502 aa17.95■□□□□ 0.46
TUBA3D-202ENST00000409047 SLC52A2Q9HAB3 445 aa17.95■□□□□ 0.46
TUBA3D-202ENST00000409047 KDM2BQ8NHM5 1336 aa17.95■□□□□ 0.46
TUBA3D-202ENST00000409047 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
TUBA3D-202ENST00000409047 SLC39A6Q13433 755 aa17.94■□□□□ 0.46
TUBA3D-202ENST00000409047 AKAP4Q5JQC9 854 aa17.94■□□□□ 0.46
TUBA3D-202ENST00000409047 MORC1Q86VD1 984 aa17.94■□□□□ 0.46
TUBA3D-202ENST00000409047 COL13A1Q5TAT6 717 aaPredicted RBP17.93■□□□□ 0.46
TUBA3D-202ENST00000409047 ZBTB1Q9Y2K1 713 aa17.93■□□□□ 0.46
TUBA3D-202ENST00000409047 RNMTO43148 476 aaKnown RBP17.92■□□□□ 0.46
TUBA3D-202ENST00000409047 EIF4G2P78344 907 aaKnown RBP eCLIP17.92■□□□□ 0.46
TUBA3D-202ENST00000409047 C16orf71Q8IYS4 520 aaPredicted RBP17.92■□□□□ 0.46
TUBA3D-202ENST00000409047 NARFQ9UHQ1 456 aa17.92■□□□□ 0.46
TUBA3D-202ENST00000409047 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
TUBA3D-202ENST00000409047 CLSPNQ9HAW4 1339 aa17.92■□□□□ 0.46
TUBA3D-202ENST00000409047 TIAM2Q8IVF5 1701 aa17.92■□□□□ 0.46
TUBA3D-202ENST00000409047 COL15A1P39059 1388 aa17.91■□□□□ 0.46
TUBA3D-202ENST00000409047 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
TUBA3D-202ENST00000409047 ZPR1O75312 459 aa17.91■□□□□ 0.46
TUBA3D-202ENST00000409047 AMER1Q5JTC6 1135 aaPredicted RBP17.91■□□□□ 0.46
TUBA3D-202ENST00000409047 ZC3H4Q9UPT8 1303 aaKnown RBP17.91■□□□□ 0.46
TUBA3D-202ENST00000409047 NFKBIEO00221 500 aa17.88■□□□□ 0.45
TUBA3D-202ENST00000409047 SERPINB2P05120 415 aa17.88■□□□□ 0.45
TUBA3D-202ENST00000409047 MTHFSDQ2M296 383 aaKnown RBP17.88■□□□□ 0.45
TUBA3D-202ENST00000409047 SMC1BQ8NDV3 1235 aa17.88■□□□□ 0.45
TUBA3D-202ENST00000409047 COL11A2P13942 1736 aaPredicted RBP17.87■□□□□ 0.45
TUBA3D-202ENST00000409047 GLTPD2A6NH11 291 aa17.87■□□□□ 0.45
TUBA3D-202ENST00000409047 POTECB2RU33 542 aa17.87■□□□□ 0.45
TUBA3D-202ENST00000409047 HMOX1P09601 288 aa17.87■□□□□ 0.45
TUBA3D-202ENST00000409047 LMNB1P20700 586 aa17.87■□□□□ 0.45
TUBA3D-202ENST00000409047 DICER1Q9UPY3 1922 aaKnown RBP17.87■□□□□ 0.45
TUBA3D-202ENST00000409047 FER1L6Q2WGJ9 1857 aa17.86■□□□□ 0.45
TUBA3D-202ENST00000409047 VSIG10Q8N0Z9 540 aa17.86■□□□□ 0.45
TUBA3D-202ENST00000409047 SCN7AQ01118 1682 aa17.86■□□□□ 0.45
TUBA3D-202ENST00000409047 SIPA1L3O60292 1781 aaPredicted RBP17.86■□□□□ 0.45
TUBA3D-202ENST00000409047 EIF5P55010 431 aaKnown RBP17.85■□□□□ 0.45
TUBA3D-202ENST00000409047 TTLL6Q8N841 843 aa17.85■□□□□ 0.45
TUBA3D-202ENST00000409047 KNSTRNQ9Y448 316 aa17.85■□□□□ 0.45
TUBA3D-202ENST00000409047 C2CD5Q86YS7 1000 aa17.84■□□□□ 0.45
TUBA3D-202ENST00000409047 VEGFAP15692 232 aaPredicted RBP17.83■□□□□ 0.44
TUBA3D-202ENST00000409047 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
TUBA3D-202ENST00000409047 CANXP27824 592 aaKnown RBP17.82■□□□□ 0.44
TUBA3D-202ENST00000409047 TBC1D9BQ66K14 1250 aa17.82■□□□□ 0.44
TUBA3D-202ENST00000409047 PER1O15534 1290 aaPredicted RBP17.81■□□□□ 0.44
TUBA3D-202ENST00000409047 SLX4Q8IY92 1834 aa17.8■□□□□ 0.44
TUBA3D-202ENST00000409047 H0YIN7 160 aa17.8■□□□□ 0.44
TUBA3D-202ENST00000409047 BICDL1Q6ZP65 573 aa17.8■□□□□ 0.44
TUBA3D-202ENST00000409047 ZNF496Q96IT1 587 aaPredicted RBP17.8■□□□□ 0.44
TUBA3D-202ENST00000409047 PCGF6Q9BYE7 350 aa17.8■□□□□ 0.44
TUBA3D-202ENST00000409047 KIF7Q2M1P5 1343 aa17.79■□□□□ 0.44
TUBA3D-202ENST00000409047 IL17REQ8NFR9 667 aa17.79■□□□□ 0.44
TUBA3D-202ENST00000409047 CACNA1SQ13698 1873 aa17.79■□□□□ 0.44
TUBA3D-202ENST00000409047 HEG1Q9ULI3 1381 aa17.79■□□□□ 0.44
TUBA3D-202ENST00000409047 HSPA1AP0DMV8 641 aaKnown RBP17.78■□□□□ 0.44
TUBA3D-202ENST00000409047 HSPA1BP0DMV9 641 aaKnown RBP17.78■□□□□ 0.44
TUBA3D-202ENST00000409047 PRR5LQ6MZQ0 368 aa17.78■□□□□ 0.44
TUBA3D-202ENST00000409047 CCDC24Q8N4L8 307 aa17.78■□□□□ 0.44
TUBA3D-202ENST00000409047 BCORQ6W2J9 1755 aa17.78■□□□□ 0.44
TUBA3D-202ENST00000409047 ARFGEF2Q9Y6D5 1785 aa17.78■□□□□ 0.44
TUBA3D-202ENST00000409047 DIAPH1O60610 1272 aaKnown RBP17.77■□□□□ 0.44
TUBA3D-202ENST00000409047 BRIP1Q9BX63 1249 aa17.77■□□□□ 0.44
TUBA3D-202ENST00000409047 C21orf2O43822 256 aa17.76■□□□□ 0.43
TUBA3D-202ENST00000409047 STARD3NLO95772 234 aa17.76■□□□□ 0.43
TUBA3D-202ENST00000409047 ZNF790Q6PG37 636 aa17.76■□□□□ 0.43
TUBA3D-202ENST00000409047 TNS4Q8IZW8 715 aa17.76■□□□□ 0.43
TUBA3D-202ENST00000409047 TBC1D2BQ9UPU7 963 aa17.76■□□□□ 0.43
TUBA3D-202ENST00000409047 A0A087WZG4 1122 aa17.75■□□□□ 0.43
TUBA3D-202ENST00000409047 LTBP3Q9NS15 1303 aa17.74■□□□□ 0.43
TUBA3D-202ENST00000409047 CAPN15O75808 1086 aa17.74■□□□□ 0.43
TUBA3D-202ENST00000409047 CAMTA2O94983 1202 aa17.74■□□□□ 0.43
TUBA3D-202ENST00000409047 POTEIP0CG38 1075 aa17.74■□□□□ 0.43
TUBA3D-202ENST00000409047 POTEJP0CG39 1038 aa17.74■□□□□ 0.43
TUBA3D-202ENST00000409047 IL6STP40189 918 aaPredicted RBP17.74■□□□□ 0.43
TUBA3D-202ENST00000409047 ERFEQ4G0M1 354 aa17.74■□□□□ 0.43
TUBA3D-202ENST00000409047 ZNF622Q969S3 477 aaKnown RBP eCLIP17.74■□□□□ 0.43
TUBA3D-202ENST00000409047 CEMIPQ8WUJ3 1361 aa17.74■□□□□ 0.43
TUBA3D-202ENST00000409047 KCNQ3O43525 872 aa17.73■□□□□ 0.43
TUBA3D-202ENST00000409047 A1BGP04217 495 aa17.73■□□□□ 0.43
TUBA3D-202ENST00000409047 PDE6BP35913 854 aa17.73■□□□□ 0.43
TUBA3D-202ENST00000409047 CC2D1BQ5T0F9 858 aaKnown RBP17.73■□□□□ 0.43
TUBA3D-202ENST00000409047 TTC5Q8N0Z6 440 aa17.73■□□□□ 0.43
TUBA3D-202ENST00000409047 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
TUBA3D-202ENST00000409047 PDZRN3Q9UPQ7 1066 aa17.73■□□□□ 0.43
TUBA3D-202ENST00000409047 SRGNP10124 158 aa17.72■□□□□ 0.43
TUBA3D-202ENST00000409047 GNAT3A8MTJ3 354 aa17.71■□□□□ 0.43
TUBA3D-202ENST00000409047 DDNO94850 711 aaPredicted RBP17.71■□□□□ 0.43
TUBA3D-202ENST00000409047 DPY19L2Q6NUT2 758 aa17.71■□□□□ 0.43
TUBA3D-202ENST00000409047 TEX13AQ9BXU3 409 aaPredicted RBP17.71■□□□□ 0.43
TUBA3D-202ENST00000409047 STYK1Q6J9G0 422 aa17.7■□□□□ 0.42
TUBA3D-202ENST00000409047 PRPF40BQ6NWY9 871 aaKnown RBP17.7■□□□□ 0.42
TUBA3D-202ENST00000409047 C7orf43Q8WVR3 580 aa17.7■□□□□ 0.42
TUBA3D-202ENST00000409047 TAOK3Q9H2K8 898 aa17.7■□□□□ 0.42
TUBA3D-202ENST00000409047 NPC1L1Q9UHC9 1359 aa17.69■□□□□ 0.42
TUBA3D-202ENST00000409047 TEFQ10587 303 aa17.69■□□□□ 0.42
TUBA3D-202ENST00000409047 CHADLQ6NUI6 762 aa17.69■□□□□ 0.42
TUBA3D-202ENST00000409047 CNBD1Q8NA66 436 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms